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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1901554..1903086- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005204-T1 ID=KJC3_005204-T1|Name=KJC3_005204-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1533bp|location=Sequence derived from alignment at ch4:1901554..1903086- (Aspergillus niger KJC3)
CGAAGAAGCAAACGAAAGCGGGATCTCAATCGCAACCATCCAAGTAACAG
CACCAGCCACAACAACTACTCAATCCCTACAGGAACATACAGTATACTAT
ACTTCCATGCAAGCATCACCAGATACCCACCGCAAGCAGCCACTATAACA
ATCAACCGAATGGGTTTCGGCCGAAGCCTGCCTGCACTCCATCTACTTCA
GCCACCAGTTGTCTAGTAAACCGAGAAGTAAGATAATGGAATTGCAATTG
CAAAAATCATATGATCCACCCCAAAAGAAACCGAAAGAACATAATAAAGC
CAAGCTCAATACCCCTGCAAGTAGCACAAGCCAGCTAAGCCACGTCGAGA
TACAAATTGACCAGTTGGTTCGGAGGCTAACAAACAGCCAGCCCATAGTT
GATCCCGCACTGCACCGCAGCTAACCTAAGCTTGGCGGTCACTGCCCGCG
GCACCCCAGGTAACGTCACTGATTTACACCCATCCACCCACTTTACTTTC
TAACATTACAACCACAATATCAGACCATACGCCACTTTCCTCTACTCCTC
ACTCACATAATCCCCGCATCCTCTACTATTGTCAACAACAAGAATCTCTC
AGCCGCTCGATTCCCAACCTACCCACCGCTCTCTCGCGACATACCACCCA
CTAACCAACTACCCAAGCGTAAGCATGGCGCCCATCCGCCGCTACCTCCG
GATCAGCAAATACACAGTCCTCGAATGCCGGATCTACCTCGAGAACCCGT
CCGATATACGGTGGCTCCTGAACGCGCGTGACGCCGTGCTTCCACGCGTA
TTCGCAGCGATCCGGCCGCTCGTGCTGCCCAAACTACGCGAGGAGAATGA
GCGCTTATTTGCGAAGAAGAAGGGGAAGCCGGTGAAAGATGTTATCTCTG
AAGGTAAGCTATTATCTAATATGATTCATGTTTATTCTTCGGATATTGTG
GGGCTTGGTTCGCTTTAGAAGGGAGAGAATGGCTGATCATGCAATTCGTG
CAGAGGAATTCGATGTTGCGTTGTTTTTGCGCGAGTCGAGGACGCGCCAT
TCGCTTCTTACAAGGCATAAGGAGTTTGATGAGGATGAGGGGGGCTACGC
TGTGGGTAGGGGGACAGGGTCTGGTCCTGGTGGGGCTGGGGCTGGGATAT
TGATTGAGAGTGATGATGAAGGAGAGGGTTTGGAGATGCGGGATATTCCA
CAGGCGACTAGTGATGATGATGGCGCGGGGGCGAAACGTCAGCGGGATGA
TGCTGATGGGCAGTCTGATGACTCGCCGGAGCGGCAGCGTACATCGAAGC
GGAGGAAGGATGATGGTACGCTATCGCGAGATGCAGATGATGGCGATGAC
AAGAAGATGCGCTTCAGGACCAACTACGAGGGATTCAATATCTACGGCTG
GGTGCTGTGTCTGCTTGTCACGCGGAAAGGTGACAAGACGGGAACAAGAG
CTGCCACGGCAGAACCTGGTCGTCAGGTCCTCATGGAGGAATGGATATCA
ACCCAGGCGCAAGGCGATCTGCCCGAAGAATAA back to topCoding sequence (CDS) from alignment at ch4:1901554..1903086- >KJC3_005204-T1 ID=KJC3_005204-T1|Name=KJC3_005204-T1|organism=Aspergillus niger KJC3|type=CDS|length=1518bp|location=Sequence derived from alignment at ch4:1901554..1903086- (Aspergillus niger KJC3)
AGGAATTCGATGTTGCGTTGTTTTTGCGCGAGTCGAGGACGCGCCATTCG
CTTCTTACAAGGCATAAGGAGTTTGATGAGGATGAGGGGGGCTACGCTGT
GGGTAGGGGGACAGGGTCTGGTCCTGGTGGGGCTGGGGCTGGGATATTGA
TTGAGAGTGATGATGAAGGAGAGGGTTTGGAGATGCGGGATATTCCACAG
GCGACTAGTGATGATGATGGCGCGGGGGCGAAACGTCAGCGGGATGATGC
TGATGGGCAGTCTGATGACTCGCCGGAGCGGCAGCGTACATCGAAGCGGA
GGAAGGATGATGGTACGCTATCGCGAGATGCAGATGATGGCGATGACAAG
AAGATGCGCTTCAGGACCAACTACGAGGGATTCAATATCTACGGCTGGGT
GCTGTGTCTGCTTGTCACGCGGAAAGGTGACAAGACGGGAACAAGAGCTG
CCACGGCAGAACCTGGTCGTCAGGTCCTCATGGAGGAATGGATATCAACC
CAGGCGCAAGGCGATCTGCCCGAAGAATAAATGGCGCCCATCCGCCGCTA
CCTCCGGATCAGCAAATACACAGTCCTCGAATGCCGGATCTACCTCGAGA
ACCCGTCCGATATACGGTGGCTCCTGAACGCGCGTGACGCCGTGCTTCCA
CGCGTATTCGCAGCGATCCGGCCGCTCGTGCTGCCCAAACTACGCGAGGA
GAATGAGCGCTTATTTGCGAAGAAGAAGGGGAAGCCGGTGAAAGATGTTA
TCTCTGAAGAGGAATTCGATGTTGCGTTGTTTTTGCGCGAGTCGAGGACG
CGCCATTCGCTTCTTACAAGGCATAAGGAGTTTGATGAGGATGAGGGGGG
CTACGCTGTGGGTAGGGGGACAGGGTCTGGTCCTGGTGGGGCTGGGGCTG
GGATATTGATTGAGAGTGATGATGAAGGAGAGGGTTTGGAGATGCGGGAT
ATTCCACAGGCGACTAGTGATGATGATGGCGCGGGGGCGAAACGTCAGCG
GGATGATGCTGATGGGCAGTCTGATGACTCGCCGGAGCGGCAGCGTACAT
CGAAGCGGAGGAAGGATGATGGTACGCTATCGCGAGATGCAGATGATGGC
GATGACAAGAAGATGCGCTTCAGGACCAACTACGAGGGATTCAATATCTA
CGGCTGGGTGCTGTGTCTGCTTGTCACGCGGAAAGGTGACAAGACGGGAA
CAAGAGCTGCCACGGCAGAACCTGGTCGTCAGGTCCTCATGGAGGAATGG
ATATCAACCCAGGCGCAAGGCGATCTGCCCGAAGAATAAATGGCGCCCAT
CCGCCGCTACCTCCGGATCAGCAAATACACAGTCCTCGAATGCCGGATCT
ACCTCGAGAACCCGTCCGATATACGGTGGCTCCTGAACGCGCGTGACGCC
GTGCTTCCACGCGTATTCGCAGCGATCCGGCCGCTCGTGCTGCCCAAACT
ACGCGAGGAGAATGAGCGCTTATTTGCGAAGAAGAAGGGGAAGCCGGTGA
AAGATGTTATCTCTGAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005204-T1.utr5p1 | KJC3_005204-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1901554..1903086 - |
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