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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1862082..1863114+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005190-T1 ID=KJC3_005190-T1|Name=KJC3_005190-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1033bp|location=Sequence derived from alignment at ch4:1862082..1863114+ (Aspergillus niger KJC3)
ATGTTCTCCCGAAGCCTGAGGTCAACAATAACCCCACCTTGCTCGCCCTT
CGCTTCTCGTCCCCTCTTCTCCATCCCCAATTGCAAGCAATCTTCCTTCC
TCTCTCTTCGTCCTTTCCATCAATCATCCGCAGCCATGTCTGGAAACACC
AAGGCCTTCTTTGATATCCAGTACGCCCCCGTGGGCTCCAGCGCCCGTAA
GTTGTTCTCTTCTTCTTCTTCTCATCGTCCTTCTACTGCTGTCGTCACCC
TTTTTCTGCATGGATGATTTTACCCCTCCTTTGAAGAGAAAGTGGGAGTA
CTGGGGGGGGCTTTCCAAAGAAAGCACTCCCACAATCACGAATCTCTTTT
CCTGCCCTTTGATTGACGTCTATCCTCTCAATGGTTACTGGATCCTTTGG
CTGACTTTGACCTCTTCCCCTGCTCTCTAGCCAAGACGGGCCGTGTCGTC
TTCAACCTCTTCGAGAAGGACGTCCCCAAGACTGCTAAGAACTTCCGTGA
GCTCTGCAAGCTTCCCCAGGGTCAGGGTTACAAGGGCTCTACCTTCCACC
GTGTCATCCCCCAGTTCATGCTCCAGGGTGGTGACTTCACCCGCCACAAC
GTGAGTAATCCTGCTATTGTGACCTCGCCTCCGTGGGCGGCTGTATGAGA
GAGAACAATTTGACTGATATAATCATCCAGGGTACCGGTGGTCGCTCCAT
CTACGGTGAGAAGTTCGCCGATGAGAACTTCATCTACAAGCACAACAAGC
CCGGTCTCCTCTCCATGGCCAACGCTGGTCCCAACACGTAAGTTCTAGTT
CTGTCGCTCGTAAATCTAGGCCCCAGGCAGCTAACAGCATCTGCAGCAAC
GGCTCCCAGTTCTTCATCACCACCGTTGTCACCTCTTGGCTCGATGGCAA
GCACGTCGTCTTCGGTGAGGTTGCCGATGCCGAGTCCATGCAGGTCGTGA
AGGAGATCGAGGCTCTCGGCTCCTCCTCCGGCTCCGTCCGCTCTGCCGTC
AAGCCCACCATCGTCGACTGCGGTGAGTTGTAA back to topCoding sequence (CDS) from alignment at ch4:1862082..1863114+ >KJC3_005190-T1 ID=KJC3_005190-T1|Name=KJC3_005190-T1|organism=Aspergillus niger KJC3|type=CDS|length=2640bp|location=Sequence derived from alignment at ch4:1862082..1863114+ (Aspergillus niger KJC3)
ATGTTCTCCCGAAGCCTGAGGTCAACAATAACCCCACCTTGCTCGCCCTT
CGCTTCTCGTCCCCTCTTCTCCATCCCCAATTGCAAGCAATCTTCCTTCC
TCTCTCTTCGTCCTTTCCATCAATCATCCGCAGCCATGTCTGGAAACACC
AAGGCCTTCTTTGATATCCAGTACGCCCCCGTGGGCTCCAGCGCCCCCAA
GACGGGCCGTGTCGTCTTCAACCTCTTCGAGAAGGACGTCCCCAAGACTG
CTAAGAACTTCCGTGAGCTCTGCAAGCTTCCCCAGGGTCAGGGTTACAAG
GGCTCTACCTTCCACCGTGTCATCCCCCAGTTCATGCTCCAGGGTGGTGA
CTTCACCCGCCACAACGGTACCGGTGGTCGCTCCATCTACGGTGAGAAGT
TCGCCGATGAGAACTTCATCTACAAGCACAACAAGCCCGGTCTCCTCTCC
ATGGCCAACGCTGGTCCCAACACCAACGGCTCCCAGTTCTTCATCACCAC
CGTTGTCACCTCTTGGCTCGATGGCAAGCACGTCGTCTTCGGTGAGGTTG
CCGATGCCGAGTCCATGCAGGTCGTGAAGGAGATCGAGGCTCTCGGCTCC
TCCTCCGGCTCCGTCCGCTCTGCCGTCAAGCCCACCATCGTCGACTGCGG
TGAGTTGTAAATGTTCTCCCGAAGCCTGAGGTCAACAATAACCCCACCTT
GCTCGCCCTTCGCTTCTCGTCCCCTCTTCTCCATCCCCAATTGCAAGCAA
TCTTCCTTCCTCTCTCTTCGTCCTTTCCATCAATCATCCGCAGCCATGTC
TGGAAACACCAAGGCCTTCTTTGATATCCAGTACGCCCCCGTGGGCTCCA
GCGCCCCCAAGACGGGCCGTGTCGTCTTCAACCTCTTCGAGAAGGACGTC
CCCAAGACTGCTAAGAACTTCCGTGAGCTCTGCAAGCTTCCCCAGGGTCA
GGGTTACAAGGGCTCTACCTTCCACCGTGTCATCCCCCAGTTCATGCTCC
AGGGTGGTGACTTCACCCGCCACAACGGTACCGGTGGTCGCTCCATCTAC
GGTGAGAAGTTCGCCGATGAGAACTTCATCTACAAGCACAACAAGCCCGG
TCTCCTCTCCATGGCCAACGCTGGTCCCAACACCAACGGCTCCCAGTTCT
TCATCACCACCGTTGTCACCTCTTGGCTCGATGGCAAGCACGTCGTCTTC
GGTGAGGTTGCCGATGCCGAGTCCATGCAGGTCGTGAAGGAGATCGAGGC
TCTCGGCTCCTCCTCCGGCTCCGTCCGCTCTGCCGTCAAGCCCACCATCG
TCGACTGCGGTGAGTTGTAAATGTTCTCCCGAAGCCTGAGGTCAACAATA
ACCCCACCTTGCTCGCCCTTCGCTTCTCGTCCCCTCTTCTCCATCCCCAA
TTGCAAGCAATCTTCCTTCCTCTCTCTTCGTCCTTTCCATCAATCATCCG
CAGCCATGTCTGGAAACACCAAGGCCTTCTTTGATATCCAGTACGCCCCC
GTGGGCTCCAGCGCCCCCAAGACGGGCCGTGTCGTCTTCAACCTCTTCGA
GAAGGACGTCCCCAAGACTGCTAAGAACTTCCGTGAGCTCTGCAAGCTTC
CCCAGGGTCAGGGTTACAAGGGCTCTACCTTCCACCGTGTCATCCCCCAG
TTCATGCTCCAGGGTGGTGACTTCACCCGCCACAACGGTACCGGTGGTCG
CTCCATCTACGGTGAGAAGTTCGCCGATGAGAACTTCATCTACAAGCACA
ACAAGCCCGGTCTCCTCTCCATGGCCAACGCTGGTCCCAACACCAACGGC
TCCCAGTTCTTCATCACCACCGTTGTCACCTCTTGGCTCGATGGCAAGCA
CGTCGTCTTCGGTGAGGTTGCCGATGCCGAGTCCATGCAGGTCGTGAAGG
AGATCGAGGCTCTCGGCTCCTCCTCCGGCTCCGTCCGCTCTGCCGTCAAG
CCCACCATCGTCGACTGCGGTGAGTTGTAAATGTTCTCCCGAAGCCTGAG
GTCAACAATAACCCCACCTTGCTCGCCCTTCGCTTCTCGTCCCCTCTTCT
CCATCCCCAATTGCAAGCAATCTTCCTTCCTCTCTCTTCGTCCTTTCCAT
CAATCATCCGCAGCCATGTCTGGAAACACCAAGGCCTTCTTTGATATCCA
GTACGCCCCCGTGGGCTCCAGCGCCCCCAAGACGGGCCGTGTCGTCTTCA
ACCTCTTCGAGAAGGACGTCCCCAAGACTGCTAAGAACTTCCGTGAGCTC
TGCAAGCTTCCCCAGGGTCAGGGTTACAAGGGCTCTACCTTCCACCGTGT
CATCCCCCAGTTCATGCTCCAGGGTGGTGACTTCACCCGCCACAACGGTA
CCGGTGGTCGCTCCATCTACGGTGAGAAGTTCGCCGATGAGAACTTCATC
TACAAGCACAACAAGCCCGGTCTCCTCTCCATGGCCAACGCTGGTCCCAA
CACCAACGGCTCCCAGTTCTTCATCACCACCGTTGTCACCTCTTGGCTCG
ATGGCAAGCACGTCGTCTTCGGTGAGGTTGCCGATGCCGAGTCCATGCAG
GTCGTGAAGGAGATCGAGGCTCTCGGCTCCTCCTCCGGCTCCGTCCGCTC
TGCCGTCAAGCCCACCATCGTCGACTGCGGTGAGTTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006457 | protein folding |
| GO:0000413 | protein peptidyl-prolyl isomerization |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020892 |
| DBxref | InterPro:IPR029000 |
| DBxref | InterPro:IPR002130 |
| DBxref | PFAM:PF00160 |
| Product | phosphatidylinositol transfer protein csr1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1862082..1863114 + |
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