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KJC3_005212-T1, KJC3_005212-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005212-T1
Unique NameKJC3_005212-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1938184..1939487-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005212-T1 ID=KJC3_005212-T1|Name=KJC3_005212-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1304bp|location=Sequence derived from alignment at ch4:1938184..1939487- (Aspergillus niger KJC3)
GGAAAAGGCTGTTCCCCAGCCCTGTTGTAGCCAACGACTCTATATATCAG
CCTGCACAGTTACCCATTGTTCGTGAAATAAACTTTTCTGCACGATCAAT
TCTTCACATTGTCCTCTCAAAACGGTTCTCTGCATTGTTCAACCGAGAAA
TAAACTCTTTACGACTCGCACGCGACACCAGAGACCTGAACCTTCCCCGC
CTCAACACCATGTCTCTTAAGCGCAAGGCCTCGGTTCCCAGTCTCACATC
ATCCAATCCTGCTCCTGTGTTGTCACGACCATCATTTGTGGCAGATGATT
CTCCCAAGCACCTCCACAGTCGCACCCGCAAGCGCTTCAGGAACGATCGC
CCGGATGACGAAGTAGTCTATGGTATGTGTCCTGGAAGAGTGCACCTATA
CAATCTGAGAGCGATTGTCTCACATGGAGTAGAAAACACAATGCGATGGC
TTTTTACGGCTCAACAACAACAACAACACCAAGCTCCCACTCCTTCCATA
GACGAGGACGAGGCAACTGAGCCAGAACCTGTACCATCGTCCGAAATTGT
CGACCCTCGCCAACAGACATTGCTCAAATTCTTCCGACCTTCCCAATCCA
CACCCTCCCACATCCGCATGAACAAGCTGGATCAACAATCGAACCATGTC
ATACCACTCCAGACAACCACCTTTCAATCGCCCAACTTCAATTTGTCCTC
GCCAGTTACTTCGACTGGCTGGAGTACAAGTAGCCCACCTTCGCAGCTCA
CGGGCAGTGATATGGACATGGACTCGATAACCAACGAGTCAGTCCAAGAA
CCTCGGAGACCACCCGGAGGGTGTGGTTGGGCATGAGTGCTCGATCATGT
CTAGGGTGCATTTCACCCATAGCGTGCGATACCGACGACATTACTTCTTT
TAGCGATGATACCTTGACTTACCTTACCTTAATATTTATCGGCGCGGACC
AATGTGCTGGTCATATTGGTCGCGTCACGACGCTGCCACTTGACATACGT
TGCAAGGCGTATTCATCTGCATGTCTTCCTTTACTGGAGGCATGAATCAA
AGCAGCCCGGGACCTACTTCTCTTGCCCGAAATGGCTGCCAAGATACTCG
AGTTGAAGTCACTCCGAGCTACCTCGGCGACCGAGTTGCAGATGATATAG
ACGAAATGATGTATATAGTTTCCAAGAAGTGTTGAGGATCGTTATACCAC
TATATACTAGGCGACGCAAACAATAATTTCACGTAATTATTATGGTGAAC
AAGGTGCAGCAGTTTGTGCTTTAATTACACGTATCTAGCTCCTTTTAATG
ATAG
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Coding sequence (CDS) from alignment at ch4:1938184..1939487-

>KJC3_005212-T1 ID=KJC3_005212-T1|Name=KJC3_005212-T1|organism=Aspergillus niger KJC3|type=CDS|length=1134bp|location=Sequence derived from alignment at ch4:1938184..1939487- (Aspergillus niger KJC3)
AAAACACAATGCGATGGCTTTTTACGGCTCAACAACAACAACAACACCAA
GCTCCCACTCCTTCCATAGACGAGGACGAGGCAACTGAGCCAGAACCTGT
ACCATCGTCCGAAATTGTCGACCCTCGCCAACAGACATTGCTCAAATTCT
TCCGACCTTCCCAATCCACACCCTCCCACATCCGCATGAACAAGCTGGAT
CAACAATCGAACCATGTCATACCACTCCAGACAACCACCTTTCAATCGCC
CAACTTCAATTTGTCCTCGCCAGTTACTTCGACTGGCTGGAGTACAAGTA
GCCCACCTTCGCAGCTCACGGGCAGTGATATGGACATGGACTCGATAACC
AACGAGTCAGTCCAAGAACCTCGGAGACCACCCGGAGGGTGTGGTTGGGC
ATGAATGTCTCTTAAGCGCAAGGCCTCGGTTCCCAGTCTCACATCATCCA
ATCCTGCTCCTGTGTTGTCACGACCATCATTTGTGGCAGATGATTCTCCC
AAGCACCTCCACAGTCGCACCCGCAAGCGCTTCAGGAACGATCGCCCGGA
TGACGAAGTAGTCTATGAAAACACAATGCGATGGCTTTTTACGGCTCAAC
AACAACAACAACACCAAGCTCCCACTCCTTCCATAGACGAGGACGAGGCA
ACTGAGCCAGAACCTGTACCATCGTCCGAAATTGTCGACCCTCGCCAACA
GACATTGCTCAAATTCTTCCGACCTTCCCAATCCACACCCTCCCACATCC
GCATGAACAAGCTGGATCAACAATCGAACCATGTCATACCACTCCAGACA
ACCACCTTTCAATCGCCCAACTTCAATTTGTCCTCGCCAGTTACTTCGAC
TGGCTGGAGTACAAGTAGCCCACCTTCGCAGCTCACGGGCAGTGATATGG
ACATGGACTCGATAACCAACGAGTCAGTCCAAGAACCTCGGAGACCACCC
GGAGGGTGTGGTTGGGCATGAATGTCTCTTAAGCGCAAGGCCTCGGTTCC
CAGTCTCACATCATCCAATCCTGCTCCTGTGTTGTCACGACCATCATTTG
TGGCAGATGATTCTCCCAAGCACCTCCACAGTCGCACCCGCAAGCGCTTC
AGGAACGATCGCCCGGATGACGAAGTAGTCTATG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005212KJC3_005212Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005212-T1KJC3_005212-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005212-T1.cdsKJC3_005212-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005212-T1.utr3p1KJC3_005212-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005212-T1.exon2KJC3_005212-T1.exon2Aspergillus niger KJC3exon
KJC3_005212-T1.exon1KJC3_005212-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005212-T1.utr5p1KJC3_005212-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1938184..1939487 -
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