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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1685665..1687537+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005137-T1 ID=KJC3_005137-T1|Name=KJC3_005137-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1873bp|location=Sequence derived from alignment at ch4:1685665..1687537+ (Aspergillus niger KJC3)
ATACAAACCCCGAGCACGATTTGCCTGGTTTGCTCCCTCCTTCACTCCGT
CCCCAGCTCGGAGTGAATGAAGCGGGTCCTTTGCCTCTCTTCTGTCTTCT
CTTCTGTCTCCTTTCTTTTCATTCTCTTCATCTTATCCTCAGGATCCCGA
CAGGACTCATCATATCATCTTCTTTCTTTTGTTTACTTCCTCCCACGGCT
ACGCATCTTATCATCTCGAGTACTAAGCAGGAACTTGCCGCCAACGTCAA
CTCTCGCCCATCTCCAAAGATGAGGCCCTATTCTATCGACGGTGCCATGG
CTGAGGCCCTCGGCCACCTTAACCTTATTTCTTGCCATGTAGGTCATCGC
AATCATCTCTCCCCCCTACAAAGCGAGCTAAACCGCGTAGTTCCGTGAGC
ATGGACAGCACCAGATTGCCAACGACATCGGAAAGCTCAGCATCCTGATC
GTGAATAAGTTCTCTGAGGGAGTCGAGCATATTTCTCCGGAGGATTATGC
TCTGGCCCCCGAGGTAAGCATGAACAAGCCGAATCGAATGACAATCCATG
CGATAAGCACTAACAACCATAGCAGGACACTGCCACTCAGGAACCTGCTA
ACACCCAGCTCTCCTCTCACAACGGTTTCCAGAAGCCAAATGGCTCAACT
TACTTGTGCGATACTGAGAAAGAGAACAATGGCTATGTGGATGGGACCAG
AAAGATGCCCGAAGGACGTCATTTGCATAGTGGAAGCTGGGCCCAGGTCG
CGGGCTCGATCTCTAATGGTCGTAGCCATGCCCCAGACGAGGTGCAGCGT
ATATCACCTATGTCTCTGGCTTTGGGCTCCGTGTCCAAGCCAAGCCAGAG
CAGTGACGATGACACTGAAGGGCACGAGCCAGGTAATGCCGGAGTTACGC
TCCCTGCATCTGTCTCCCCCGACATCCCCGAAGCTAAAGCAGGGGTCATT
CGTGTCTATGGGAAGATTACTCGGGATTTCATCCAGTATATCACTACCCG
CATCCACGAAGGACCCTTGCAGGACATCCGCGTGGAGACTAATGGAAGGA
CCAAGGTGACCTTCCAGCACGCGGCCCAGGCGCTTGCTTTCTTGACCTCT
AATCAGGATATGGAGCGCATGCTGGGCTATGGACGTCTTGGAGAAGGCTA
CCGCGTTGAGCTGGCGGAAATTATCGACTGGAATGAGGACCATCGTCGGA
TGAACCAACCCATCCGGGAGCGTCGCCGCCTTTCTTTTGCGAGAAAGAGA
CTCTTTGCTGAAGGCATGTCTCCCGATAAATGGAAGCAGGACATCCGCGC
CCTGGCTGGACCGGGAAACATTGATTTCCTCTGGGTGTTCAACTCTGGCA
ACGGTAAGTACTTAATCGTTCGGAAATCACGAACAGCTAAGCAATGCTAA
TGACTACAGCGACTGCTGTGTTTACGAGCACCGTCGTTGCTCGCCGTGTG
CTCGAAGTCTTTGAGGATTGGAAGAATGGCCGAAACGTCTACAGTGGCGT
TTCGGTGACTTACTCCTCGGACCCTTGCGAGAAGGAATTGGTGCTGGTTC
GCGAGACCAACCGCCCTGGCATGGCCAGGAACTTTATCAAACGGACCCTG
CGTTGACTCAGGCGTTTTGCCTGCAGATGGCACATGCCAAGCAAAGGATA
CCACATCCATTGCATCATTAGTAGTGTGGAGTGAAAGAGGTAAACGGGCA
CCGTGTGTCATGTAGTCCAGATGAAGCCGGCCATCTGCAAGTTGGAAATG
CGAGAAACCCGCCCCACCTCCATACACTGGAGATACTGGGAGGGTGTGCC
TGAGTCGGTCCGTGCCGGCCACGGACCAGAATACGGGGTTCTGTTCATTT
ATGGAAATGTCACGGATTCTAGG back to topCoding sequence (CDS) from alignment at ch4:1685665..1687537+ >KJC3_005137-T1 ID=KJC3_005137-T1|Name=KJC3_005137-T1|organism=Aspergillus niger KJC3|type=CDS|length=4668bp|location=Sequence derived from alignment at ch4:1685665..1687537+ (Aspergillus niger KJC3)
ATGAGGCCCTATTCTATCGACGGTGCCATGGCTGAGGCCCTCGGCCACCT
TAACCTTATTTCTTGCCATTTCCGTGAGCATGGACAGCACCAGATTGCCA
ACGACATCGGAAAGCTCAGCATCCTGATCGTGAATAAGTTCTCTGAGGGA
GTCGAGCATATTTCTCCGGAGGATTATGCTCTGGCCCCCGAGGACACTGC
CACTCAGGAACCTGCTAACACCCAGCTCTCCTCTCACAACGGTTTCCAGA
AGCCAAATGGCTCAACTTACTTGTGCGATACTGAGAAAGAGAACAATGGC
TATGTGGATGGGACCAGAAAGATGCCCGAAGGACGTCATTTGCATAGTGG
AAGCTGGGCCCAGGTCGCGGGCTCGATCTCTAATGGTCGTAGCCATGCCC
CAGACGAGGTGCAGCGTATATCACCTATGTCTCTGGCTTTGGGCTCCGTG
TCCAAGCCAAGCCAGAGCAGTGACGATGACACTGAAGGGCACGAGCCAGG
TAATGCCGGAGTTACGCTCCCTGCATCTGTCTCCCCCGACATCCCCGAAG
CTAAAGCAGGGGTCATTCGTGTCTATGGGAAGATTACTCGGGATTTCATC
CAGTATATCACTACCCGCATCCACGAAGGACCCTTGCAGGACATCCGCGT
GGAGACTAATGGAAGGACCAAGGTGACCTTCCAGCACGCGGCCCAGGCGC
TTGCTTTCTTGACCTCTAATCAGGATATGGAGCGCATGCTGGGCTATGGA
CGTCTTGGAGAAGGCTACCGCGTTGAGCTGGCGGAAATTATCGACTGGAA
TGAGGACCATCGTCGGATGAACCAACCCATCCGGGAGCGTCGCCGCCTTT
CTTTTGCGAGAAAGAGACTCTTTGCTGAAGGCATGTCTCCCGATAAATGG
AAGCAGGACATCCGCGCCCTGGCTGGACCGGGAAACATTGATTTCCTCTG
GGTGTTCAACTCTGGCAACGCGACTGCTGTGTTTACGAGCACCGTCGTTG
CTCGCCGTGTGCTCGAAGTCTTTGAGGATTGGAAGAATGGCCGAAACGTC
TACAGTGGCGTTTCGGTGACTTACTCCTCGGACCCTTGCGAGAAGGAATT
GGTGCTGGTTCGCGAGACCAACCGCCCTGGCATGGCCAGGAACTTTATCA
AACGGACCCTGCGTTGAATGAGGCCCTATTCTATCGACGGTGCCATGGCT
GAGGCCCTCGGCCACCTTAACCTTATTTCTTGCCATTTCCGTGAGCATGG
ACAGCACCAGATTGCCAACGACATCGGAAAGCTCAGCATCCTGATCGTGA
ATAAGTTCTCTGAGGGAGTCGAGCATATTTCTCCGGAGGATTATGCTCTG
GCCCCCGAGGACACTGCCACTCAGGAACCTGCTAACACCCAGCTCTCCTC
TCACAACGGTTTCCAGAAGCCAAATGGCTCAACTTACTTGTGCGATACTG
AGAAAGAGAACAATGGCTATGTGGATGGGACCAGAAAGATGCCCGAAGGA
CGTCATTTGCATAGTGGAAGCTGGGCCCAGGTCGCGGGCTCGATCTCTAA
TGGTCGTAGCCATGCCCCAGACGAGGTGCAGCGTATATCACCTATGTCTC
TGGCTTTGGGCTCCGTGTCCAAGCCAAGCCAGAGCAGTGACGATGACACT
GAAGGGCACGAGCCAGGTAATGCCGGAGTTACGCTCCCTGCATCTGTCTC
CCCCGACATCCCCGAAGCTAAAGCAGGGGTCATTCGTGTCTATGGGAAGA
TTACTCGGGATTTCATCCAGTATATCACTACCCGCATCCACGAAGGACCC
TTGCAGGACATCCGCGTGGAGACTAATGGAAGGACCAAGGTGACCTTCCA
GCACGCGGCCCAGGCGCTTGCTTTCTTGACCTCTAATCAGGATATGGAGC
GCATGCTGGGCTATGGACGTCTTGGAGAAGGCTACCGCGTTGAGCTGGCG
GAAATTATCGACTGGAATGAGGACCATCGTCGGATGAACCAACCCATCCG
GGAGCGTCGCCGCCTTTCTTTTGCGAGAAAGAGACTCTTTGCTGAAGGCA
TGTCTCCCGATAAATGGAAGCAGGACATCCGCGCCCTGGCTGGACCGGGA
AACATTGATTTCCTCTGGGTGTTCAACTCTGGCAACGCGACTGCTGTGTT
TACGAGCACCGTCGTTGCTCGCCGTGTGCTCGAAGTCTTTGAGGATTGGA
AGAATGGCCGAAACGTCTACAGTGGCGTTTCGGTGACTTACTCCTCGGAC
CCTTGCGAGAAGGAATTGGTGCTGGTTCGCGAGACCAACCGCCCTGGCAT
GGCCAGGAACTTTATCAAACGGACCCTGCGTTGAATGAGGCCCTATTCTA
TCGACGGTGCCATGGCTGAGGCCCTCGGCCACCTTAACCTTATTTCTTGC
CATTTCCGTGAGCATGGACAGCACCAGATTGCCAACGACATCGGAAAGCT
CAGCATCCTGATCGTGAATAAGTTCTCTGAGGGAGTCGAGCATATTTCTC
CGGAGGATTATGCTCTGGCCCCCGAGGACACTGCCACTCAGGAACCTGCT
AACACCCAGCTCTCCTCTCACAACGGTTTCCAGAAGCCAAATGGCTCAAC
TTACTTGTGCGATACTGAGAAAGAGAACAATGGCTATGTGGATGGGACCA
GAAAGATGCCCGAAGGACGTCATTTGCATAGTGGAAGCTGGGCCCAGGTC
GCGGGCTCGATCTCTAATGGTCGTAGCCATGCCCCAGACGAGGTGCAGCG
TATATCACCTATGTCTCTGGCTTTGGGCTCCGTGTCCAAGCCAAGCCAGA
GCAGTGACGATGACACTGAAGGGCACGAGCCAGGTAATGCCGGAGTTACG
CTCCCTGCATCTGTCTCCCCCGACATCCCCGAAGCTAAAGCAGGGGTCAT
TCGTGTCTATGGGAAGATTACTCGGGATTTCATCCAGTATATCACTACCC
GCATCCACGAAGGACCCTTGCAGGACATCCGCGTGGAGACTAATGGAAGG
ACCAAGGTGACCTTCCAGCACGCGGCCCAGGCGCTTGCTTTCTTGACCTC
TAATCAGGATATGGAGCGCATGCTGGGCTATGGACGTCTTGGAGAAGGCT
ACCGCGTTGAGCTGGCGGAAATTATCGACTGGAATGAGGACCATCGTCGG
ATGAACCAACCCATCCGGGAGCGTCGCCGCCTTTCTTTTGCGAGAAAGAG
ACTCTTTGCTGAAGGCATGTCTCCCGATAAATGGAAGCAGGACATCCGCG
CCCTGGCTGGACCGGGAAACATTGATTTCCTCTGGGTGTTCAACTCTGGC
AACGCGACTGCTGTGTTTACGAGCACCGTCGTTGCTCGCCGTGTGCTCGA
AGTCTTTGAGGATTGGAAGAATGGCCGAAACGTCTACAGTGGCGTTTCGG
TGACTTACTCCTCGGACCCTTGCGAGAAGGAATTGGTGCTGGTTCGCGAG
ACCAACCGCCCTGGCATGGCCAGGAACTTTATCAAACGGACCCTGCGTTG
AATGAGGCCCTATTCTATCGACGGTGCCATGGCTGAGGCCCTCGGCCACC
TTAACCTTATTTCTTGCCATTTCCGTGAGCATGGACAGCACCAGATTGCC
AACGACATCGGAAAGCTCAGCATCCTGATCGTGAATAAGTTCTCTGAGGG
AGTCGAGCATATTTCTCCGGAGGATTATGCTCTGGCCCCCGAGGACACTG
CCACTCAGGAACCTGCTAACACCCAGCTCTCCTCTCACAACGGTTTCCAG
AAGCCAAATGGCTCAACTTACTTGTGCGATACTGAGAAAGAGAACAATGG
CTATGTGGATGGGACCAGAAAGATGCCCGAAGGACGTCATTTGCATAGTG
GAAGCTGGGCCCAGGTCGCGGGCTCGATCTCTAATGGTCGTAGCCATGCC
CCAGACGAGGTGCAGCGTATATCACCTATGTCTCTGGCTTTGGGCTCCGT
GTCCAAGCCAAGCCAGAGCAGTGACGATGACACTGAAGGGCACGAGCCAG
GTAATGCCGGAGTTACGCTCCCTGCATCTGTCTCCCCCGACATCCCCGAA
GCTAAAGCAGGGGTCATTCGTGTCTATGGGAAGATTACTCGGGATTTCAT
CCAGTATATCACTACCCGCATCCACGAAGGACCCTTGCAGGACATCCGCG
TGGAGACTAATGGAAGGACCAAGGTGACCTTCCAGCACGCGGCCCAGGCG
CTTGCTTTCTTGACCTCTAATCAGGATATGGAGCGCATGCTGGGCTATGG
ACGTCTTGGAGAAGGCTACCGCGTTGAGCTGGCGGAAATTATCGACTGGA
ATGAGGACCATCGTCGGATGAACCAACCCATCCGGGAGCGTCGCCGCCTT
TCTTTTGCGAGAAAGAGACTCTTTGCTGAAGGCATGTCTCCCGATAAATG
GAAGCAGGACATCCGCGCCCTGGCTGGACCGGGAAACATTGATTTCCTCT
GGGTGTTCAACTCTGGCAACGCGACTGCTGTGTTTACGAGCACCGTCGTT
GCTCGCCGTGTGCTCGAAGTCTTTGAGGATTGGAAGAATGGCCGAAACGT
CTACAGTGGCGTTTCGGTGACTTACTCCTCGGACCCTTGCGAGAAGGAAT
TGGTGCTGGTTCGCGAGACCAACCGCCCTGGCATGGCCAGGAACTTTATC
AAACGGACCCTGCGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005137-T1.utr5p1 | KJC3_005137-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005137-T1.utr3p1 | KJC3_005137-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1685665..1687537 + |
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