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KJC3_005136-T2, KJC3_005136-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005136-T2
Unique NameKJC3_005136-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1678346..1681437-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005136-T2 ID=KJC3_005136-T2|Name=KJC3_005136-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3092bp|location=Sequence derived from alignment at ch4:1678346..1681437- (Aspergillus niger KJC3)
TGCCAGATGTAGTCAGTGGGCATCTTTTCCAGCTGGGTCATCACGAGTTA
CTCGGATAGCTAATCTAAACAAAGGGGTTAGAAAAACCCCCGGGATGTCT
CTCGGTCTGCGTGAGGGGGAGAGGGGAAAAGACAACGTTCTCGAAAGGTT
CTCGTGCTGCTCTGCGGTTGCTGGAAACCGAATACGCCGTATGAGGCCGT
GCATTACCAGCAAGGTGAAATTACCTGACGGGTGGCTACGAGTCCCACCG
GAACCGCATTCGCATTGAACCGTTCCTTCCACAACGAGAGAGCGAGAAAG
TGAAGAGCGCCGACTTTCTAGGCAAGTACTAGAGCTATATAGTATGTGAC
TTCTCCTTTTCCTCCTCCCAATTCGGGTGACTTCCTTCCTCATTGTACTC
GTGGCACAATCCCGGGCTCGTTCTATCGTTACTTCTGCTCTCTTCCCGGT
CGTCTTCGTCTTCTTCCTCTTCTACTCTCTTTACTCATTCTCCTGCCCAG
TACTCCTCATCCTCATCCTTTTTTCTATCCATCTCTCCCTCGGCGGTGAT
ACGGCGATAAGAATACTACTTCACTTACCTCCCGAACTACCCGCGGTCCC
TCATTTATCGGCGCAACTTGTGATTGGACTCCACTTGCATAGCCCTCGGG
TTTCCCATTACTTAATTCTCTCGCCGTCTTTATATAGAAACCGGTATCTT
TATTCTTCACTACGGTAAAATAAAGGCCAGGACTGAAATTCGGTATGCCC
CAACTTTCCTGTGCCACTCAGGCACAGCCAACATTAGAGCCAGTGAATGT
TGCGCCTAAATGTATTCTTAAACTAACGGTTTCCCTCTTCAGTGTTGTCT
TGCACATCTCCAGACCAATCTCCTAGTGTCTTGTTATACAGACATCTACT
TCCTAAATTCCAGATCTTGCACTGAACCCTGTCCGCCACAATGGTGCGGT
ACACTTCTTCCATTCTCTTGGCCTCGTTGGCCGCCACTTCCGTCTGGGCT
ACCTCGTCCCCTCCTTCATGCAGTACCAGCTCTCAGTGCCCCGAAGAGTA
TCCTTGCTGCTCTCGTGCGTTGGTCCCTTTTCTAATATAGCCCTATGTGG
TATTACCCTCATCCGCTAATGCTTGTTTAGAATATGGACAGTGCGGTACT
GGTGCTTACTGCTTGGGTGGTTGCGACCCCATCTCGTCATACTCTCTAGA
CTCTTGCGTTGGTGAGCCCGTGTGTGAGAGCAAGACCTACAAGTGGGACT
CTCTCGATAGTGCCGCGCTGAACACCAAATACCTCGGAAATGCGTCCGAA
TACGACTGGGTCTACAGCGGCTACCCCAAGTTGGACGATGGTAATCTTCT
CCTCACGATGCCCAAGAACACCGTCGGTACGCTCTTTGCGAACAACCACT
ACGTCTGGTACGGCAAGATTTCCGGCAAAGTCAAGAGCAGCCGTGGTGCC
GGTGTCGTCACGGCTTTTATCCTGCTTTCGGACGTCAAGGACGAGATCGA
CTTTGAGTGGATTGGTGCGGATCTGGTCAATGTCCAGACCAACTATTACT
GGCAGGGTGTTCTGAACTGTAAGCCTAACATCGTCCCGAAGGCAATGCCC
CAAACACGCTGCTAACATGCCTTGTGCAGACAACAACGGCGATAAGGATG
CAGTCAATGGAAGTGATACATTCGATGATTGGCATGAGTATGAGATCGAC
TGGAAGGAAGATGCGATTACCTGGTCGGTGGATGGTGAGGTGAAGCGGAC
TCTCACCAAGGAATCGACCTGGAACGAAACTGCGAAGCGCTACCAATACC
CCCAGTCCCCATCCAGAATGCAGCTTTCCCTGTGGCCCGCCGGCCAAGCC
AGCAACGCACCAGGAACCATTGAGTGGGCGGGTGGCGAAATCGATTGGGA
CAGCCAGGACATTAAAGACAAGGGTTACTACTATGCCACGTTTGGCGAGA
TCACTGTTCAGTGCTACGATGCCCCGAATGGCACTGTTTCGAACGGAAAC
AAGTCGTACATGTTCACCAACAAGGATGGGCTACAGCAATCGGTTCAGAT
CACCAACAATGACACCGTTCTTGCATCTTTTGGCGCCACCGGTCTCGACA
TGGATCTTGGTGCCAGCGACTCCAGCAGCAGTAACGGAACTAACGGCACG
GTTCCGGAGAACCAGGGAGGATCAGGAAACGTACCCGGCAGCAGCACCTC
GAGTGGCAGCTCCAGTACCTCTTCTGGATTCAGCCAGGGCAGCAGCACCG
ACACGAGTGGTGCTCCCTCCCAGAATGAGCGAGTCATGAGAGGCTCATTC
TTTGCTGCCTTGGTCGCAGTTGTCGTTCTGGTCGCTCTCTAAGGAGACTC
GACAAGCAATCACCTTCTTCACTTCTTGGATATTCTTATTCACATAGCTC
GATTCTCGGTGCATGCCCTTCCTTTACGACTTGTGGTTATCATTCTTAAT
CTTTTTTTTTACTGTTCTATACCTGGCGCTCCGAACGCCCGTCTTTGATC
GGATCTTGTACCTTTATGTTTTTGCCCCCATTGGATGTCTTTATGGTTAT
TATGACTGCGCCTGGGTGGTCGCGTTTTTACTGTCATGGACATGACTTGA
ATACACATACTAATACCCCTTTTCCGCCGGGTAAACAGGTGCCCGGTAGC
TGAATGTGTTTATTTTCTCTTTCACTGGTCTGGTGTTTGCATGGTAGATT
ATTGAATGCCAATGGGTCCATTTGGTCAGACAGACAAGCATACCGAAATA
AGATTAATGTACATCACTTCTATTTCACCGGACGATACCGAAGAACAAAT
TACAACATACGAATAGCTACATGCGGGACTCTAACTTCCACAACTTGATA
CACCTACCCTTTTTGCCCTTCGCGACAATCAAAAAGACCAGCAAACTACG
CTCTCCCCCACCCCCAACTCTAGCCCCTCTCCACTAAGCCCTTCCTTATC
CTAGGCAACTCATCACCCACCCACCCAACCAACTAACTAAACGCCAAAAC
GTACATCTACCCCGGAATGATCCACCCCCGATGCATGCAGATACTACGTC
TTCTCGCTGGTATCATTCTACTACGAGAGGCTTACCCAGCTG
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Coding sequence (CDS) from alignment at ch4:1678346..1681437-

>KJC3_005136-T2 ID=KJC3_005136-T2|Name=KJC3_005136-T2|organism=Aspergillus niger KJC3|type=CDS|length=3825bp|location=Sequence derived from alignment at ch4:1678346..1681437- (Aspergillus niger KJC3)
ACAACAACGGCGATAAGGATGCAGTCAATGGAAGTGATACATTCGATGAT
TGGCATGAGTATGAGATCGACTGGAAGGAAGATGCGATTACCTGGTCGGT
GGATGGTGAGGTGAAGCGGACTCTCACCAAGGAATCGACCTGGAACGAAA
CTGCGAAGCGCTACCAATACCCCCAGTCCCCATCCAGAATGCAGCTTTCC
CTGTGGCCCGCCGGCCAAGCCAGCAACGCACCAGGAACCATTGAGTGGGC
GGGTGGCGAAATCGATTGGGACAGCCAGGACATTAAAGACAAGGGTTACT
ACTATGCCACGTTTGGCGAGATCACTGTTCAGTGCTACGATGCCCCGAAT
GGCACTGTTTCGAACGGAAACAAGTCGTACATGTTCACCAACAAGGATGG
GCTACAGCAATCGGTTCAGATCACCAACAATGACACCGTTCTTGCATCTT
TTGGCGCCACCGGTCTCGACATGGATCTTGGTGCCAGCGACTCCAGCAGC
AGTAACGGAACTAACGGCACGGTTCCGGAGAACCAGGGAGGATCAGGAAA
CGTACCCGGCAGCAGCACCTCGAGTGGCAGCTCCAGTACCTCTTCTGGAT
TCAGCCAGGGCAGCAGCACCGACACGAGTGGTGCTCCCTCCCAGAATGAG
CGAGTCATGAGAGGCTCATTCTTTGCTGCCTTGGTCGCAGTTGTCGTTCT
GGTCGCTCTCTAAAATATGGACAGTGCGGTACTGGTGCTTACTGCTTGGG
TGGTTGCGACCCCATCTCGTCATACTCTCTAGACTCTTGCGTTGGTGAGC
CCGTGTGTGAGAGCAAGACCTACAAGTGGGACTCTCTCGATAGTGCCGCG
CTGAACACCAAATACCTCGGAAATGCGTCCGAATACGACTGGGTCTACAG
CGGCTACCCCAAGTTGGACGATGGTAATCTTCTCCTCACGATGCCCAAGA
ACACCGTCGGTACGCTCTTTGCGAACAACCACTACGTCTGGTACGGCAAG
ATTTCCGGCAAAGTCAAGAGCAGCCGTGGTGCCGGTGTCGTCACGGCTTT
TATCCTGCTTTCGGACGTCAAGGACGAGATCGACTTTGAGTGGATTGGTG
CGGATCTGGTCAATGTCCAGACCAACTATTACTGGCAGGGTGTTCTGAAC
TATGGTGCGGTACACTTCTTCCATTCTCTTGGCCTCGTTGGCCGCCACTT
CCGTCTGGGCTACCTCGTCCCCTCCTTCATGCAGTACCAGCTCTCAGTGC
CCCGAAGAGTATCCTTGCTGCTCTCACAACAACGGCGATAAGGATGCAGT
CAATGGAAGTGATACATTCGATGATTGGCATGAGTATGAGATCGACTGGA
AGGAAGATGCGATTACCTGGTCGGTGGATGGTGAGGTGAAGCGGACTCTC
ACCAAGGAATCGACCTGGAACGAAACTGCGAAGCGCTACCAATACCCCCA
GTCCCCATCCAGAATGCAGCTTTCCCTGTGGCCCGCCGGCCAAGCCAGCA
ACGCACCAGGAACCATTGAGTGGGCGGGTGGCGAAATCGATTGGGACAGC
CAGGACATTAAAGACAAGGGTTACTACTATGCCACGTTTGGCGAGATCAC
TGTTCAGTGCTACGATGCCCCGAATGGCACTGTTTCGAACGGAAACAAGT
CGTACATGTTCACCAACAAGGATGGGCTACAGCAATCGGTTCAGATCACC
AACAATGACACCGTTCTTGCATCTTTTGGCGCCACCGGTCTCGACATGGA
TCTTGGTGCCAGCGACTCCAGCAGCAGTAACGGAACTAACGGCACGGTTC
CGGAGAACCAGGGAGGATCAGGAAACGTACCCGGCAGCAGCACCTCGAGT
GGCAGCTCCAGTACCTCTTCTGGATTCAGCCAGGGCAGCAGCACCGACAC
GAGTGGTGCTCCCTCCCAGAATGAGCGAGTCATGAGAGGCTCATTCTTTG
CTGCCTTGGTCGCAGTTGTCGTTCTGGTCGCTCTCTAAAATATGGACAGT
GCGGTACTGGTGCTTACTGCTTGGGTGGTTGCGACCCCATCTCGTCATAC
TCTCTAGACTCTTGCGTTGGTGAGCCCGTGTGTGAGAGCAAGACCTACAA
GTGGGACTCTCTCGATAGTGCCGCGCTGAACACCAAATACCTCGGAAATG
CGTCCGAATACGACTGGGTCTACAGCGGCTACCCCAAGTTGGACGATGGT
AATCTTCTCCTCACGATGCCCAAGAACACCGTCGGTACGCTCTTTGCGAA
CAACCACTACGTCTGGTACGGCAAGATTTCCGGCAAAGTCAAGAGCAGCC
GTGGTGCCGGTGTCGTCACGGCTTTTATCCTGCTTTCGGACGTCAAGGAC
GAGATCGACTTTGAGTGGATTGGTGCGGATCTGGTCAATGTCCAGACCAA
CTATTACTGGCAGGGTGTTCTGAACTATGGTGCGGTACACTTCTTCCATT
CTCTTGGCCTCGTTGGCCGCCACTTCCGTCTGGGCTACCTCGTCCCCTCC
TTCATGCAGTACCAGCTCTCAGTGCCCCGAAGAGTATCCTTGCTGCTCTC
ACAACAACGGCGATAAGGATGCAGTCAATGGAAGTGATACATTCGATGAT
TGGCATGAGTATGAGATCGACTGGAAGGAAGATGCGATTACCTGGTCGGT
GGATGGTGAGGTGAAGCGGACTCTCACCAAGGAATCGACCTGGAACGAAA
CTGCGAAGCGCTACCAATACCCCCAGTCCCCATCCAGAATGCAGCTTTCC
CTGTGGCCCGCCGGCCAAGCCAGCAACGCACCAGGAACCATTGAGTGGGC
GGGTGGCGAAATCGATTGGGACAGCCAGGACATTAAAGACAAGGGTTACT
ACTATGCCACGTTTGGCGAGATCACTGTTCAGTGCTACGATGCCCCGAAT
GGCACTGTTTCGAACGGAAACAAGTCGTACATGTTCACCAACAAGGATGG
GCTACAGCAATCGGTTCAGATCACCAACAATGACACCGTTCTTGCATCTT
TTGGCGCCACCGGTCTCGACATGGATCTTGGTGCCAGCGACTCCAGCAGC
AGTAACGGAACTAACGGCACGGTTCCGGAGAACCAGGGAGGATCAGGAAA
CGTACCCGGCAGCAGCACCTCGAGTGGCAGCTCCAGTACCTCTTCTGGAT
TCAGCCAGGGCAGCAGCACCGACACGAGTGGTGCTCCCTCCCAGAATGAG
CGAGTCATGAGAGGCTCATTCTTTGCTGCCTTGGTCGCAGTTGTCGTTCT
GGTCGCTCTCTAAAATATGGACAGTGCGGTACTGGTGCTTACTGCTTGGG
TGGTTGCGACCCCATCTCGTCATACTCTCTAGACTCTTGCGTTGGTGAGC
CCGTGTGTGAGAGCAAGACCTACAAGTGGGACTCTCTCGATAGTGCCGCG
CTGAACACCAAATACCTCGGAAATGCGTCCGAATACGACTGGGTCTACAG
CGGCTACCCCAAGTTGGACGATGGTAATCTTCTCCTCACGATGCCCAAGA
ACACCGTCGGTACGCTCTTTGCGAACAACCACTACGTCTGGTACGGCAAG
ATTTCCGGCAAAGTCAAGAGCAGCCGTGGTGCCGGTGTCGTCACGGCTTT
TATCCTGCTTTCGGACGTCAAGGACGAGATCGACTTTGAGTGGATTGGTG
CGGATCTGGTCAATGTCCAGACCAACTATTACTGGCAGGGTGTTCTGAAC
TATGGTGCGGTACACTTCTTCCATTCTCTTGGCCTCGTTGGCCGCCACTT
CCGTCTGGGCTACCTCGTCCCCTCCTTCATGCAGTACCAGCTCTCAGTGC
CCCGAAGAGTATCCTTGCTGCTCTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005618cell wall
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798hydrolase activity, acting on glycosyl bonds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0071555cell wall organization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRF2_1KJC3_005136Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005136-T2KJC3_005136-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005136-T2.cdsKJC3_005136-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005136-T2.utr3p1KJC3_005136-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005136-T2.exon5KJC3_005136-T2.exon5Aspergillus niger KJC3exon
KJC3_005136-T2.exon4KJC3_005136-T2.exon4Aspergillus niger KJC3exon
KJC3_005136-T2.exon3KJC3_005136-T2.exon3Aspergillus niger KJC3exon
KJC3_005136-T2.exon2KJC3_005136-T2.exon2Aspergillus niger KJC3exon
KJC3_005136-T2.exon1KJC3_005136-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005136-T2.utr5p3KJC3_005136-T2.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_005136-T2.utr5p2KJC3_005136-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_005136-T2.utr5p1KJC3_005136-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteCAZy:GH16
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR000757
DBxrefInterPro:IPR017168
DBxrefPFAM:PF00722
Product variant 2
ProductPutative glycosidase crf2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1678346..1681437 -
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