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KJC3_005121-T1, KJC3_005121-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005121-T1
Unique NameKJC3_005121-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1625619..1628439+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005121-T1 ID=KJC3_005121-T1|Name=KJC3_005121-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2821bp|location=Sequence derived from alignment at ch4:1625619..1628439+ (Aspergillus niger KJC3)
CTCTTGCCACTCCGGAGGTTCCCTTAGTCTTGTACTATCATTATATTATC
CATTTCCATTTGTTCTTATTTACGGAAACTGGTAAACTGTAAATCAGAAC
CCAAAGTATTACCTACGGTGGATTTTCTGCCCTACTTGGAGACCTTACCT
ACTACTACTGACTGACTGACCGAGTGGTTGTTGCTCTTACTACGACCACT
GCACCGACTGACTACTTTTTTTATCGGACAATCCAATTCAGTCTACTTCC
TTACTACTTGGCTATCACTACTACTACCACTACTACTATTGCCTCACCGG
CGGACAGACTGAACTGATCCTCTGAACTGACCCTTACTGACTTTGACCTG
CCAATTCGATCCTGATCTGATCTACTCCCTCCCACTTACTACGACCACCA
CTACTTCGTTACTACTATTGCTACTACTACTACTACTACTACTACTACTA
CTACTACTACCACCACCACCACCGCCACTACCAGATCATCCTGCCTATCA
GAAAAAACCCGAGACTCTTCTTCGAACCATGAACTTTGACCAGTAAGCCT
CTCTTTACACTCTCAGTCGGTCTCCATCTCCACTTGTCCTGACCAGAACG
TCTTATCATCGCATCTCCAGTACTCCGTACTATGTCCAGCCTCTGTATCC
TAAGATGCTAGAAAGGTCTTCCTGTGACTGTGCCTAAGCCTGTTTATACT
TACTATCTTTTCCCCTCTCCTTCCCCCTCTCCCCTTCCCCTCCCCTCACC
CTTCACAGCCTCCTCATCGCCCATTCACCTGAGTTACCTCACTCTCCCCC
TCCGTCTCTCTCTCTTTGTCCCTTGACTTTCCTCGCAACCATTCCGACTT
CATATATGCATGTAACAATCCTTCCGACTCTTTCCTTCTTTTCCCGTCAT
CTACCTCATTTCCCTGCGGCGCTACTGCCACGCCGTATGATGCGCCGGTG
TCATCGTCACTTTGGTGTAACCAGGCGCTCGCTTCCCTGAACCTGACCGG
CCAATCTCCACGGAGCGTTCCTTGAGTAGCAGATTTGCTAATCTCATAAG
CATGTGTATCTACAGATGAATCGACGGAACGTGATTGGGATAACTGCGTA
TCATCAGCCATGTCGTAAGTCCCCCCTCGTCCTCCCCAACCCGAAGGTGA
AGCTGGCCTCTGGGACTGCGCAGCGTCGGCAGCAGCTGTCCTTCCATATA
TACTTGGTCTTGAGATACCTCGCGCCCACCCCCCTCAGGTCATGTGCTTG
ACTTGGAGTGTTTCTCTTGTAATTTACTTACTATGCCTTTGTATCCGTTC
CCTCTTTCGGCTATCTTACAGTCCTGTCCGTTCCCTCCACTTGCGATTGA
CAAAGTGACTGGCTCGTTCTATTATTATTGACATTATCGTTCTGGCCTTG
CATTCACTTCTACTTTATCTCCCCCTTCCTTTTTTTTGATTATTTTTCTC
GTGTCTTGGGCTCATCTCTGACACTGGCGCCTTTGGCTTGTCCCTCTACA
ACAGGTCCCCTCCAACATCTAAGCGAATCAAGACTTCCATCTCTGCCAAC
GCGCCATCACACCTGATAGCTCAACAGCAAGTCAATCCCTTTTCAAGAGT
GCCTTCTTTTGAGGGCATTCCTATGCCCCAAACTCAGATTCCTCCCCAAA
ATCCGCGCAAACGCCGTGCTTCCCCCCAGTCAAGCTCTGCGGCTACCATG
GCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAACCGCGCACGAGCAAGG
GCCTGGGGGATCAGAGCCTGCCCCCAAGAAGAAGGGGAGGACCAATACTC
CTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGACTATGCGCGATGCGGGT
CGCACCTGGAGCGAGATTGCCAAGGTCCATAAAGCGCCCCTGCTTCAATA
CCCTCCACTACGTCACGCATGCTGACCTGAAATTCCCGGGTGCTACAGAC
ATTCCCTACCCGGACCGAAGGTAGCGTCAAGAAGCATTGGTACAAGGTAA
GCAGATCCTAGTCGCTCTTTGTCCGAAGACAGGAGAAGATACTTAAGCCA
CGACAGGACATGCACTATGCCGAATTTGCTGAAGATGAGGTAACGACCCT
TGGCATACGACTTTTTTTTTTTTTTTTTTTTTTTGTCAAGCGATGCTAAA
AGGAAGGACAGTCCGTAGCACTCCGAGAAGCGATTAGGGAATACGATGCG
AATAAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCAGCCAAGGTAAC
ATCTCCGGGCCCTGTAGATGCCTTGCTGAGTTGTTGACATGAGTGAATCA
GGCGTGCGAACAGTATGCAAAAGAACATTTCAAGGATCTTTAGATTTCTT
ACGAACTATTGACGACGTGATGACCAATGCATCGTCTTCCGCACATTTAA
CGAATCGACGATGGGCATGAGTTTTGGATTCACATTGCTTTAGGCTGAAG
ATCTCAAGGCAGTGTTCGATGTTAGCCACAATTTGCAAAGTATCGGGCGA
AGGGTTATCGGAGTTGGCTTGCGTCTTTCGTTTTACTTTCTGCTGGTCCC
GTTTGGTCGACTATTTCCCACCTCTTCTTTTTACAAGCGCCTTTCCTGGT
TACTTCGTCTTGTTCCTCGTCCCCTCATATCCTGGGTGAATACCACTGTT
CGTTTCGCGTAACTCCTTGACGGGTCTTTGCAGCAGCTTTTCGCCGCGGA
AGGGACAGCGTACCCTGGACAGAAATTCTGTCGCGCACCCAACAACACGT
TGAAGCTTGCTGTAAGGTTTTCAATTTTTTCTATAGAAAGGAATCTAGTA
GAAGCTTTCTCTCGGTGTCCG
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Coding sequence (CDS) from alignment at ch4:1625619..1628439+

>KJC3_005121-T1 ID=KJC3_005121-T1|Name=KJC3_005121-T1|organism=Aspergillus niger KJC3|type=CDS|length=5592bp|location=Sequence derived from alignment at ch4:1625619..1628439+ (Aspergillus niger KJC3)
ATGAACTTTGACCATACTCCGTACTATGTCCAGCCTCTGTATCCTAAGAT
GCTAGAAAGGTCTTCCTGTGACTATGAATCGACGGAACGTGATTGGGATA
ACTGCGTATCATCAGCCATGTCGTCCCCTCCAACATCTAAGCGAATCAAG
ACTTCCATCTCTGCCAACGCGCCATCACACCTGATAGCTCAACAGCAAGT
CAATCCCTTTTCAAGAGTGCCTTCTTTTGAGGGCATTCCTATGCCCCAAA
CTCAGATTCCTCCCCAAAATCCGCGCAAACGCCGTGCTTCCCCCCAGTCA
AGCTCTGCGGCTACCATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGA
AACCGCGCACGAGCAAGGGCCTGGGGGATCAGAGCCTGCCCCCAAGAAGA
AGGGGAGGACCAATACTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAG
ACTATGCGCGATGCGGGTCGCACCTGGAGCGAGATTGCCAAGACATTCCC
TACCCGGACCGAAGGTAGCGTCAAGAAGCATTGGTACAAGGACATGCACT
ATGCCGAATTTGCTGAAGATGAGTCCGTAGCACTCCGAGAAGCGATTAGG
GAATACGATGCGAATAAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCC
AGCCAAGGCGTGCGAACAGTATGCAAAAGAACATTTCAAGGATCTTTAGA
TGAACTTTGACCATACTCCGTACTATGTCCAGCCTCTGTATCCTAAGATG
CTAGAAAGGTCTTCCTGTGACTATGAATCGACGGAACGTGATTGGGATAA
CTGCGTATCATCAGCCATGTCGTCCCCTCCAACATCTAAGCGAATCAAGA
CTTCCATCTCTGCCAACGCGCCATCACACCTGATAGCTCAACAGCAAGTC
AATCCCTTTTCAAGAGTGCCTTCTTTTGAGGGCATTCCTATGCCCCAAAC
TCAGATTCCTCCCCAAAATCCGCGCAAACGCCGTGCTTCCCCCCAGTCAA
GCTCTGCGGCTACCATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAA
ACCGCGCACGAGCAAGGGCCTGGGGGATCAGAGCCTGCCCCCAAGAAGAA
GGGGAGGACCAATACTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGA
CTATGCGCGATGCGGGTCGCACCTGGAGCGAGATTGCCAAGACATTCCCT
ACCCGGACCGAAGGTAGCGTCAAGAAGCATTGGTACAAGGACATGCACTA
TGCCGAATTTGCTGAAGATGAGTCCGTAGCACTCCGAGAAGCGATTAGGG
AATACGATGCGAATAAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCA
GCCAAGGCGTGCGAACAGTATGCAAAAGAACATTTCAAGGATCTTTAGAT
GAACTTTGACCATACTCCGTACTATGTCCAGCCTCTGTATCCTAAGATGC
TAGAAAGGTCTTCCTGTGACTATGAATCGACGGAACGTGATTGGGATAAC
TGCGTATCATCAGCCATGTCGTCCCCTCCAACATCTAAGCGAATCAAGAC
TTCCATCTCTGCCAACGCGCCATCACACCTGATAGCTCAACAGCAAGTCA
ATCCCTTTTCAAGAGTGCCTTCTTTTGAGGGCATTCCTATGCCCCAAACT
CAGATTCCTCCCCAAAATCCGCGCAAACGCCGTGCTTCCCCCCAGTCAAG
CTCTGCGGCTACCATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAA
CCGCGCACGAGCAAGGGCCTGGGGGATCAGAGCCTGCCCCCAAGAAGAAG
GGGAGGACCAATACTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGAC
TATGCGCGATGCGGGTCGCACCTGGAGCGAGATTGCCAAGACATTCCCTA
CCCGGACCGAAGGTAGCGTCAAGAAGCATTGGTACAAGGACATGCACTAT
GCCGAATTTGCTGAAGATGAGTCCGTAGCACTCCGAGAAGCGATTAGGGA
ATACGATGCGAATAAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCAG
CCAAGGCGTGCGAACAGTATGCAAAAGAACATTTCAAGGATCTTTAGATG
AACTTTGACCATACTCCGTACTATGTCCAGCCTCTGTATCCTAAGATGCT
AGAAAGGTCTTCCTGTGACTATGAATCGACGGAACGTGATTGGGATAACT
GCGTATCATCAGCCATGTCGTCCCCTCCAACATCTAAGCGAATCAAGACT
TCCATCTCTGCCAACGCGCCATCACACCTGATAGCTCAACAGCAAGTCAA
TCCCTTTTCAAGAGTGCCTTCTTTTGAGGGCATTCCTATGCCCCAAACTC
AGATTCCTCCCCAAAATCCGCGCAAACGCCGTGCTTCCCCCCAGTCAAGC
TCTGCGGCTACCATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAAC
CGCGCACGAGCAAGGGCCTGGGGGATCAGAGCCTGCCCCCAAGAAGAAGG
GGAGGACCAATACTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGACT
ATGCGCGATGCGGGTCGCACCTGGAGCGAGATTGCCAAGACATTCCCTAC
CCGGACCGAAGGTAGCGTCAAGAAGCATTGGTACAAGGACATGCACTATG
CCGAATTTGCTGAAGATGAGTCCGTAGCACTCCGAGAAGCGATTAGGGAA
TACGATGCGAATAAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCAGC
CAAGGCGTGCGAACAGTATGCAAAAGAACATTTCAAGGATCTTTAGATGA
ACTTTGACCATACTCCGTACTATGTCCAGCCTCTGTATCCTAAGATGCTA
GAAAGGTCTTCCTGTGACTATGAATCGACGGAACGTGATTGGGATAACTG
CGTATCATCAGCCATGTCGTCCCCTCCAACATCTAAGCGAATCAAGACTT
CCATCTCTGCCAACGCGCCATCACACCTGATAGCTCAACAGCAAGTCAAT
CCCTTTTCAAGAGTGCCTTCTTTTGAGGGCATTCCTATGCCCCAAACTCA
GATTCCTCCCCAAAATCCGCGCAAACGCCGTGCTTCCCCCCAGTCAAGCT
CTGCGGCTACCATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAACC
GCGCACGAGCAAGGGCCTGGGGGATCAGAGCCTGCCCCCAAGAAGAAGGG
GAGGACCAATACTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGACTA
TGCGCGATGCGGGTCGCACCTGGAGCGAGATTGCCAAGACATTCCCTACC
CGGACCGAAGGTAGCGTCAAGAAGCATTGGTACAAGGACATGCACTATGC
CGAATTTGCTGAAGATGAGTCCGTAGCACTCCGAGAAGCGATTAGGGAAT
ACGATGCGAATAAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCAGCC
AAGGCGTGCGAACAGTATGCAAAAGAACATTTCAAGGATCTTTAGATGAA
CTTTGACCATACTCCGTACTATGTCCAGCCTCTGTATCCTAAGATGCTAG
AAAGGTCTTCCTGTGACTATGAATCGACGGAACGTGATTGGGATAACTGC
GTATCATCAGCCATGTCGTCCCCTCCAACATCTAAGCGAATCAAGACTTC
CATCTCTGCCAACGCGCCATCACACCTGATAGCTCAACAGCAAGTCAATC
CCTTTTCAAGAGTGCCTTCTTTTGAGGGCATTCCTATGCCCCAAACTCAG
ATTCCTCCCCAAAATCCGCGCAAACGCCGTGCTTCCCCCCAGTCAAGCTC
TGCGGCTACCATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAACCG
CGCACGAGCAAGGGCCTGGGGGATCAGAGCCTGCCCCCAAGAAGAAGGGG
AGGACCAATACTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGACTAT
GCGCGATGCGGGTCGCACCTGGAGCGAGATTGCCAAGACATTCCCTACCC
GGACCGAAGGTAGCGTCAAGAAGCATTGGTACAAGGACATGCACTATGCC
GAATTTGCTGAAGATGAGTCCGTAGCACTCCGAGAAGCGATTAGGGAATA
CGATGCGAATAAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCAGCCA
AGGCGTGCGAACAGTATGCAAAAGAACATTTCAAGGATCTTTAGATGAAC
TTTGACCATACTCCGTACTATGTCCAGCCTCTGTATCCTAAGATGCTAGA
AAGGTCTTCCTGTGACTATGAATCGACGGAACGTGATTGGGATAACTGCG
TATCATCAGCCATGTCGTCCCCTCCAACATCTAAGCGAATCAAGACTTCC
ATCTCTGCCAACGCGCCATCACACCTGATAGCTCAACAGCAAGTCAATCC
CTTTTCAAGAGTGCCTTCTTTTGAGGGCATTCCTATGCCCCAAACTCAGA
TTCCTCCCCAAAATCCGCGCAAACGCCGTGCTTCCCCCCAGTCAAGCTCT
GCGGCTACCATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAACCGC
GCACGAGCAAGGGCCTGGGGGATCAGAGCCTGCCCCCAAGAAGAAGGGGA
GGACCAATACTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGACTATG
CGCGATGCGGGTCGCACCTGGAGCGAGATTGCCAAGACATTCCCTACCCG
GACCGAAGGTAGCGTCAAGAAGCATTGGTACAAGGACATGCACTATGCCG
AATTTGCTGAAGATGAGTCCGTAGCACTCCGAGAAGCGATTAGGGAATAC
GATGCGAATAAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCAGCCAA
GGCGTGCGAACAGTATGCAAAAGAACATTTCAAGGATCTTTAGATGAACT
TTGACCATACTCCGTACTATGTCCAGCCTCTGTATCCTAAGATGCTAGAA
AGGTCTTCCTGTGACTATGAATCGACGGAACGTGATTGGGATAACTGCGT
ATCATCAGCCATGTCGTCCCCTCCAACATCTAAGCGAATCAAGACTTCCA
TCTCTGCCAACGCGCCATCACACCTGATAGCTCAACAGCAAGTCAATCCC
TTTTCAAGAGTGCCTTCTTTTGAGGGCATTCCTATGCCCCAAACTCAGAT
TCCTCCCCAAAATCCGCGCAAACGCCGTGCTTCCCCCCAGTCAAGCTCTG
CGGCTACCATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAACCGCG
CACGAGCAAGGGCCTGGGGGATCAGAGCCTGCCCCCAAGAAGAAGGGGAG
GACCAATACTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGACTATGC
GCGATGCGGGTCGCACCTGGAGCGAGATTGCCAAGACATTCCCTACCCGG
ACCGAAGGTAGCGTCAAGAAGCATTGGTACAAGGACATGCACTATGCCGA
ATTTGCTGAAGATGAGTCCGTAGCACTCCGAGAAGCGATTAGGGAATACG
ATGCGAATAAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCAGCCAAG
GCGTGCGAACAGTATGCAAAAGAACATTTCAAGGATCTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005121KJC3_005121Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005121-T1KJC3_005121-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005121-T1.utr5p1KJC3_005121-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005121-T1.exon1KJC3_005121-T1.exon1Aspergillus niger KJC3exon
KJC3_005121-T1.exon2KJC3_005121-T1.exon2Aspergillus niger KJC3exon
KJC3_005121-T1.exon3KJC3_005121-T1.exon3Aspergillus niger KJC3exon
KJC3_005121-T1.exon4KJC3_005121-T1.exon4Aspergillus niger KJC3exon
KJC3_005121-T1.exon5KJC3_005121-T1.exon5Aspergillus niger KJC3exon
KJC3_005121-T1.exon6KJC3_005121-T1.exon6Aspergillus niger KJC3exon
KJC3_005121-T1.exon7KJC3_005121-T1.exon7Aspergillus niger KJC3exon
KJC3_005121-T1.exon8KJC3_005121-T1.exon8Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005121-T1.cdsKJC3_005121-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005121-T1.utr3p1KJC3_005121-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017930
DBxrefInterPro:IPR017877
DBxrefInterPro:IPR001005
DBxrefPFAM:PF13921
DBxrefPFAM:PF00249
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1625619..1628439 +
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