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KJC3_005147-T1, KJC3_005147-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005147-T1
Unique NameKJC3_005147-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1714397..1715585-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005147-T1 ID=KJC3_005147-T1|Name=KJC3_005147-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1189bp|location=Sequence derived from alignment at ch4:1714397..1715585- (Aspergillus niger KJC3)
GAATTATCAGGATTTAGGACTTAACGGACTTGCACGGCCACACTGCTATT
GTCATCATCTCGGTCCGGAATTCTACGAACGCGTACCTTCTTCGACCCTC
TTCTCGATAATTCCCCTTCTGGACTTCACCTCTGCGTCACTATTCCCATC
ATGCCTGCGCCATTACTAGAAACCATCCACCTGTCGCATCTGCCTCCGTC
GATGCCCGTGCATGTCGCTCTATATCGGGATGTGCAGAATGCTCCGTATC
TTCGCCAGCAGCTCATGTCCGCCAATGCGGAATTCGAATATGCTTTCATT
GATGCAAGCACGGTACGGTGTCAGTATGTCTCTCGGCGGAGCAACTGCTG
AACAATGCTGCAGGTCCTCTCAAGAACACACCTTCTCTCCGCAGTTTTCA
GAGCAGTCAATGATTATATGAACGGCCGCCTCAAATCCCGGAATGTGCAC
TCTGAGATGGTCTTTTCGCTAAGCCCTGCGACAAATGTATGTTTACGATC
AGCTACCAATCGACTTCATGAGCAATGCTGACCACGTCTAGATTGCTGAA
TCTTTCCGCAAGTTCGGCATTACTGATTCCACGAAAGACTTGCTAGTAGT
CAAGCTTTCCGTGAACCCGGAGATCACCCACGACTCGGTAGCAGCCCATC
TCGAACAAAATGTAGAGGGAACGCCTGTGCCATTCGACGACGAAACTTTG
TCGAAGATCTCCGACGTTGCAAAGATCAAGAAGGCTTACAAGCTGGGAGC
GTTGAACACTGCGCCGCCGAACCAAGCAAACGGAACGCATGATGACGGAT
TGCGACGGCTCGAACTGTCGGTCTTGGGAGCGATTGCGCTGCGGGGAGCG
ACTTGAACATGACGTTGAATATAGGAAGTCTTCTCTATTACCCCGATCTC
GCTCGTTTGGGTACTCAGGGCCCTGTAAAGCGGGCGCGCCACATGCAGAA
TGTCTGCGTTACCCGACAGTCGATACCCTAGGCCTGATGCCGGGTCGAAG
CTTTTGCATGTAAAGAGCTACTTCTGCAGATTGATGTCTGCTAGAAGTAG
CTATGCAGGACACGTCTACTATTAGAAATCATGATCTGATGTACATAGAA
TTCAGGGCCGCCGATAGCGTCGGTGCAGAGCACCGATTACGGCTTTGTCC
AGCCAAAAATAAGACTCTAGAAGATAATATATGGCCTCC
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Coding sequence (CDS) from alignment at ch4:1714397..1715585-

>KJC3_005147-T1 ID=KJC3_005147-T1|Name=KJC3_005147-T1|organism=Aspergillus niger KJC3|type=CDS|length=1800bp|location=Sequence derived from alignment at ch4:1714397..1715585- (Aspergillus niger KJC3)
ATTGCTGAATCTTTCCGCAAGTTCGGCATTACTGATTCCACGAAAGACTT
GCTAGTAGTCAAGCTTTCCGTGAACCCGGAGATCACCCACGACTCGGTAG
CAGCCCATCTCGAACAAAATGTAGAGGGAACGCCTGTGCCATTCGACGAC
GAAACTTTGTCGAAGATCTCCGACGTTGCAAAGATCAAGAAGGCTTACAA
GCTGGGAGCGTTGAACACTGCGCCGCCGAACCAAGCAAACGGAACGCATG
ATGACGGATTGCGACGGCTCGAACTGTCGGTCTTGGGAGCGATTGCGCTG
CGGGGAGCGACTTGAGTCCTCTCAAGAACACACCTTCTCTCCGCAGTTTT
CAGAGCAGTCAATGATTATATGAACGGCCGCCTCAAATCCCGGAATGTGC
ACTCTGAGATGGTCTTTTCGCTAAGCCCTGCGACAAATATGCCTGCGCCA
TTACTAGAAACCATCCACCTGTCGCATCTGCCTCCGTCGATGCCCGTGCA
TGTCGCTCTATATCGGGATGTGCAGAATGCTCCGTATCTTCGCCAGCAGC
TCATGTCCGCCAATGCGGAATTCGAATATGCTTTCATTGATGCAAGCACG
ATTGCTGAATCTTTCCGCAAGTTCGGCATTACTGATTCCACGAAAGACTT
GCTAGTAGTCAAGCTTTCCGTGAACCCGGAGATCACCCACGACTCGGTAG
CAGCCCATCTCGAACAAAATGTAGAGGGAACGCCTGTGCCATTCGACGAC
GAAACTTTGTCGAAGATCTCCGACGTTGCAAAGATCAAGAAGGCTTACAA
GCTGGGAGCGTTGAACACTGCGCCGCCGAACCAAGCAAACGGAACGCATG
ATGACGGATTGCGACGGCTCGAACTGTCGGTCTTGGGAGCGATTGCGCTG
CGGGGAGCGACTTGAGTCCTCTCAAGAACACACCTTCTCTCCGCAGTTTT
CAGAGCAGTCAATGATTATATGAACGGCCGCCTCAAATCCCGGAATGTGC
ACTCTGAGATGGTCTTTTCGCTAAGCCCTGCGACAAATATGCCTGCGCCA
TTACTAGAAACCATCCACCTGTCGCATCTGCCTCCGTCGATGCCCGTGCA
TGTCGCTCTATATCGGGATGTGCAGAATGCTCCGTATCTTCGCCAGCAGC
TCATGTCCGCCAATGCGGAATTCGAATATGCTTTCATTGATGCAAGCACG
ATTGCTGAATCTTTCCGCAAGTTCGGCATTACTGATTCCACGAAAGACTT
GCTAGTAGTCAAGCTTTCCGTGAACCCGGAGATCACCCACGACTCGGTAG
CAGCCCATCTCGAACAAAATGTAGAGGGAACGCCTGTGCCATTCGACGAC
GAAACTTTGTCGAAGATCTCCGACGTTGCAAAGATCAAGAAGGCTTACAA
GCTGGGAGCGTTGAACACTGCGCCGCCGAACCAAGCAAACGGAACGCATG
ATGACGGATTGCGACGGCTCGAACTGTCGGTCTTGGGAGCGATTGCGCTG
CGGGGAGCGACTTGAGTCCTCTCAAGAACACACCTTCTCTCCGCAGTTTT
CAGAGCAGTCAATGATTATATGAACGGCCGCCTCAAATCCCGGAATGTGC
ACTCTGAGATGGTCTTTTCGCTAAGCCCTGCGACAAATATGCCTGCGCCA
TTACTAGAAACCATCCACCTGTCGCATCTGCCTCCGTCGATGCCCGTGCA
TGTCGCTCTATATCGGGATGTGCAGAATGCTCCGTATCTTCGCCAGCAGC
TCATGTCCGCCAATGCGGAATTCGAATATGCTTTCATTGATGCAAGCACG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005147KJC3_005147Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005147-T1KJC3_005147-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005147-T1.cdsKJC3_005147-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005147-T1.utr3p1KJC3_005147-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005147-T1.exon3KJC3_005147-T1.exon3Aspergillus niger KJC3exon
KJC3_005147-T1.exon2KJC3_005147-T1.exon2Aspergillus niger KJC3exon
KJC3_005147-T1.exon1KJC3_005147-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005147-T1.utr5p1KJC3_005147-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036504
DBxrefInterPro:IPR013926
DBxrefPFAM:PF08617
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1714397..1715585 -
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