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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1675848..1678064+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005135-T1 ID=KJC3_005135-T1|Name=KJC3_005135-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2217bp|location=Sequence derived from alignment at ch4:1675848..1678064+ (Aspergillus niger KJC3)
GTCCAACCTCCCATCTCTCCTCCCCCCATGTTCTATTCTTCTCTGTTCAT
CTGAATTCTCCTCTATCTATTCTCAGAGGGCCTCTCACAACACTATGGCG
CGTGAAGAGCCTCTCTTGGCCTCACGCCCCTCGTCCGACCATTCCTCCAT
TCGGAATGCCGAGGAGGAGGACGCCCTGCTAACCGGGATCCGCACCGACC
GTGACCGACGCCGCAGATGGAGCTTCTGGAAAGAGCTCGGCCTCTTCACC
TGGGCCCTCATTGCTACGGTAGCTGTCATCGTTCTCTCCGTCGTTTACCA
ACATGAATCTAGTCGGGGCCCAGATCGCTCGAAAGATCCCTGGACGAAGC
CGACTGGCAAACGGAACCTTATCTTCATGGTGTCCGACGGCATGGGCCCC
GCTAGTCTGTCCATGACCAGGAGCTACAAACAACTCACACAAGGGCTTCC
CGCTGACGAGGTCCTCATCCTGGACAAGCACTTTGTCGGAACCTCCCGTA
CACGATCGAGCTCCAGCCTTGTGACGGATTCCGCGGCCGGTGCGACGGCA
TTCTCGTGTGGTCATAAGAGCTACAACGGCGCCATCTCCGTGCTTCCTGA
CCATTCGCCTTGTGGCACCGTCCTTGAGGCTGCCTCCTTGGCTGGTTACA
AGACGGGGCTGGTAGTGACGACTCGTATCACCGATGCGACTCCGGCTTGC
TTTGCTTCACATGTGAATCTCCGACAGTACGAAGACCGGATTGCGGAACA
GGAAATCGGGGAGCACCCGCTGGGCCGTGTGGTGGATCTTATCATGGGTG
GAGGCCGGTGTCACTTCTTGCCCAACTCGACTGACGGAAGCTGTCGGGGC
GATGACCGCGACCTTGTCGAGCTGGCGAAGGAGGGTGGATACCATTACAT
GGATGATCGAGCCGGGTTCGACTCTTTGAATGGAGGGACTGAAGGCAAAC
TGCCACTCCTGGGGCTCTTTGCGGAGAAAGACATTCCCTTCGAGATCGAC
CGCCGCAGCCAGAATGACGTGTACCCCTCTCTTGAGGAGATGGCCCGTAC
CGCCTTGACGATACTCAGCCAGGCCACCGCCGACAGTGAGCAGGGTTTCT
TCCTCATGATTGAGGGTTCGCGCATCGACCATGCTGGCCATGGAAACGAC
CCGGCTGCACAGGTCAATGAAGTTTTGGCATATGACAAGGCCTTTGCGGC
CGTGCTGGAGTTCCTAGAGCAGGACTCGACTCCGGGCGTGGTCGTGAGCA
CATCCGACCATGAGACTGGAGGCTTGTCAGTCGCGCGTCAGCTACAGCCT
GAATACCCCGACTACAAATGGCTTCCCGGTGTCCTGGCCAATGCCAGTCA
CTCTTCGGAGTACGTCAACAAGAAGCTAGTGAACTATCTCGCCACTGAAA
CGGACGACAAGAAGCAGTACAAGTTCGTCCGCAGCCTCATTGAGAACGAT
CTTGGCATCACAGATGTCACGGACGAGGAGATTAACGCCGTTCTCGACCC
CAATTACCCATATAACCCCCAGTACGTCTTTGCGGATATTGTCAGCCGCA
GGGCTCAGATTGGTTGGGCGACCCACGGACATTCCGGTATGATACCACCA
TCTATATCAACCCCCTTCGATCACGAGCTAACCTCAGACCAGGTGTCGAT
GTCAACATCTACGCCTCCGGGAAACTCGCGTTTCCCCTAGCAGGCAACCA
CGAGAACACCGAAGTCGGCTCCTTCTTGGCCGACTTCCTAGACCTGGACC
TCAAGAGCACGACCAAAAAGCTTCTCTCATCGGACTACTGGACCATGTCT
TCCGAGGATAGCCCCTATGGCTGGCTCGGCGACCCTCTAGGCGAGGATGT
CCGAACCGAAGGCCTAGACACCTACCACGGCGAGTTCCGCAAGCGCGGAC
TCTCCGAGCGAGGCTGCAGCTGTGGCGAGAGCCACTGAAGCTAATAAATA
CACTTAGTCACGCCCTACATTTGTCACGTCTAAACCTTTACTCATGATTT
ATCCATCCTGCCATCTATACAACCGTTGACAAACGATGATCTAAATTACC
AATGTTGCATAATACTTTGGTGTGGGTGTTCTGGCGTTTAACCACTCAAT
CAGTTCATACGAAATTTTATCAGAATGCTTTTCTTTCCTTGTTCTCTACC
ATAGCCAAGTTCGGCCCACAATTAGCAAAAAAAAACTCGTATAATGCATA
ATACAAGTTATCACTAG back to topCoding sequence (CDS) from alignment at ch4:1675848..1678064+ >KJC3_005135-T1 ID=KJC3_005135-T1|Name=KJC3_005135-T1|organism=Aspergillus niger KJC3|type=CDS|length=1596bp|location=Sequence derived from alignment at ch4:1675848..1678064+ (Aspergillus niger KJC3)
ATGGCGCGTGAAGAGCCTCTCTTGGCCTCACGCCCCTCGTCCGACCATTC
CTCCATTCGGAATGCCGAGGAGGAGGACGCCCTGCTAACCGGGATCCGCA
CCGACCGTGACCGACGCCGCAGATGGAGCTTCTGGAAAGAGCTCGGCCTC
TTCACCTGGGCCCTCATTGCTACGGTAGCTGTCATCGTTCTCTCCGTCGT
TTACCAACATGAATCTAGTCGGGGCCCAGATCGCTCGAAAGATCCCTGGA
CGAAGCCGACTGGCAAACGGAACCTTATCTTCATGGTGTCCGACGGCATG
GGCCCCGCTAGTCTGTCCATGACCAGGAGCTACAAACAACTCACACAAGG
GCTTCCCGCTGACGAGGTCCTCATCCTGGACAAGCACTTTGTCGGAACCT
CCCGTACACGATCGAGCTCCAGCCTTGTGACGGATTCCGCGGCCGGTGCG
ACGGCATTCTCGTGTGGTCATAAGAGCTACAACGGCGCCATCTCCGTGCT
TCCTGACCATTCGCCTTGTGGCACCGTCCTTGAGGCTGCCTCCTTGGCTG
GTTACAAGACGGGGCTGGTAGTGACGACTCGTATCACCGATGCGACTCCG
GCTTGCTTTGCTTCACATGTGAATCTCCGACAGTACGAAGACCGGATTGC
GGAACAGGAAATCGGGGAGCACCCGCTGGGCCGTGTGGTGGATCTTATCA
TGGGTGGAGGCCGGTGTCACTTCTTGCCCAACTCGACTGACGGAAGCTGT
CGGGGCGATGACCGCGACCTTGTCGAGCTGGCGAAGGAGGGTGGATACCA
TTACATGGATGATCGAGCCGGGTTCGACTCTTTGAATGGAGGGACTGAAG
GCAAACTGCCACTCCTGGGGCTCTTTGCGGAGAAAGACATTCCCTTCGAG
ATCGACCGCCGCAGCCAGAATGACGTGTACCCCTCTCTTGAGGAGATGGC
CCGTACCGCCTTGACGATACTCAGCCAGGCCACCGCCGACAGTGAGCAGG
GTTTCTTCCTCATGATTGAGGGTTCGCGCATCGACCATGCTGGCCATGGA
AACGACCCGGCTGCACAGGTCAATGAAGTTTTGGCATATGACAAGGCCTT
TGCGGCCGTGCTGGAGTTCCTAGAGCAGGACTCGACTCCGGGCGTGGTCG
TGAGCACATCCGACCATGAGACTGGAGGCTTGTCAGTCGCGCGTCAGCTA
CAGCCTGAATACCCCGACTACAAATGGCTTCCCGGTGTCCTGGCCAATGC
CAGTCACTCTTCGGAGTACGTCAACAAGAAGCTAGTGAACTATCTCGCCA
CTGAAACGGACGACAAGAAGCAGTACAAGTTCGTCCGCAGCCTCATTGAG
AACGATCTTGGCATCACAGATGTCACGGACGAGGAGATTAACGCCGTTCT
CGACCCCAATTACCCATATAACCCCCAGTACGTCTTTGCGGATATTGTCA
GCCGCAGGGCTCAGATTGGTTGGGCGACCCACGGACATTCCGGTATGATA
CCACCATCTATATCAACCCCCTTCGATCACGAGCTAACCTCAGACCAGGT
GTCGATGTCAACATCTACGCCTCCGGGAAACTCGCGTTTCCCCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0016791 | phosphatase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005135-T1.utr5p1 | KJC3_005135-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005135-T1.utr3p1 | KJC3_005135-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018299 |
| DBxref | InterPro:IPR017850 |
| DBxref | InterPro:IPR001952 |
| DBxref | PFAM:PF00245 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1675848..1678064 + |
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