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KJC3_005093-T2, KJC3_005093-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005093-T2
Unique NameKJC3_005093-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1546564..1547128+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005093-T2 ID=KJC3_005093-T2|Name=KJC3_005093-T2|organism=Aspergillus niger KJC3|type=mRNA|length=565bp|location=Sequence derived from alignment at ch4:1546564..1547128+ (Aspergillus niger KJC3)
TGTGTCCTACGACCTTCACTCCATCTACTTCTGAACTAGTCGCTCGACTG
TTTCAAGATGTCTACCATTGCTATCGGTCTTGGTGTCGCTACTGCGGCCT
TCCTGGTAAGTCTGACTTGGGAACTGGGCTGTATCCGCATGCTGGATGAC
ATGAGGCTAATACGTACTTTCATCTGCCAGGGTCGCGCCGGTCTTGTTGC
CTACCGTCGCTCCAAGGGAGGTGTGAACGCCATGGGCAAGGCCTTCTACA
AGGGGTTAGTCATATGCCGTTATATCATGAGTTACCGTCATCGATCGCTA
ACTAGTATTCAGTGGTTTCGAGCAGCGCATGACTCGCCGTGAGGCCGCCT
TGATTCTCGAGCTTCCGTACGTCTCAACCCTTCAGACACGCCATATTTTT
CGATTTTTTTCTAACCAACTATATAGGGAGCGTACCCTGAACAAGGACAA
GGTCCGCAAGAAGCACCGTCAGCTCATGCTGCTCAACCACCCCGATCGTG
GAGGCAGCCCGTACCTGGCGACTAAGATCAACGAGGCCAAGGAGTTCCTC
GACAAACACACTTAA
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Coding sequence (CDS) from alignment at ch4:1546564..1547128+

>KJC3_005093-T2 ID=KJC3_005093-T2|Name=KJC3_005093-T2|organism=Aspergillus niger KJC3|type=CDS|length=900bp|location=Sequence derived from alignment at ch4:1546564..1547128+ (Aspergillus niger KJC3)
ATGTCTACCATTGCTATCGGTCTTGGTGTCGCTACTGCGGCCTTCCTGGT
AAGTCTGACTTGGGAACTGGGCTGTATCCGCATGCTGGATGACATGAGGC
TAATACGTACTTTCATCTGCCAGGGTCGCGCCGGTCTTGTTGCCTACCGT
CGCTCCAAGGGAGGTGTGAACGCCATGGGCAAGGCCTTCTACAAGGGTGG
TTTCGAGCAGCGCATGACTCGCCGTGAGGCCGCCTTGATTCTCGAGCTTC
CGTACGTCTCAACCCTTCAGACACGCCATATTTTTCGATTTTTTTCTAAC
CAACTATATAGGGAGCGTACCCTGAACAAGGACAAGGTCCGCAAGAAGCA
CCGTCAGCTCATGCTGCTCAACCACCCCGATCGTGGAGGCAGCCCGTACC
TGGCGACTAAGATCAACGAGGCCAAGGAGTTCCTCGACAAACACACTTAA
ATGTCTACCATTGCTATCGGTCTTGGTGTCGCTACTGCGGCCTTCCTGGT
AAGTCTGACTTGGGAACTGGGCTGTATCCGCATGCTGGATGACATGAGGC
TAATACGTACTTTCATCTGCCAGGGTCGCGCCGGTCTTGTTGCCTACCGT
CGCTCCAAGGGAGGTGTGAACGCCATGGGCAAGGCCTTCTACAAGGGTGG
TTTCGAGCAGCGCATGACTCGCCGTGAGGCCGCCTTGATTCTCGAGCTTC
CGTACGTCTCAACCCTTCAGACACGCCATATTTTTCGATTTTTTTCTAAC
CAACTATATAGGGAGCGTACCCTGAACAAGGACAAGGTCCGCAAGAAGCA
CCGTCAGCTCATGCTGCTCAACCACCCCGATCGTGGAGGCAGCCCGTACC
TGGCGACTAAGATCAACGAGGCCAAGGAGTTCCTCGACAAACACACTTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PAM18_1KJC3_005093Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005093-T2.utr5p1KJC3_005093-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005093-T2.exon1KJC3_005093-T2.exon1Aspergillus niger KJC3exon
KJC3_005093-T2.exon2KJC3_005093-T2.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005093-T2.cdsKJC3_005093-T2.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005093-T2KJC3_005093-T2-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR001623
DBxrefInterPro:IPR036869
Product variant 2
Productmitochondrial import inner membrane translocase subunit TIM14
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1546564..1547128 +
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