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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1541436..1544935- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005091-T1 ID=KJC3_005091-T1|Name=KJC3_005091-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3500bp|location=Sequence derived from alignment at ch4:1541436..1544935- (Aspergillus niger KJC3)
GAACTTCACAGGCGACCTCAGCTCCTCCAAGAGCTTTCCACCTTCCCCGC
CACCTCCGTTTCAAGAAGAGCCTCTATGGCCGCATCAGCCTCGAGGTGCC
ATTGAAATCTCAGAACCCCGCCGCGCCTTTACCTTAGCCTCCGGGCTCAT
CATCCTCGACCATGGCCTCTCTGCTCCGGCGGCCTGGCAACCTTGCTCGA
TATTCGAGGAGAGCCGCAGACTGCCTTTACCGCACAAGGCCGCTCTCTGC
ACACGCTCCGCAGTCGAGACTGTCAGCCCTGATTATCGCGCACCGAGCCA
GGACGTTCGCTACTCAACCCACCGGTGGTCCGACCCCCCCGAACGACAAT
GGCAACAACAAGAACTCGAGCTCATCAACCGGGCCCGGGAATAATGGCGG
AGACCCGAAGAAGCCGGAAGAGGAGAATGTGCTCACCAAGGAACAACAGA
AACATCTAGATGAATTCATCGCACATCTGAAAGAACGGTCACCACGGAGT
CAACATGAGATGCTCGACGACGTGAAACTGCATATCGAGAGGAACGGATT
ACCTCCGCCAGTGAAGGATTTCATCGACAATCATATCTCCACCGGGCGTC
CTGCCTCCCTCATGACATACATGCGTTTGATGCGCGACCTAGCCAGTTAC
CTCGATGATATCGCTCGTGGCGTAGCGCGGATCGAAAACGAGCGATTGAT
GAAGGAAATTGAGGAACTAGAGAAGAAGAATGCAGAGGAAGGAGAGCAAC
CAGGGAAAGAGGGGGAGAAGAAGGATCAGGAAGGAAAGAAGAAGGACCAA
GAACAAGATAAGCAGCGGAAGGACCAGAAGGACCAAAACCCATTCGGCAA
GAATCCGGGAGACCCTCGAGATATGATTGTTTTCAAGCTCGACAACATAT
ATTTCTGGGCGGGCTTGATTGTCAGTTACTATATCTACCGCAGTTTCTAC
CCGAGCGAAAACAGCAGCGATATCACATGGCAGGAGTTCCGGGCCAACTT
CCTCGACAGGGGCTTAGTTGAGAGGCTGACCGTCATTAACAACACCCGGG
TTCGGGTAGAACTTCACCGTGATGCGGTGGCTCAAGTCTACCCCGAGTCG
CCTGCTGCTCATCCGGGATTCTACTACTACTTCACCATCGGATCCGTCGA
CGGCTTTGAGAGGAAATTGGAGGAGGCCCAGCAGGAACTTGGTGTCCCTA
GTGCTGAACGCATTCCGGTCAACTACCAGGGTGAAGTCCCCTGGGCTGCG
ACACTCATAAGCTTCGGTCCCACGGTTCTTCTTTTGGCTGGTGTATATTT
CCTGTCGAGACGTGCAGGTAGCGGAGGTGGTCAGGGTGGCATCTTTGGCA
TTGGCAAGAGCCGTGCCAAACGTTTCAACCAAGAGACCGACATCAAGATC
AAATTCTCCGACGTGGCTGGTATGGATGAAGCTAAGGTGGAAATCATGGA
ATTCGTCAGCTTCCTGAAGAACCCGGAACGCTTCCAGAAGCTGGGTGCCA
AAATCCCCCGTGGTGCCATTCTTTCGGGTCCTCCGGGTACCGGTAAGACG
TTACTTGCCAAGGCCACGGCTGGTGAATCCGGCGTGCCCTTCTTCAGTGT
CAGTGGTTCGGAGTTTGTCGAGATGTTTGTCGGTGTTGGTCCTTCCCGAG
TTCGTGATCTGTTCGCCAACGCGCGGAAATCGACGCCCTGCATTATCTTC
ATCGATGAAATTGATGCTATCGGTAAATCAAGAGCGAAGTCGAACTACGG
CGGCGGTAACGATGAACGCGAGAGCACCCTGAACCAGATCCTTACCGAAA
TGGATGGTTTCAACACTTCCGAGCAAGTGGTGGTGTTGGCTGGTACGAAC
AGACCCGACGTTCTCGATCAGGCTCTGATGCGTCCTGGACGATTCGATCG
GCACATCTCTATCGACCGGCCTACCATGGATGGCCGTAAGCAGATCTTCG
GCGTTCACTTGAAGAAGATCGTGACGAAGGAGGACATGGAATACCTTCAA
GGAAGACTTTCGGCCTTGACACCCGGTTTTGCTGGTGCTGATATCGCAAA
CTGCGTTAACGAAGCCGCTCTGGTTGGTATGTATAGAAATCCCTTGCAGA
AGAGATGATCTCCCTATATTATTATCCCTATACTAACCAGCTTCTGTACA
GCGGCCCGTGAAAACGCCGATCATGTCACCATGAAGCACTTCGAGCAGGC
CATTGAACGTGTCATCGGTGGCTTGGAGAAGAAGTCTCTTGTGCTTTCAC
CCGAGGAGAAGCGTGTTGTGGCCTACCACGAGGCCGGACATGCCATTTGT
GGATGGTACTTCCGCTGGGCTGATCCTCTTCTCAAGGTTTCCATCATCCC
CCGTGGCCAAGGCGCTCTGGGTTATGCCCAATATCTGCCCGCCAACGGCG
ACACCTACTTGATGAACGGAAACCAGCTCATGGACCGTATGGCCATGACC
CTGGGAGGACGTGTCAGCGAGGAACTGCACTTCGACACAGTCACTAGCGG
AGCCAGCGACGACTTCAACAAGGTCACTCAGATGGCCACCGCCATGGTGA
CCAAGTTCGGTATGTCATCAAAGCTACGCTACATCTACTACGAGGAGGAC
CCGAAGAGCCAGATGCACAAGCCCTTCTCCGAAGAAACGGCTCGGGATAT
CGACGGTGAAGTCCGCCGCATCATCGACCAGGCCCACAAGCAGTGCCACG
ATCTCCTGACCAAGAAGAAGAAGGAAGTCGGCATCGTAGCCGAGGAACTC
CTCTCCAAGGAGGTCCTCAGCCGCGACGACATGATCCGTCTTCTCGGCCC
GAGAGAATGGCCCGAATCCAACGAGTTCGCCAAGTACTTCGACGGCCGCG
GCGGCGCCACCATCGCTCCCCCTGAGCCCACGGAATCCACTGAAGGCAAG
GACGGCCGCGACTCCACCCCTATCCCCCCCTAGATGATGCAAATCCCGAT
TGGAAAATCCTCGAATACTATTCATCTCTCCCAAGAACATCACTCACGGC
TGACGAAAGGTGCGGCGAGGCGGGGGTTTTTGCATGCATGTCTTCTTATT
CATATCATATATCGTTGTCCTTTTTTACTTCCTCGTTTCCTTGCTTGGGT
TTTGTATTTATTTATCTTGTGTGTCAACTCGGAGCATCTCCTTTCTAACA
ATTTCCCTCTGTTTACGCATTTCATCCATCCCATCCGTCTGCTGTTTGTT
ACCTTCCAAGTTGTCGCCATAAATATTAGGACTATGACCTTTTTTGGTGT
TTCCTGCGTGCTTGGTACTTTGCTCCGGAGTTCCCTCCCCAACTTCTCTA
CTCCTTTCCCCGTCCCCCTCTGACATCTATCCCAGCGGGCAATTATTCGT
CCCTTTGATATCTCTATCATCACTGTCTCGCTTCTCCCCTTCTCTTCCCT
CGTTCGCTTTCTTGAGGAAAGCGTTCGGTGTATTGTATTGTACTGTATAG
TAGGTAGTTATTTTATATTGGTGTTCTTCATATATAGATGGTAGGCAGGT
back to topCoding sequence (CDS) from alignment at ch4:1541436..1544935- >KJC3_005091-T1 ID=KJC3_005091-T1|Name=KJC3_005091-T1|organism=Aspergillus niger KJC3|type=CDS|length=5394bp|location=Sequence derived from alignment at ch4:1541436..1544935- (Aspergillus niger KJC3)
CGGCCCGTGAAAACGCCGATCATGTCACCATGAAGCACTTCGAGCAGGCC
ATTGAACGTGTCATCGGTGGCTTGGAGAAGAAGTCTCTTGTGCTTTCACC
CGAGGAGAAGCGTGTTGTGGCCTACCACGAGGCCGGACATGCCATTTGTG
GATGGTACTTCCGCTGGGCTGATCCTCTTCTCAAGGTTTCCATCATCCCC
CGTGGCCAAGGCGCTCTGGGTTATGCCCAATATCTGCCCGCCAACGGCGA
CACCTACTTGATGAACGGAAACCAGCTCATGGACCGTATGGCCATGACCC
TGGGAGGACGTGTCAGCGAGGAACTGCACTTCGACACAGTCACTAGCGGA
GCCAGCGACGACTTCAACAAGGTCACTCAGATGGCCACCGCCATGGTGAC
CAAGTTCGGTATGTCATCAAAGCTACGCTACATCTACTACGAGGAGGACC
CGAAGAGCCAGATGCACAAGCCCTTCTCCGAAGAAACGGCTCGGGATATC
GACGGTGAAGTCCGCCGCATCATCGACCAGGCCCACAAGCAGTGCCACGA
TCTCCTGACCAAGAAGAAGAAGGAAGTCGGCATCGTAGCCGAGGAACTCC
TCTCCAAGGAGGTCCTCAGCCGCGACGACATGATCCGTCTTCTCGGCCCG
AGAGAATGGCCCGAATCCAACGAGTTCGCCAAGTACTTCGACGGCCGCGG
CGGCGCCACCATCGCTCCCCCTGAGCCCACGGAATCCACTGAAGGCAAGG
ACGGCCGCGACTCCACCCCTATCCCCCCCTAGATGGCCTCTCTGCTCCGG
CGGCCTGGCAACCTTGCTCGATATTCGAGGAGAGCCGCAGACTGCCTTTA
CCGCACAAGGCCGCTCTCTGCACACGCTCCGCAGTCGAGACTGTCAGCCC
TGATTATCGCGCACCGAGCCAGGACGTTCGCTACTCAACCCACCGGTGGT
CCGACCCCCCCGAACGACAATGGCAACAACAAGAACTCGAGCTCATCAAC
CGGGCCCGGGAATAATGGCGGAGACCCGAAGAAGCCGGAAGAGGAGAATG
TGCTCACCAAGGAACAACAGAAACATCTAGATGAATTCATCGCACATCTG
AAAGAACGGTCACCACGGAGTCAACATGAGATGCTCGACGACGTGAAACT
GCATATCGAGAGGAACGGATTACCTCCGCCAGTGAAGGATTTCATCGACA
ATCATATCTCCACCGGGCGTCCTGCCTCCCTCATGACATACATGCGTTTG
ATGCGCGACCTAGCCAGTTACCTCGATGATATCGCTCGTGGCGTAGCGCG
GATCGAAAACGAGCGATTGATGAAGGAAATTGAGGAACTAGAGAAGAAGA
ATGCAGAGGAAGGAGAGCAACCAGGGAAAGAGGGGGAGAAGAAGGATCAG
GAAGGAAAGAAGAAGGACCAAGAACAAGATAAGCAGCGGAAGGACCAGAA
GGACCAAAACCCATTCGGCAAGAATCCGGGAGACCCTCGAGATATGATTG
TTTTCAAGCTCGACAACATATATTTCTGGGCGGGCTTGATTGTCAGTTAC
TATATCTACCGCAGTTTCTACCCGAGCGAAAACAGCAGCGATATCACATG
GCAGGAGTTCCGGGCCAACTTCCTCGACAGGGGCTTAGTTGAGAGGCTGA
CCGTCATTAACAACACCCGGGTTCGGGTAGAACTTCACCGTGATGCGGTG
GCTCAAGTCTACCCCGAGTCGCCTGCTGCTCATCCGGGATTCTACTACTA
CTTCACCATCGGATCCGTCGACGGCTTTGAGAGGAAATTGGAGGAGGCCC
AGCAGGAACTTGGTGTCCCTAGTGCTGAACGCATTCCGGTCAACTACCAG
GGTGAAGTCCCCTGGGCTGCGACACTCATAAGCTTCGGTCCCACGGTTCT
TCTTTTGGCTGGTGTATATTTCCTGTCGAGACGTGCAGGTAGCGGAGGTG
GTCAGGGTGGCATCTTTGGCATTGGCAAGAGCCGTGCCAAACGTTTCAAC
CAAGAGACCGACATCAAGATCAAATTCTCCGACGTGGCTGGTATGGATGA
AGCTAAGGTGGAAATCATGGAATTCGTCAGCTTCCTGAAGAACCCGGAAC
GCTTCCAGAAGCTGGGTGCCAAAATCCCCCGTGGTGCCATTCTTTCGGGT
CCTCCGGGTACCGGTAAGACGTTACTTGCCAAGGCCACGGCTGGTGAATC
CGGCGTGCCCTTCTTCAGTGTCAGTGGTTCGGAGTTTGTCGAGATGTTTG
TCGGTGTTGGTCCTTCCCGAGTTCGTGATCTGTTCGCCAACGCGCGGAAA
TCGACGCCCTGCATTATCTTCATCGATGAAATTGATGCTATCGGTAAATC
AAGAGCGAAGTCGAACTACGGCGGCGGTAACGATGAACGCGAGAGCACCC
TGAACCAGATCCTTACCGAAATGGATGGTTTCAACACTTCCGAGCAAGTG
GTGGTGTTGGCTGGTACGAACAGACCCGACGTTCTCGATCAGGCTCTGAT
GCGTCCTGGACGATTCGATCGGCACATCTCTATCGACCGGCCTACCATGG
ATGGCCGTAAGCAGATCTTCGGCGTTCACTTGAAGAAGATCGTGACGAAG
GAGGACATGGAATACCTTCAAGGAAGACTTTCGGCCTTGACACCCGGTTT
TGCTGGTGCTGATATCGCAAACTGCGTTAACGAAGCCGCTCTGGTTGCGG
CCCGTGAAAACGCCGATCATGTCACCATGAAGCACTTCGAGCAGGCCATT
GAACGTGTCATCGGTGGCTTGGAGAAGAAGTCTCTTGTGCTTTCACCCGA
GGAGAAGCGTGTTGTGGCCTACCACGAGGCCGGACATGCCATTTGTGGAT
GGTACTTCCGCTGGGCTGATCCTCTTCTCAAGGTTTCCATCATCCCCCGT
GGCCAAGGCGCTCTGGGTTATGCCCAATATCTGCCCGCCAACGGCGACAC
CTACTTGATGAACGGAAACCAGCTCATGGACCGTATGGCCATGACCCTGG
GAGGACGTGTCAGCGAGGAACTGCACTTCGACACAGTCACTAGCGGAGCC
AGCGACGACTTCAACAAGGTCACTCAGATGGCCACCGCCATGGTGACCAA
GTTCGGTATGTCATCAAAGCTACGCTACATCTACTACGAGGAGGACCCGA
AGAGCCAGATGCACAAGCCCTTCTCCGAAGAAACGGCTCGGGATATCGAC
GGTGAAGTCCGCCGCATCATCGACCAGGCCCACAAGCAGTGCCACGATCT
CCTGACCAAGAAGAAGAAGGAAGTCGGCATCGTAGCCGAGGAACTCCTCT
CCAAGGAGGTCCTCAGCCGCGACGACATGATCCGTCTTCTCGGCCCGAGA
GAATGGCCCGAATCCAACGAGTTCGCCAAGTACTTCGACGGCCGCGGCGG
CGCCACCATCGCTCCCCCTGAGCCCACGGAATCCACTGAAGGCAAGGACG
GCCGCGACTCCACCCCTATCCCCCCCTAGATGGCCTCTCTGCTCCGGCGG
CCTGGCAACCTTGCTCGATATTCGAGGAGAGCCGCAGACTGCCTTTACCG
CACAAGGCCGCTCTCTGCACACGCTCCGCAGTCGAGACTGTCAGCCCTGA
TTATCGCGCACCGAGCCAGGACGTTCGCTACTCAACCCACCGGTGGTCCG
ACCCCCCCGAACGACAATGGCAACAACAAGAACTCGAGCTCATCAACCGG
GCCCGGGAATAATGGCGGAGACCCGAAGAAGCCGGAAGAGGAGAATGTGC
TCACCAAGGAACAACAGAAACATCTAGATGAATTCATCGCACATCTGAAA
GAACGGTCACCACGGAGTCAACATGAGATGCTCGACGACGTGAAACTGCA
TATCGAGAGGAACGGATTACCTCCGCCAGTGAAGGATTTCATCGACAATC
ATATCTCCACCGGGCGTCCTGCCTCCCTCATGACATACATGCGTTTGATG
CGCGACCTAGCCAGTTACCTCGATGATATCGCTCGTGGCGTAGCGCGGAT
CGAAAACGAGCGATTGATGAAGGAAATTGAGGAACTAGAGAAGAAGAATG
CAGAGGAAGGAGAGCAACCAGGGAAAGAGGGGGAGAAGAAGGATCAGGAA
GGAAAGAAGAAGGACCAAGAACAAGATAAGCAGCGGAAGGACCAGAAGGA
CCAAAACCCATTCGGCAAGAATCCGGGAGACCCTCGAGATATGATTGTTT
TCAAGCTCGACAACATATATTTCTGGGCGGGCTTGATTGTCAGTTACTAT
ATCTACCGCAGTTTCTACCCGAGCGAAAACAGCAGCGATATCACATGGCA
GGAGTTCCGGGCCAACTTCCTCGACAGGGGCTTAGTTGAGAGGCTGACCG
TCATTAACAACACCCGGGTTCGGGTAGAACTTCACCGTGATGCGGTGGCT
CAAGTCTACCCCGAGTCGCCTGCTGCTCATCCGGGATTCTACTACTACTT
CACCATCGGATCCGTCGACGGCTTTGAGAGGAAATTGGAGGAGGCCCAGC
AGGAACTTGGTGTCCCTAGTGCTGAACGCATTCCGGTCAACTACCAGGGT
GAAGTCCCCTGGGCTGCGACACTCATAAGCTTCGGTCCCACGGTTCTTCT
TTTGGCTGGTGTATATTTCCTGTCGAGACGTGCAGGTAGCGGAGGTGGTC
AGGGTGGCATCTTTGGCATTGGCAAGAGCCGTGCCAAACGTTTCAACCAA
GAGACCGACATCAAGATCAAATTCTCCGACGTGGCTGGTATGGATGAAGC
TAAGGTGGAAATCATGGAATTCGTCAGCTTCCTGAAGAACCCGGAACGCT
TCCAGAAGCTGGGTGCCAAAATCCCCCGTGGTGCCATTCTTTCGGGTCCT
CCGGGTACCGGTAAGACGTTACTTGCCAAGGCCACGGCTGGTGAATCCGG
CGTGCCCTTCTTCAGTGTCAGTGGTTCGGAGTTTGTCGAGATGTTTGTCG
GTGTTGGTCCTTCCCGAGTTCGTGATCTGTTCGCCAACGCGCGGAAATCG
ACGCCCTGCATTATCTTCATCGATGAAATTGATGCTATCGGTAAATCAAG
AGCGAAGTCGAACTACGGCGGCGGTAACGATGAACGCGAGAGCACCCTGA
ACCAGATCCTTACCGAAATGGATGGTTTCAACACTTCCGAGCAAGTGGTG
GTGTTGGCTGGTACGAACAGACCCGACGTTCTCGATCAGGCTCTGATGCG
TCCTGGACGATTCGATCGGCACATCTCTATCGACCGGCCTACCATGGATG
GCCGTAAGCAGATCTTCGGCGTTCACTTGAAGAAGATCGTGACGAAGGAG
GACATGGAATACCTTCAAGGAAGACTTTCGGCCTTGACACCCGGTTTTGC
TGGTGCTGATATCGCAAACTGCGTTAACGAAGCCGCTCTGGTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0004222 | metalloendopeptidase activity |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005091-T1.utr3p1 | KJC3_005091-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005091-T1.utr5p1 | KJC3_005091-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0002605 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR003960 |
| DBxref | InterPro:IPR000642 |
| DBxref | InterPro:IPR011546 |
| DBxref | InterPro:IPR005936 |
| DBxref | InterPro:IPR041569 |
| DBxref | InterPro:IPR037219 |
| DBxref | InterPro:IPR003959 |
| DBxref | InterPro:IPR003593 |
| DBxref | PFAM:PF01434 |
| DBxref | PFAM:PF06480 |
| DBxref | PFAM:PF17862 |
| DBxref | PFAM:PF00004 |
| Product | Mitochondrial inner membrane m-AAA protease component |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1541436..1544935 - |
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