|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1781372..1784991- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005169-T1 ID=KJC3_005169-T1|Name=KJC3_005169-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3620bp|location=Sequence derived from alignment at ch4:1781372..1784991- (Aspergillus niger KJC3)
CTCATCCTCTCCCACTTCCATTCGGTCGGGTTTCTCCAGACCATCAATTA
GCCAGCCTTGCGATACTTGGGCCTTATCCTCCGCTCTCTGCTTTCCTCCA
TGTAGTTTGCCAAGCCGACCCACGACTTTAATCGCGGTCATTTTCCCGGA
TTGACCTGGTGCGGTCCTCCAAGTGCACCGCGCGCTGGATCCGCAACGTG
GAATGTCTTTGCGACTCACCTGTCTTGCCTCGTCGTTGCGCTCCTCGGAT
CTTTTCTGTGCCAACGAGATCTCCTCCTGCGTGTCACGCCTTGCCTGGCC
CCAATTCTTATTAACTATATTCTCTATTTTTGGATCGCCGATGCCCCTGG
AGGAGCATTGCTGCTGACCGGAAAAGAATTGGCATCGGTCTGGGTTGTAA
GACGCGCTGGGGCGGGCATTAATTCGTTAGTTACCGTCTCTCTCCCCTTG
CGCTGGCCATCCACTTCCCTCCCTTGCTGGCCGCCGCTCAGTTGCTTTTA
CAACAAACTTTGTCCAGGGTTGGGAGGAAAGAAAAAAAGGGAAAAGAAAA
AAAAAGATAAGGAAAAAAAGATCCAGTGAATGTGTACAAGGTAGCCGTTG
TCCACAACGGTCACGTCGTGGGATTTTCTTATTCCATTGTAGTAACTCTT
TCTGTTTGAAACTCGACCCTGACACTCTGAATTGCCGCGGTGAGCAGGCG
ATGCGACGACGTCAGCTACCAGTTGGGACCAATCTCCATTGAAACAACTC
AAGTGTCAATGCTTCTCCTGCCAATCACCCACTGCGATCGCTTGTGACAA
ATATCAGTCCGGATTGCCGCGACCGTCGGGTCCGCCAATTGGGCATCCCA
GACAGTTGGGCCATCTCACCATGCCCGGCCTGGAAGTCGTGAACACGTCT
CTCGCCTCACCAGGACACCTGGATCCGCCCCAGTTGAGGGCCCACAAGTC
TCTACGACGAAGGCCAAATGTCCTCTGGAGCCCTCCAGCCATCGAGGCAA
CGCCTCAACCTCAGCATGGCCGCCCTTCAAATGCCACCCCGTTGGCAGCC
GCTCTTGTCCGTCCTATAACGCCGCCTGGAGTTGCTCAGAGCGAAGACCT
CATGAGCAGCGGAACAAGCACGCCAAAAGCTACTTCATCCTACTCCGTGA
ACGGGGCGGTGACCTCCAAGCCGTCCCATCCACCCACGCCTGAAACTACT
CCCCCGCGTGTCGCTCCTTCAGCCCCGCGTCCGGGACTGTCGCACTTTGG
ACTGTCCTCTTCCTCCTCATCGCACGCCGAGTCGTTTCGGACAGCTTATG
AAATGATCTCGGACGCGGAGACGGAAACTCCTCGCCAGTCGACGCAGTCG
TTGTTGCCTACCAGACAGAAATCGTTGAGGAGGGACGAGCCGGCGGACTA
TGATGACCGAGGGAGTGGAGAGTCGACACCGGTTCCTGATCCTCGTACTC
AGCGCCTCCAACCGTCCGCGATGGAGACTCCTGCGCAACGAAAGATGGAT
AATGGTGCGGAATCCAAGGTGTCGCCGCCGCGCAAGAAGAAGTCTACGAG
GAATGGAGTTCCTAGGATCCGTAATGCGGACGCAGAACAGGGCTACGATA
TGAATGGTCGAGAGACACAAAACACCAAAGCTCTTCCAGCACGCTCAAAT
TTACGGGAGTCTGTCAGGGATGCGCAGGAACCAGTTGGTGGCTTATCCAT
TGAGCAGTTTCGCGAAGAGATTGGCTGGCCACGTGCGGAGGACCAGCCTC
ACTCTGCCGAGCACGATGACGCTCGCCGGCTGTCAGACGTTTCTATGTCC
TCGTCCACTGTCGAGGTGATGATCATCGACGCACCAAGGTCCACCCGAAG
ATCCCTGCGCCATACCGATAAGAGGGGCTCGCTGCGTTCGGCTAGTTCGC
CTTTTCCCAGCCCAGAACATGCTTCAACCGCTTCCAGCGCGGACTCGCAA
CATCGCCTGGTACACAAAGCTGGTCGAATCACCGAGAGTGACCGCAAGAG
CATCGCGTCGGAAATCTCGTTCTCTGGGGCCTCCAGTGTGAACACCCAGC
AACAAACCGTGGACGTGGTGCCAGTGGTTGTGATCCCGGAACGACGCTCT
TCCCTTAAGTCGTCCACTTCAACCAGCAGGAATACCTCGCAAAGCCGCTC
GCGCCACTCGAGTCGGCAGGGCCCGTCCGCATCGGGTAGTCGGCCTGGCT
CTCGCGAGCCTCCTCGTCAGAAGCGCACATCCGACACGACTGCGAGCAGC
ACGAGGCGGGCGGAATCTCGTGGTCGCCACTCTGGCCGACCGAGTATCCC
GGCTCGCAGCTCCTCGCTCTCTGCACCAACCAGTCGTAATAATTCCCGGA
CTACATCTCTGACATCGGAGAGTCTCCGGGATCATGCAATGTTTACGGAA
CAGGGGACTCATGATCGCGTTGCTGAGCCGCCACGTCCAGCCAAAGCAGA
GACCGTCGCTCGAGAGCCACACGATGCTGCGGAAGCATCCAAGACGCAGT
CAATTATCATTGGAGTGGAAGACATGTCGCATCTGCGCCCGCCATCGATG
CCGTACACACAAATCTCGATCCCCTCATCTTCTCCTGGCCTGATCGAAGT
CAGCGAGGCGAGGACTGTTGTATTCTTCCCGCACAACAATGAATCATTGC
TCTTGGTCGATCCGCAGGCCCCGTCTGCACAGCGAGGGCAACCCGACTAC
CCTGAACTGTACCAACACAGGATGGAAGAATCGCCCACTCAACGCTACGA
GATGACATCCCCGCTCAAAGACCCCCGCCAGCCACCACAACCGCCCATCT
GCCAGGTCGTGCCACCGACACCCGTGCAAGACGTCGACAGCCAGCCGGGC
GGGGCAGGTTACATCAACGAACCAAGTAAACGCCGGGGCCGTCGGTTTGG
CCCGGGCCGCCGTCCGTGGCTGGTACGTCCTCGGTCTGACTCTTTCAATT
CATTCGTCCGCTCATTGTCACTGACGTCGGTGAAGAACCGCAAGGCCGGC
AAGGACATCGATGGGCGACAGCAGCCCTTTTGGCGACCTCGTCGGTTCTG
GGAGGACTCGGAACCAGAGGAAGAATCGCCTCGCGTGGCTCCGCGTTCGC
CAGCTCCAGACCCCGAGGCGTCGGACCTAGTGATCAAGAACTCGTTGGGC
ATGCCGCAGCAGCGCGTTGTGTTTGAGGGCCCTGCGCTTCGCAGCCCAGG
TGCCAGGCGGCGGCCCGAACAAGCCAGTCGACACCTCGCCAACCGCAGCA
CGCTCGTAGGAAGCCAAGTCTTCAGCCCCGAGGCATTCTGCTCGCAGACA
TCGCTCCACCACCAGCGATTCCGGTCTTTGTCATGGTGGCGGCTGCGCTT
GCGAACGAATAAGATCCGTAACATCCGCAAACGAGTGCGACGCACGTGGC
AGCGACACGCCGAACACCGTCGGGAAGCCAAACGCGAGAAACTCAAGCAG
AGTATCAGCGGGGCAGTCCTGATGGAGTCGAGCACGCAGCTGAGAATACC
AGAATGATGCCATTGGACCCATTGACTAAACATGAATGACCGTGATGTCT
CTCTTTATCGCTAATTAGAATGTGCTATATGCTATGCTATGAATGACGGC
GTCAACGACGATATGATGAT back to topCoding sequence (CDS) from alignment at ch4:1781372..1784991- >KJC3_005169-T1 ID=KJC3_005169-T1|Name=KJC3_005169-T1|organism=Aspergillus niger KJC3|type=CDS|length=5148bp|location=Sequence derived from alignment at ch4:1781372..1784991- (Aspergillus niger KJC3)
AACCGCAAGGCCGGCAAGGACATCGATGGGCGACAGCAGCCCTTTTGGCG
ACCTCGTCGGTTCTGGGAGGACTCGGAACCAGAGGAAGAATCGCCTCGCG
TGGCTCCGCGTTCGCCAGCTCCAGACCCCGAGGCGTCGGACCTAGTGATC
AAGAACTCGTTGGGCATGCCGCAGCAGCGCGTTGTGTTTGAGGGCCCTGC
GCTTCGCAGCCCAGGTGCCAGGCGGCGGCCCGAACAAGCCAGTCGACACC
TCGCCAACCGCAGCACGCTCGTAGGAAGCCAAGTCTTCAGCCCCGAGGCA
TTCTGCTCGCAGACATCGCTCCACCACCAGCGATTCCGGTCTTTGTCATG
GTGGCGGCTGCGCTTGCGAACGAATAAGATCCGTAACATCCGCAAACGAG
TGCGACGCACGTGGCAGCGACACGCCGAACACCGTCGGGAAGCCAAACGC
GAGAAACTCAAGCAGAGTATCAGCGGGGCAGTCCTGATGGAGTCGAGCAC
GCAGCTGAGAATACCAGAATGAATGCCCGGCCTGGAAGTCGTGAACACGT
CTCTCGCCTCACCAGGACACCTGGATCCGCCCCAGTTGAGGGCCCACAAG
TCTCTACGACGAAGGCCAAATGTCCTCTGGAGCCCTCCAGCCATCGAGGC
AACGCCTCAACCTCAGCATGGCCGCCCTTCAAATGCCACCCCGTTGGCAG
CCGCTCTTGTCCGTCCTATAACGCCGCCTGGAGTTGCTCAGAGCGAAGAC
CTCATGAGCAGCGGAACAAGCACGCCAAAAGCTACTTCATCCTACTCCGT
GAACGGGGCGGTGACCTCCAAGCCGTCCCATCCACCCACGCCTGAAACTA
CTCCCCCGCGTGTCGCTCCTTCAGCCCCGCGTCCGGGACTGTCGCACTTT
GGACTGTCCTCTTCCTCCTCATCGCACGCCGAGTCGTTTCGGACAGCTTA
TGAAATGATCTCGGACGCGGAGACGGAAACTCCTCGCCAGTCGACGCAGT
CGTTGTTGCCTACCAGACAGAAATCGTTGAGGAGGGACGAGCCGGCGGAC
TATGATGACCGAGGGAGTGGAGAGTCGACACCGGTTCCTGATCCTCGTAC
TCAGCGCCTCCAACCGTCCGCGATGGAGACTCCTGCGCAACGAAAGATGG
ATAATGGTGCGGAATCCAAGGTGTCGCCGCCGCGCAAGAAGAAGTCTACG
AGGAATGGAGTTCCTAGGATCCGTAATGCGGACGCAGAACAGGGCTACGA
TATGAATGGTCGAGAGACACAAAACACCAAAGCTCTTCCAGCACGCTCAA
ATTTACGGGAGTCTGTCAGGGATGCGCAGGAACCAGTTGGTGGCTTATCC
ATTGAGCAGTTTCGCGAAGAGATTGGCTGGCCACGTGCGGAGGACCAGCC
TCACTCTGCCGAGCACGATGACGCTCGCCGGCTGTCAGACGTTTCTATGT
CCTCGTCCACTGTCGAGGTGATGATCATCGACGCACCAAGGTCCACCCGA
AGATCCCTGCGCCATACCGATAAGAGGGGCTCGCTGCGTTCGGCTAGTTC
GCCTTTTCCCAGCCCAGAACATGCTTCAACCGCTTCCAGCGCGGACTCGC
AACATCGCCTGGTACACAAAGCTGGTCGAATCACCGAGAGTGACCGCAAG
AGCATCGCGTCGGAAATCTCGTTCTCTGGGGCCTCCAGTGTGAACACCCA
GCAACAAACCGTGGACGTGGTGCCAGTGGTTGTGATCCCGGAACGACGCT
CTTCCCTTAAGTCGTCCACTTCAACCAGCAGGAATACCTCGCAAAGCCGC
TCGCGCCACTCGAGTCGGCAGGGCCCGTCCGCATCGGGTAGTCGGCCTGG
CTCTCGCGAGCCTCCTCGTCAGAAGCGCACATCCGACACGACTGCGAGCA
GCACGAGGCGGGCGGAATCTCGTGGTCGCCACTCTGGCCGACCGAGTATC
CCGGCTCGCAGCTCCTCGCTCTCTGCACCAACCAGTCGTAATAATTCCCG
GACTACATCTCTGACATCGGAGAGTCTCCGGGATCATGCAATGTTTACGG
AACAGGGGACTCATGATCGCGTTGCTGAGCCGCCACGTCCAGCCAAAGCA
GAGACCGTCGCTCGAGAGCCACACGATGCTGCGGAAGCATCCAAGACGCA
GTCAATTATCATTGGAGTGGAAGACATGTCGCATCTGCGCCCGCCATCGA
TGCCGTACACACAAATCTCGATCCCCTCATCTTCTCCTGGCCTGATCGAA
GTCAGCGAGGCGAGGACTGTTGTATTCTTCCCGCACAACAATGAATCATT
GCTCTTGGTCGATCCGCAGGCCCCGTCTGCACAGCGAGGGCAACCCGACT
ACCCTGAACTGTACCAACACAGGATGGAAGAATCGCCCACTCAACGCTAC
GAGATGACATCCCCGCTCAAAGACCCCCGCCAGCCACCACAACCGCCCAT
CTGCCAGGTCGTGCCACCGACACCCGTGCAAGACGTCGACAGCCAGCCGG
GCGGGGCAGGTTACATCAACGAACCAAGTAAACGCCGGGGCCGTCGGTTT
GGCCCGGGCCGCCGTCCGTGGCTGAACCGCAAGGCCGGCAAGGACATCGA
TGGGCGACAGCAGCCCTTTTGGCGACCTCGTCGGTTCTGGGAGGACTCGG
AACCAGAGGAAGAATCGCCTCGCGTGGCTCCGCGTTCGCCAGCTCCAGAC
CCCGAGGCGTCGGACCTAGTGATCAAGAACTCGTTGGGCATGCCGCAGCA
GCGCGTTGTGTTTGAGGGCCCTGCGCTTCGCAGCCCAGGTGCCAGGCGGC
GGCCCGAACAAGCCAGTCGACACCTCGCCAACCGCAGCACGCTCGTAGGA
AGCCAAGTCTTCAGCCCCGAGGCATTCTGCTCGCAGACATCGCTCCACCA
CCAGCGATTCCGGTCTTTGTCATGGTGGCGGCTGCGCTTGCGAACGAATA
AGATCCGTAACATCCGCAAACGAGTGCGACGCACGTGGCAGCGACACGCC
GAACACCGTCGGGAAGCCAAACGCGAGAAACTCAAGCAGAGTATCAGCGG
GGCAGTCCTGATGGAGTCGAGCACGCAGCTGAGAATACCAGAATGAATGC
CCGGCCTGGAAGTCGTGAACACGTCTCTCGCCTCACCAGGACACCTGGAT
CCGCCCCAGTTGAGGGCCCACAAGTCTCTACGACGAAGGCCAAATGTCCT
CTGGAGCCCTCCAGCCATCGAGGCAACGCCTCAACCTCAGCATGGCCGCC
CTTCAAATGCCACCCCGTTGGCAGCCGCTCTTGTCCGTCCTATAACGCCG
CCTGGAGTTGCTCAGAGCGAAGACCTCATGAGCAGCGGAACAAGCACGCC
AAAAGCTACTTCATCCTACTCCGTGAACGGGGCGGTGACCTCCAAGCCGT
CCCATCCACCCACGCCTGAAACTACTCCCCCGCGTGTCGCTCCTTCAGCC
CCGCGTCCGGGACTGTCGCACTTTGGACTGTCCTCTTCCTCCTCATCGCA
CGCCGAGTCGTTTCGGACAGCTTATGAAATGATCTCGGACGCGGAGACGG
AAACTCCTCGCCAGTCGACGCAGTCGTTGTTGCCTACCAGACAGAAATCG
TTGAGGAGGGACGAGCCGGCGGACTATGATGACCGAGGGAGTGGAGAGTC
GACACCGGTTCCTGATCCTCGTACTCAGCGCCTCCAACCGTCCGCGATGG
AGACTCCTGCGCAACGAAAGATGGATAATGGTGCGGAATCCAAGGTGTCG
CCGCCGCGCAAGAAGAAGTCTACGAGGAATGGAGTTCCTAGGATCCGTAA
TGCGGACGCAGAACAGGGCTACGATATGAATGGTCGAGAGACACAAAACA
CCAAAGCTCTTCCAGCACGCTCAAATTTACGGGAGTCTGTCAGGGATGCG
CAGGAACCAGTTGGTGGCTTATCCATTGAGCAGTTTCGCGAAGAGATTGG
CTGGCCACGTGCGGAGGACCAGCCTCACTCTGCCGAGCACGATGACGCTC
GCCGGCTGTCAGACGTTTCTATGTCCTCGTCCACTGTCGAGGTGATGATC
ATCGACGCACCAAGGTCCACCCGAAGATCCCTGCGCCATACCGATAAGAG
GGGCTCGCTGCGTTCGGCTAGTTCGCCTTTTCCCAGCCCAGAACATGCTT
CAACCGCTTCCAGCGCGGACTCGCAACATCGCCTGGTACACAAAGCTGGT
CGAATCACCGAGAGTGACCGCAAGAGCATCGCGTCGGAAATCTCGTTCTC
TGGGGCCTCCAGTGTGAACACCCAGCAACAAACCGTGGACGTGGTGCCAG
TGGTTGTGATCCCGGAACGACGCTCTTCCCTTAAGTCGTCCACTTCAACC
AGCAGGAATACCTCGCAAAGCCGCTCGCGCCACTCGAGTCGGCAGGGCCC
GTCCGCATCGGGTAGTCGGCCTGGCTCTCGCGAGCCTCCTCGTCAGAAGC
GCACATCCGACACGACTGCGAGCAGCACGAGGCGGGCGGAATCTCGTGGT
CGCCACTCTGGCCGACCGAGTATCCCGGCTCGCAGCTCCTCGCTCTCTGC
ACCAACCAGTCGTAATAATTCCCGGACTACATCTCTGACATCGGAGAGTC
TCCGGGATCATGCAATGTTTACGGAACAGGGGACTCATGATCGCGTTGCT
GAGCCGCCACGTCCAGCCAAAGCAGAGACCGTCGCTCGAGAGCCACACGA
TGCTGCGGAAGCATCCAAGACGCAGTCAATTATCATTGGAGTGGAAGACA
TGTCGCATCTGCGCCCGCCATCGATGCCGTACACACAAATCTCGATCCCC
TCATCTTCTCCTGGCCTGATCGAAGTCAGCGAGGCGAGGACTGTTGTATT
CTTCCCGCACAACAATGAATCATTGCTCTTGGTCGATCCGCAGGCCCCGT
CTGCACAGCGAGGGCAACCCGACTACCCTGAACTGTACCAACACAGGATG
GAAGAATCGCCCACTCAACGCTACGAGATGACATCCCCGCTCAAAGACCC
CCGCCAGCCACCACAACCGCCCATCTGCCAGGTCGTGCCACCGACACCCG
TGCAAGACGTCGACAGCCAGCCGGGCGGGGCAGGTTACATCAACGAACCA
AGTAAACGCCGGGGCCGTCGGTTTGGCCCGGGCCGCCGTCCGTGGCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005169-T1.utr3p1 | KJC3_005169-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005169-T1.utr5p1 | KJC3_005169-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1781372..1784991 - |
|
