You are here

KJC3_005149-T1, KJC3_005149-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005149-T1
Unique NameKJC3_005149-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1718109..1718975-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005149-T1 ID=KJC3_005149-T1|Name=KJC3_005149-T1|organism=Aspergillus niger KJC3|type=mRNA|length=867bp|location=Sequence derived from alignment at ch4:1718109..1718975- (Aspergillus niger KJC3)
ATGAGCGGCAAGTCGGTCTCGAATTTACCATGGTGAGCTCAATTCCCGGA AATTTCCCTCTCTATATAAGCATTAATCGATCCTCTAACCTCCTCATCTT CTGATAGCGACGACCCCCAATGCTTCTGCCATTTCCGCTCCCCTAAGCCC TTTCCCAAGATCGAAGCAATTCTGACAGGCTCTGAACCCGACCAAGTCCA CGAATTGCATCAACCAAACGCGCAGCTCGACATAGCATTCGACGTGGTAG GCTGTGTTATGACACTAAATGAATGCATCCATGATCCTTCACGACCAAAG ATCGGCTACTCAGTCAGTCTAATGATCAAAGCGGCAAACACCCACTTTGT GAACCTAGAAGGCCTTGAAGATCATTCCCTCCTTCTAACCATCCGAATCC GTCATTCAGCATGTGCTGTGAGAGGCAACAAGATGATTCTGAGAGAAAAG TTCAACGGATACTTCCCTGACCCTCCGTATAGTCGACTATACAATGATCT GTTCGAGTGCCGTTGGCCTGAAAAGACACTCCAGATTCGTCTGCCCGAGG AGAGATGTCGACGCTGGAAGACTGTCGCTCTGATACTGCGAACCTTCGGG CAGATCAATGGAGATAGCTATTGTCATATAGCTAACATGGTGTTTACTCC CCGTGTGGGTGGGCTCAATGTGCGTCAGATTAAGAAGGACATCAAGATAG AGCTGGCGAAGAATGATCATAAGCGGAGGAAGAATCCTGTGTCTCCTGAG TACATGGTGACGGTTAACGATACCGAGAAGGTTGATATACTCAATCATGC TTATGAAGTTCATCTCCTTGCTTTTATTCACAGCTCGTCTCGGTTTCTTC GGCCACAGTACCTGTAG
back to top

Coding sequence (CDS) from alignment at ch4:1718109..1718975-

>KJC3_005149-T1 ID=KJC3_005149-T1|Name=KJC3_005149-T1|organism=Aspergillus niger KJC3|type=CDS|length=1584bp|location=Sequence derived from alignment at ch4:1718109..1718975- (Aspergillus niger KJC3)
CGACGACCCCCAATGCTTCTGCCATTTCCGCTCCCCTAAGCCCTTTCCCA
AGATCGAAGCAATTCTGACAGGCTCTGAACCCGACCAAGTCCACGAATTG
CATCAACCAAACGCGCAGCTCGACATAGCATTCGACGTGGTAGGCTGTGT
TATGACACTAAATGAATGCATCCATGATCCTTCACGACCAAAGATCGGCT
ACTCAGTCAGTCTAATGATCAAAGCGGCAAACACCCACTTTGTGAACCTA
GAAGGCCTTGAAGATCATTCCCTCCTTCTAACCATCCGAATCCGTCATTC
AGCATGTGCTGTGAGAGGCAACAAGATGATTCTGAGAGAAAAGTTCAACG
GATACTTCCCTGACCCTCCGTATAGTCGACTATACAATGATCTGTTCGAG
TGCCGTTGGCCTGAAAAGACACTCCAGATTCGTCTGCCCGAGGAGAGATG
TCGACGCTGGAAGACTGTCGCTCTGATACTGCGAACCTTCGGGCAGATCA
ATGGAGATAGCTATTGTCATATAGCTAACATGGTGTTTACTCCCCGTGTG
GGTGGGCTCAATGTGCGTCAGATTAAGAAGGACATCAAGATAGAGCTGGC
GAAGAATGATCATAAGCGGAGGAAGAATCCTGTGTCTCCTGAGTACATGG
TGACGGTTAACGATACCGAGAAGGTTGATATACTCAATCATGCTTATGAA
GTTCATCTCCTTGCTTTTATTCACAGCTCGTCTCGGTTTCTTCGGCCACA
GTACCTGTAGATGAGCGGCAAGTCGGTCTCGAATTTACCATGCGACGACC
CCCAATGCTTCTGCCATTTCCGCTCCCCTAAGCCCTTTCCCAAGATCGAA
GCAATTCTGACAGGCTCTGAACCCGACCAAGTCCACGAATTGCATCAACC
AAACGCGCAGCTCGACATAGCATTCGACGTGGTAGGCTGTGTTATGACAC
TAAATGAATGCATCCATGATCCTTCACGACCAAAGATCGGCTACTCAGTC
AGTCTAATGATCAAAGCGGCAAACACCCACTTTGTGAACCTAGAAGGCCT
TGAAGATCATTCCCTCCTTCTAACCATCCGAATCCGTCATTCAGCATGTG
CTGTGAGAGGCAACAAGATGATTCTGAGAGAAAAGTTCAACGGATACTTC
CCTGACCCTCCGTATAGTCGACTATACAATGATCTGTTCGAGTGCCGTTG
GCCTGAAAAGACACTCCAGATTCGTCTGCCCGAGGAGAGATGTCGACGCT
GGAAGACTGTCGCTCTGATACTGCGAACCTTCGGGCAGATCAATGGAGAT
AGCTATTGTCATATAGCTAACATGGTGTTTACTCCCCGTGTGGGTGGGCT
CAATGTGCGTCAGATTAAGAAGGACATCAAGATAGAGCTGGCGAAGAATG
ATCATAAGCGGAGGAAGAATCCTGTGTCTCCTGAGTACATGGTGACGGTT
AACGATACCGAGAAGGTTGATATACTCAATCATGCTTATGAAGTTCATCT
CCTTGCTTTTATTCACAGCTCGTCTCGGTTTCTTCGGCCACAGTACCTGT
AGATGAGCGGCAAGTCGGTCTCGAATTTACCATG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005149KJC3_005149Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005149-T1KJC3_005149-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005149-T1.cdsKJC3_005149-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005149-T1.exon2KJC3_005149-T1.exon2Aspergillus niger KJC3exon
KJC3_005149-T1.exon1KJC3_005149-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1718109..1718975 -