You are here

Home

KJC3_005157-T2, KJC3_005157-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005157-T2
Unique NameKJC3_005157-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1744964..1747029+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005157-T2 ID=KJC3_005157-T2|Name=KJC3_005157-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2066bp|location=Sequence derived from alignment at ch4:1744964..1747029+ (Aspergillus niger KJC3)
ATCCATTCTCCCCTGGCTTTTCGGGCTCAGACTCTTACACGAGCATCTGC
GTCCTTGTCTGCATGATATACAATTCCCAATATTGATTGCTCCTGATGTC
CGAACGGATTTCCCGTCCGTCCAGTCCCTACTTGGAGCCCCCGAGGAAGA
GCGTCGAGTTGGAAGACCCGGGGGCTCAGGATTCCGGTAAGCAGCACAGT
CTAGCACTGGGAATCCAATGGTTCGGAATTAACACCTCATCTACAGCTAC
GAACAGTGACGACGAACATTTTTCAGACGCCAGCGAGGGCCACCAACGCC
CTGAATCCCACCCGCCGTCCGGCCGAGCTTCCCCTATCCCCTTAACCCGT
GTGGAGAAGGTCGACGAGGAACCCTCGCATGGGGAGGTGCCTGGGACTGC
TGCGTACGAAATAAGGGACCAGGATGCCGTTCCCGACCAGATTGAAGTTA
TCCCGGAGGGTTCACGCAGCCGAAGCGCTTCAGCGAGCGGCGAACGGCCT
GTGACTCCGACATCAATTCCGCGGACAGTGGTTGAGAAAGTCGACTTAGA
TCAACCCAGTCATGGCGATATTCCCGGCACCCCAGCGTATGAAAAAAGAA
AGGCAGATGCGGTACCCGATGTGGTGAAGAAGGCGTCGGATTCAGATTCA
GATGAACCGTCCCCTATACCGGGGTCCTTCGAGGCCAGTGCGGCCGAGAC
ACCTGTTCCCGAAACGCTGCTCTCCCGCGTGGAATCCAACGAGGACGATG
TCACAGAAGAAGGTCCTGTTGCTCATCAGCCAAAGCCGATTGATCCGGAG
CCAGACCACACCGAGACCGTCCCCGATGCACCAGGTAAGCCGGATTTCGG
TTGAATTACGACATAAGTTTCAGGGACGATTGACCAATTCAGATTCGCCT
GCAAGCCATCGAAGTCACACCCGCCGAGGATCGTCAGTAAACGACGCCGC
AGCCGTCGACCCGGCCGGTGCAGACGAGTTTGACGATTTCGCCGAGGAGC
AGGAAGACGACGACTTTGGAGACTTTGACGACTTCGACGATGGCTTCCAA
GAGCCTATGGAGGCTGTCGAGGATGAACCAGCAGAAATACAGCCCTCGCA
GCCTCCCACACCTCCTTCAGTTGTATGTACACCCTCAAATATCAGTATAC
AGCGTAAGAAATGCTAAACCGTTTCCAGCCACCCCTCCTCGACCTTGACG
CCATTCCCTCCCTTGCAGACCTTCACACCACCCTCTCCGACCCCCTCGAC
CGCCTCTTCCCCAGCACCAAAGACACCGTCAGCCTGCAGCCCCTTGACCC
GATCCCCAACCCCACCGCCATCTTCAGCACCGAGCGCTCCCTCTCCCTTT
GGTCTCAGCTCGTAGCCCCTCCCCCACTCCAGCCCCAAAACTGGGTGAAA
TCCCGCATCCGGCGACTCTTCCTCGTCTCACTTGGCGTGCCCGTCGACCT
CGACGAGATTCTCCCAGCCTCTAAGCAAAAGAAACTCATCCTCCCCTCTG
TCAACCTCGACGACACACGTCGCTCCTCCACCCCACCAATCGCACACTCT
CGCTCCCAAAGCCTAGCAGCCAAGCGCGACAGCACACAAAGCGGCCCCGG
CAGCCCAGGCCCCAACCAACAATCTCGAACCCGAACTTCTCGCCGAAGAG
AACCCTCCCCACCACCTGAATTGGATCTCCCGGCCGTACACCGCCTGTGC
GCAACCACAGACGCAGCTCTAGACGGCCTAACGGACAAAGAACTCCGCGG
ACATGTCCAGGAACTCGAGTCAGCAACTTTACGCGCAAGCTCCGTACTAG
AGTACTGGTTGAAACGATTGGACGGGCTCATCAGTGAAAAGGAGGCGTTT
GAAGGCGTCATAGAAAATTTGGTAAGCCATGCTAGACGAGTCCGGAAGTG
AGTGGGTGTTCTTCTTATATTATCCATTCCTCTCATTTCTATGCTGGCTG
GCATGATCTCGACTGTTATTGTGATGATTGTGCGATGTGATGTGATGTCT
TGTGATGAGATGTTGATAGATCGATTATAAATATGACTATTAATTTAATG
ATTATACATATGCTAC
back to top

Coding sequence (CDS) from alignment at ch4:1744964..1747029+

>KJC3_005157-T2 ID=KJC3_005157-T2|Name=KJC3_005157-T2|organism=Aspergillus niger KJC3|type=CDS|length=2388bp|location=Sequence derived from alignment at ch4:1744964..1747029+ (Aspergillus niger KJC3)
ATGAACCGTCCCCTATACCGGGGTCCTTCGAGGCCAGTGCGGCCGAGACA
CCTGTTCCCGAAACGCTGCTCTCCCGCGTGGAATCCAACGAGGACGATGT
CACAGAAGAAGGTCCTGTTGCTCATCAGCCAAAGCCGATTGATCCGGAGC
CAGACCACACCGAGACCGTCCCCGATGCACCAGGTAAGCCGGATTTCGGT
TGAATTACGACATAAGTTTCAGGGACGATTGACCAATTCAGATTCGCCTG
CAAGCCATCGAAGTCACACCCGCCGAGGATCGTCAGTAAACGACGCCGCA
GCCGTCGACCCGGCCGGTGCAGACGAGTTTGACGATTTCGCCGAGGAGCA
GGAAGACGACGACTTTGGAGACTTTGACGACTTCGACGATGGCTTCCAAG
AGCCTATGGAGGCTGTCGAGGATGAACCAGCAGAAATACAGCCCTCGCAG
CCTCCCACACCTCCTTCAGTTCCACCCCTCCTCGACCTTGACGCCATTCC
CTCCCTTGCAGACCTTCACACCACCCTCTCCGACCCCCTCGACCGCCTCT
TCCCCAGCACCAAAGACACCGTCAGCCTGCAGCCCCTTGACCCGATCCCC
AACCCCACCGCCATCTTCAGCACCGAGCGCTCCCTCTCCCTTTGGTCTCA
GCTCGTAGCCCCTCCCCCACTCCAGCCCCAAAACTGGGTGAAATCCCGCA
TCCGGCGACTCTTCCTCGTCTCACTTGGCGTGCCCGTCGACCTCGACGAG
ATTCTCCCAGCCTCTAAGCAAAAGAAACTCATCCTCCCCTCTGTCAACCT
CGACGACACACGTCGCTCCTCCACCCCACCAATCGCACACTCTCGCTCCC
AAAGCCTAGCAGCCAAGCGCGACAGCACACAAAGCGGCCCCGGCAGCCCA
GGCCCCAACCAACAATCTCGAACCCGAACTTCTCGCCGAAGAGAACCCTC
CCCACCACCTGAATTGGATCTCCCGGCCGTACACCGCCTGTGCGCAACCA
CAGACGCAGCTCTAGACGGCCTAACGGACAAAGAACTCCGCGGACATGTC
CAGGAACTCGAGTCAGCAACTTTACGCGCAAGCTCCGTACTAGAGTACTG
GTTGAAACGATTGGACGGGCTCATCAGTGAAAAGGAGGCGTTTGAAGGCG
TCATAGAAAATTTGGTAAGCCATGCTAGACGAGTCCGGAAGTGAATGAAC
CGTCCCCTATACCGGGGTCCTTCGAGGCCAGTGCGGCCGAGACACCTGTT
CCCGAAACGCTGCTCTCCCGCGTGGAATCCAACGAGGACGATGTCACAGA
AGAAGGTCCTGTTGCTCATCAGCCAAAGCCGATTGATCCGGAGCCAGACC
ACACCGAGACCGTCCCCGATGCACCAGGTAAGCCGGATTTCGGTTGAATT
ACGACATAAGTTTCAGGGACGATTGACCAATTCAGATTCGCCTGCAAGCC
ATCGAAGTCACACCCGCCGAGGATCGTCAGTAAACGACGCCGCAGCCGTC
GACCCGGCCGGTGCAGACGAGTTTGACGATTTCGCCGAGGAGCAGGAAGA
CGACGACTTTGGAGACTTTGACGACTTCGACGATGGCTTCCAAGAGCCTA
TGGAGGCTGTCGAGGATGAACCAGCAGAAATACAGCCCTCGCAGCCTCCC
ACACCTCCTTCAGTTCCACCCCTCCTCGACCTTGACGCCATTCCCTCCCT
TGCAGACCTTCACACCACCCTCTCCGACCCCCTCGACCGCCTCTTCCCCA
GCACCAAAGACACCGTCAGCCTGCAGCCCCTTGACCCGATCCCCAACCCC
ACCGCCATCTTCAGCACCGAGCGCTCCCTCTCCCTTTGGTCTCAGCTCGT
AGCCCCTCCCCCACTCCAGCCCCAAAACTGGGTGAAATCCCGCATCCGGC
GACTCTTCCTCGTCTCACTTGGCGTGCCCGTCGACCTCGACGAGATTCTC
CCAGCCTCTAAGCAAAAGAAACTCATCCTCCCCTCTGTCAACCTCGACGA
CACACGTCGCTCCTCCACCCCACCAATCGCACACTCTCGCTCCCAAAGCC
TAGCAGCCAAGCGCGACAGCACACAAAGCGGCCCCGGCAGCCCAGGCCCC
AACCAACAATCTCGAACCCGAACTTCTCGCCGAAGAGAACCCTCCCCACC
ACCTGAATTGGATCTCCCGGCCGTACACCGCCTGTGCGCAACCACAGACG
CAGCTCTAGACGGCCTAACGGACAAAGAACTCCGCGGACATGTCCAGGAA
CTCGAGTCAGCAACTTTACGCGCAAGCTCCGTACTAGAGTACTGGTTGAA
ACGATTGGACGGGCTCATCAGTGAAAAGGAGGCGTTTGAAGGCGTCATAG
AAAATTTGGTAAGCCATGCTAGACGAGTCCGGAAGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005157KJC3_005157Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005157-T2KJC3_005157-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005157-T2.utr5p1KJC3_005157-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_005157-T2.utr5p2KJC3_005157-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005157-T2.exon1KJC3_005157-T2.exon1Aspergillus niger KJC3exon
KJC3_005157-T2.exon2KJC3_005157-T2.exon2Aspergillus niger KJC3exon
KJC3_005157-T2.exon3KJC3_005157-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005157-T2.cdsKJC3_005157-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005157-T2.utr3p1KJC3_005157-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR031355
DBxrefPFAM:PF17104
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1744964..1747029 +
Powered by Drupal