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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1715594..1717399+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005148-T1 ID=KJC3_005148-T1|Name=KJC3_005148-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1806bp|location=Sequence derived from alignment at ch4:1715594..1717399+ (Aspergillus niger KJC3)
CGCCAACTTATCACCGAGGCCGTGATGCTGACTCACGGGCGGCTCATCTC
ACACGTGACTTCACTTCTCGAACGTTCGGGCGACCGTAGCAGCTGGCCGA
CGGCTGACTGATATCATTCTTATAGCCGGCCATCCGCCGCTCTCCATCGC
TTCTCCTCATCTCCATCAACCTCGACATCATCGTCACAATCATGGCGTTC
TTCTTGCGACGCCCGTTCGCCGTCCCTACGGCGCTTCGGCAAATCTCCAA
ACCTGCGAATAGCGCTCGTTTCATCCACAATACGCCCTTCAAGCCCCAGT
CCAAGCCTACCGGTCCCATCTCCATCTTCGCAAAGTCCCGTCAGACCTTC
CAAAATGCTTTCCGTCGCACCTACATGCAGCCCTCCTACAATGTTCAGGG
TGGCAACATCACCCAGAAGCTGATCTACGGTGCCACTATCATCGGTGGTA
CTATCCTGGCAACGAACTTCATCTTCAACCGCGAAACCAGAGAGGATGGT
GGCATGCCTCCGTTTGAGCGCAGCTACCTGAACGAGACGTTTATGCACAC
TGGACTTGGTATTGGTATCATTGGTATCGCTGCTCGCGCTCTGCACACCA
ACGGATGGTCTTACCGTTTGATGGCTGCCAGCCCCTGGGCTGTCATCGGT
CTTGGTCTGGTTGCCAGCGTCGGAACCATGTATGGTACTCTGTACACCAA
CCCTGACAAGTAAGTACTTTCACCAGCGCAGGTCTTTTTTTTCCTATGCG
ACAGTTTTCTGACAAGTTATTAGCTACGTCATGAAGTATGGTCTCTGGGC
AGCTTTCAACGTCACCCAGGCCGCGCTCCTGTCTCCCCTGATGTTCATGC
ACCCGGCTATCCTTGCTCGTGCTGGTCTTTACACCGCTGGAATGATGGGT
GCGATCGCTTTCGTCGGTGCCACTGCTAAGCAGGAGAAGTACATGTACCT
GGGTGCTCCTTTGCTCGCTGGTGTGACCATTGTCGCTCTCTCCGGTTTCG
CTCCTCTCGTCCTCCCCGCTACTGCCACCCGCGCTCTGCTGTGGTCTGAG
AAGATCTGGCTGTACGGTGGTCTCGCTGTCTTCGGTGGTTTCACCCTCTA
TGACGTCCAGAAGATTCTCCACCACGCCCGCATGGCTCAGAGAGGCCTGG
TCCGCAAGGATGTCGTCAACGAGAGTATCAGCCTTGAGTTGGACTTCATC
AATATCTTCGTCCGTATGGTCCAGATCCTGGGCATGCGCAACAACAACCG
GAGGTAAACGCATTTCGCATTTGCAACTCTATGATCGCCCTGGTGTAAAG
CCAGGGTGCCCAAATGCATGAGCATCTCATTGCACTCAGCACCCGAATAT
ACACGGTCTCGAACACTACGATGATTCGGAACTAAGTGGCATTTGTCTTT
TCTGAAAATTCGATTGTATTAGTATTTGCTGCATGGTTTCCACCAAATAA
TTCAGCCTGTATATGGAAGGGCACACACTATCTGTCCGCACCTTTGGCCA
GCGAGGTCATAGGTCAGCCACGCCGTTCCCGGTGACAAGGGACCGTGGCG
ACAGATAGATCTGATGGAATACTCTTTTGTCGATATCTAGAGGTGGAAAC
CCACTAATCTCCACTCTCAATCCATCACCATGAACACATCCAAAAACATC
CGTAGGAAGCATATGCTTCTATCGTAAAGCCACTATAGACCTCCAGCTTC
TCCATCTTGACCATACCTCTCAGGCCTATTAATAGAAATTAATCCCACAT
ACGGAGTAAATATCCCAATTACATCATACCTCTCATATCCGCAACCCCCA
AACCCC back to topCoding sequence (CDS) from alignment at ch4:1715594..1717399+ >KJC3_005148-T1 ID=KJC3_005148-T1|Name=KJC3_005148-T1|organism=Aspergillus niger KJC3|type=CDS|length=2004bp|location=Sequence derived from alignment at ch4:1715594..1717399+ (Aspergillus niger KJC3)
ATGGCGTTCTTCTTGCGACGCCCGTTCGCCGTCCCTACGGCGCTTCGGCA
AATCTCCAAACCTGCGAATAGCGCTCGTTTCATCCACAATACGCCCTTCA
AGCCCCAGTCCAAGCCTACCGGTCCCATCTCCATCTTCGCAAAGTCCCGT
CAGACCTTCCAAAATGCTTTCCGTCGCACCTACATGCAGCCCTCCTACAA
TGTTCAGGGTGGCAACATCACCCAGAAGCTGATCTACGGTGCCACTATCA
TCGGTGGTACTATCCTGGCAACGAACTTCATCTTCAACCGCGAAACCAGA
GAGGATGGTGGCATGCCTCCGTTTGAGCGCAGCTACCTGAACGAGACGTT
TATGCACACTGGACTTGGTATTGGTATCATTGGTATCGCTGCTCGCGCTC
TGCACACCAACGGATGGTCTTACCGTTTGATGGCTGCCAGCCCCTGGGCT
GTCATCGGTCTTGGTCTGGTTGCCAGCGTCGGAACCATGTATGGTACTCT
GTACACCAACCCTGACAACTACGTCATGAAGTATGGTCTCTGGGCAGCTT
TCAACGTCACCCAGGCCGCGCTCCTGTCTCCCCTGATGTTCATGCACCCG
GCTATCCTTGCTCGTGCTGGTCTTTACACCGCTGGAATGATGGGTGCGAT
CGCTTTCGTCGGTGCCACTGCTAAGCAGGAGAAGTACATGTACCTGGGTG
CTCCTTTGCTCGCTGGTGTGACCATTGTCGCTCTCTCCGGTTTCGCTCCT
CTCGTCCTCCCCGCTACTGCCACCCGCGCTCTGCTGTGGTCTGAGAAGAT
CTGGCTGTACGGTGGTCTCGCTGTCTTCGGTGGTTTCACCCTCTATGACG
TCCAGAAGATTCTCCACCACGCCCGCATGGCTCAGAGAGGCCTGGTCCGC
AAGGATGTCGTCAACGAGAGTATCAGCCTTGAGTTGGACTTCATCAATAT
CTTCGTCCGTATGGTCCAGATCCTGGGCATGCGCAACAACAACCGGAGGT
AAATGGCGTTCTTCTTGCGACGCCCGTTCGCCGTCCCTACGGCGCTTCGG
CAAATCTCCAAACCTGCGAATAGCGCTCGTTTCATCCACAATACGCCCTT
CAAGCCCCAGTCCAAGCCTACCGGTCCCATCTCCATCTTCGCAAAGTCCC
GTCAGACCTTCCAAAATGCTTTCCGTCGCACCTACATGCAGCCCTCCTAC
AATGTTCAGGGTGGCAACATCACCCAGAAGCTGATCTACGGTGCCACTAT
CATCGGTGGTACTATCCTGGCAACGAACTTCATCTTCAACCGCGAAACCA
GAGAGGATGGTGGCATGCCTCCGTTTGAGCGCAGCTACCTGAACGAGACG
TTTATGCACACTGGACTTGGTATTGGTATCATTGGTATCGCTGCTCGCGC
TCTGCACACCAACGGATGGTCTTACCGTTTGATGGCTGCCAGCCCCTGGG
CTGTCATCGGTCTTGGTCTGGTTGCCAGCGTCGGAACCATGTATGGTACT
CTGTACACCAACCCTGACAACTACGTCATGAAGTATGGTCTCTGGGCAGC
TTTCAACGTCACCCAGGCCGCGCTCCTGTCTCCCCTGATGTTCATGCACC
CGGCTATCCTTGCTCGTGCTGGTCTTTACACCGCTGGAATGATGGGTGCG
ATCGCTTTCGTCGGTGCCACTGCTAAGCAGGAGAAGTACATGTACCTGGG
TGCTCCTTTGCTCGCTGGTGTGACCATTGTCGCTCTCTCCGGTTTCGCTC
CTCTCGTCCTCCCCGCTACTGCCACCCGCGCTCTGCTGTGGTCTGAGAAG
ATCTGGCTGTACGGTGGTCTCGCTGTCTTCGGTGGTTTCACCCTCTATGA
CGTCCAGAAGATTCTCCACCACGCCCGCATGGCTCAGAGAGGCCTGGTCC
GCAAGGATGTCGTCAACGAGAGTATCAGCCTTGAGTTGGACTTCATCAAT
ATCTTCGTCCGTATGGTCCAGATCCTGGGCATGCGCAACAACAACCGGAG
GTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005148-T1.utr5p1 | KJC3_005148-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005148-T1.utr3p1 | KJC3_005148-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006214 |
| DBxref | PFAM:PF01027 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1715594..1717399 + |
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