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KJC3_005185-T1, KJC3_005185-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005185-T1
Unique NameKJC3_005185-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1841125..1842251-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005185-T1 ID=KJC3_005185-T1|Name=KJC3_005185-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1127bp|location=Sequence derived from alignment at ch4:1841125..1842251- (Aspergillus niger KJC3)
ATCTGATTCCATATACAGCACTACCCCCATAATGGCAAGCCTATTCACAG
AAACAACCCCATCAAGAATCAAAGACACAAAAGTAAAACCCAAACCCAAA
CCCACCATCATTGTCTTTCCCTATACTATACTGAGTATTCTCATACTAAG
GATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAA
TAATAGGGCCTCCACCTCCTAACAACCTCCACCCCCAACGGCAAAAAAGT
CCAAATCCTCCTCGAAGAACTCAAAGACATCTACGGATTACGATGGACAA
CATCCCTAATCGACCTCGACACCGACGAGCAGAAGCAGCCATGGTTTCTG
GCGTTTAATCCCAACGGTAAGCCATAATTCATCCCCTCTTCTTTCTTTTT
TCCTTGTGACCTACCTAGAACAAGTATGTAGATAAATACTGAACAAACAA
ACCCATACAGGAAAAATCCCCCTCCTCATCGACAACAACTCATCCAGCAA
CTCAGACCCAATCCCAGTCATGGAATCAGCCGCCGAACTCCTCTACCTCG
TAGAAACTTACGACCCGGATCACCATTTCCACTTCTCGTCGGCAATCCAC
CGATCCCAGCTCCTCCAGTGGTTGATCTTCTGGTCTGCGTCGGGTCAGCC
GCAGCAGGCGGGGTTGAATCATTTTGCTCGGTTCGCGGCGGTGGAGGTTC
CTTGTAAGCACACACACCCTATTTCAGTTCTTGTGGTTCTATAGGAGATA
TCTAATTTACTTATTGCTTTTGGGGAATAGACGCTGTTGAGAGATTTAAG
GCTGAGACGCTTCGGATTTACAGCGTGCTGGAATTGCATTTGTCCAATGG
TTTGGCTGGTGGTGGTGGTGGTGGTGGTGATGAGACTAGGGAGTACTTGG
TGGGCGAGGGACGAGGGAAATACAGCATCGCGGATATTAATGCGTATGCG
TGGGTGCGGGCGTGGAAGAGAATGACGATCACGGAGGAGGAGATGGATGG
GTTTCCGCTGCTGAGGAAGTGGATTGAGCGGATTGGGGAGAGGCCGGCGG
TGGTGAGGGGGGTTGGGGATGGGTATGATGAGGAGGTGCATCCTGAGTTA
CTACTTACTGCGAAGCAGGGTAGATAG
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Coding sequence (CDS) from alignment at ch4:1841125..1842251-

>KJC3_005185-T1 ID=KJC3_005185-T1|Name=KJC3_005185-T1|organism=Aspergillus niger KJC3|type=CDS|length=3204bp|location=Sequence derived from alignment at ch4:1841125..1842251- (Aspergillus niger KJC3)
ACGCTGTTGAGAGATTTAAGGCTGAGACGCTTCGGATTTACAGCGTGCTG
GAATTGCATTTGTCCAATGGTTTGGCTGGTGGTGGTGGTGGTGGTGGTGA
TGAGACTAGGGAGTACTTGGTGGGCGAGGGACGAGGGAAATACAGCATCG
CGGATATTAATGCGTATGCGTGGGTGCGGGCGTGGAAGAGAATGACGATC
ACGGAGGAGGAGATGGATGGGTTTCCGCTGCTGAGGAAGTGGATTGAGCG
GATTGGGGAGAGGCCGGCGGTGGTGAGGGGGGTTGGGGATGGGTATGATG
AGGAGGTGCATCCTGAGTTACTACTTACTGCGAAGCAGGGTAGATAGGAA
AAATCCCCCTCCTCATCGACAACAACTCATCCAGCAACTCAGACCCAATC
CCAGTCATGGAATCAGCCGCCGAACTCCTCTACCTCGTAGAAACTTACGA
CCCGGATCACCATTTCCACTTCTCGTCGGCAATCCACCGATCCCAGCTCC
TCCAGTGGTTGATCTTCTGGTCTGCGTCGGGTCAGCCGCAGCAGGCGGGG
TTGAATCATTTTGCTCGGTTCGCGGCGGTGGAGGTTCCTTGGCCTCCACC
TCCTAACAACCTCCACCCCCAACGGCAAAAAAGTCCAAATCCTCCTCGAA
GAACTCAAAGACATCTACGGATTACGATGGACAACATCCCTAATCGACCT
CGACACCGACGAGCAGAAGCAGCCATGGTTTCTGGCGTTTAATCCCAACG
ATGGCAAGCCTATTCACAGAAACAACCCCATCAAGAATCAAAGACACAAA
AACGCTGTTGAGAGATTTAAGGCTGAGACGCTTCGGATTTACAGCGTGCT
GGAATTGCATTTGTCCAATGGTTTGGCTGGTGGTGGTGGTGGTGGTGGTG
ATGAGACTAGGGAGTACTTGGTGGGCGAGGGACGAGGGAAATACAGCATC
GCGGATATTAATGCGTATGCGTGGGTGCGGGCGTGGAAGAGAATGACGAT
CACGGAGGAGGAGATGGATGGGTTTCCGCTGCTGAGGAAGTGGATTGAGC
GGATTGGGGAGAGGCCGGCGGTGGTGAGGGGGGTTGGGGATGGGTATGAT
GAGGAGGTGCATCCTGAGTTACTACTTACTGCGAAGCAGGGTAGATAGGA
AAAATCCCCCTCCTCATCGACAACAACTCATCCAGCAACTCAGACCCAAT
CCCAGTCATGGAATCAGCCGCCGAACTCCTCTACCTCGTAGAAACTTACG
ACCCGGATCACCATTTCCACTTCTCGTCGGCAATCCACCGATCCCAGCTC
CTCCAGTGGTTGATCTTCTGGTCTGCGTCGGGTCAGCCGCAGCAGGCGGG
GTTGAATCATTTTGCTCGGTTCGCGGCGGTGGAGGTTCCTTGGCCTCCAC
CTCCTAACAACCTCCACCCCCAACGGCAAAAAAGTCCAAATCCTCCTCGA
AGAACTCAAAGACATCTACGGATTACGATGGACAACATCCCTAATCGACC
TCGACACCGACGAGCAGAAGCAGCCATGGTTTCTGGCGTTTAATCCCAAC
GATGGCAAGCCTATTCACAGAAACAACCCCATCAAGAATCAAAGACACAA
AAACGCTGTTGAGAGATTTAAGGCTGAGACGCTTCGGATTTACAGCGTGC
TGGAATTGCATTTGTCCAATGGTTTGGCTGGTGGTGGTGGTGGTGGTGGT
GATGAGACTAGGGAGTACTTGGTGGGCGAGGGACGAGGGAAATACAGCAT
CGCGGATATTAATGCGTATGCGTGGGTGCGGGCGTGGAAGAGAATGACGA
TCACGGAGGAGGAGATGGATGGGTTTCCGCTGCTGAGGAAGTGGATTGAG
CGGATTGGGGAGAGGCCGGCGGTGGTGAGGGGGGTTGGGGATGGGTATGA
TGAGGAGGTGCATCCTGAGTTACTACTTACTGCGAAGCAGGGTAGATAGG
AAAAATCCCCCTCCTCATCGACAACAACTCATCCAGCAACTCAGACCCAA
TCCCAGTCATGGAATCAGCCGCCGAACTCCTCTACCTCGTAGAAACTTAC
GACCCGGATCACCATTTCCACTTCTCGTCGGCAATCCACCGATCCCAGCT
CCTCCAGTGGTTGATCTTCTGGTCTGCGTCGGGTCAGCCGCAGCAGGCGG
GGTTGAATCATTTTGCTCGGTTCGCGGCGGTGGAGGTTCCTTGGCCTCCA
CCTCCTAACAACCTCCACCCCCAACGGCAAAAAAGTCCAAATCCTCCTCG
AAGAACTCAAAGACATCTACGGATTACGATGGACAACATCCCTAATCGAC
CTCGACACCGACGAGCAGAAGCAGCCATGGTTTCTGGCGTTTAATCCCAA
CGATGGCAAGCCTATTCACAGAAACAACCCCATCAAGAATCAAAGACACA
AAAACGCTGTTGAGAGATTTAAGGCTGAGACGCTTCGGATTTACAGCGTG
CTGGAATTGCATTTGTCCAATGGTTTGGCTGGTGGTGGTGGTGGTGGTGG
TGATGAGACTAGGGAGTACTTGGTGGGCGAGGGACGAGGGAAATACAGCA
TCGCGGATATTAATGCGTATGCGTGGGTGCGGGCGTGGAAGAGAATGACG
ATCACGGAGGAGGAGATGGATGGGTTTCCGCTGCTGAGGAAGTGGATTGA
GCGGATTGGGGAGAGGCCGGCGGTGGTGAGGGGGGTTGGGGATGGGTATG
ATGAGGAGGTGCATCCTGAGTTACTACTTACTGCGAAGCAGGGTAGATAG
GAAAAATCCCCCTCCTCATCGACAACAACTCATCCAGCAACTCAGACCCA
ATCCCAGTCATGGAATCAGCCGCCGAACTCCTCTACCTCGTAGAAACTTA
CGACCCGGATCACCATTTCCACTTCTCGTCGGCAATCCACCGATCCCAGC
TCCTCCAGTGGTTGATCTTCTGGTCTGCGTCGGGTCAGCCGCAGCAGGCG
GGGTTGAATCATTTTGCTCGGTTCGCGGCGGTGGAGGTTCCTTGGCCTCC
ACCTCCTAACAACCTCCACCCCCAACGGCAAAAAAGTCCAAATCCTCCTC
GAAGAACTCAAAGACATCTACGGATTACGATGGACAACATCCCTAATCGA
CCTCGACACCGACGAGCAGAAGCAGCCATGGTTTCTGGCGTTTAATCCCA
ACGATGGCAAGCCTATTCACAGAAACAACCCCATCAAGAATCAAAGACAC
AAAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005185KJC3_005185Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005185-T1KJC3_005185-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005185-T1.cdsKJC3_005185-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005185-T1.exon4KJC3_005185-T1.exon4Aspergillus niger KJC3exon
KJC3_005185-T1.exon3KJC3_005185-T1.exon3Aspergillus niger KJC3exon
KJC3_005185-T1.exon2KJC3_005185-T1.exon2Aspergillus niger KJC3exon
KJC3_005185-T1.exon1KJC3_005185-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005185-T1.utr5p1KJC3_005185-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR004045
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1841125..1842251 -
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