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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1940160..1941372+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005213-T1 ID=KJC3_005213-T1|Name=KJC3_005213-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1213bp|location=Sequence derived from alignment at ch4:1940160..1941372+ (Aspergillus niger KJC3)
ATGGATGCTCGTGAAGATAGTCATGCTGGTTCATGGTACTCCGACGATAA
ATCCACCTTGTCCTATCAACTTGACCACTGGTTGCAAGAGGTACCGGATG
AGATCGAGGGCATCGGCCAACTACCAGTGCCTGGTGCACGAATGATCATT
GCGCCGTATGTATCGAAAAGAGCAATTTTGCATCTTGCTTCCTTGTCCTA
ATTTCTTCTCAGGCACGCAGGCTATGCATACTCCGGACGATGTGCCGCTT
TCGCCTATAAGGCCCTGGACCTGTCACAAGCGTGAGTAATAGCCCTCTAG
CCTCACTCTCGCTATCCACTGAAGCAAATAACTATACAGCAAAAGAATTT
TCGTTGTCGGACCATCGCATCACCATTACTTCACGACGCTTGCGCTTCCT
GAGTTCACTTCGTACCATACCCCGCTCTCCGACGACCCTCTACCGCTTGA
TACCGAGTTCATTGCCAAGCTACGTTCAACCAGAGCAGGGTCACGAAACG
GGCTAGAATTGCAATTTACCACTATGTCTCGCTCCGTGGACGAAGCTGAA
CACAGTATCGAACTGCATTTACCTTATATCCACCGTCTCCTACAACGCCA
GCGTCCGAATCAGCCAACATCTGAATATCCGCCACTGGTCCCTATCTTGG
TGGGTGCTGTTACTGAGTCGACCGAGAAGGCTTTCGGAGCTTTGCTTGCT
CCGTATATTGATGATCCAGAGAATGCTTTTGTCATCAGCTCCGATTTCTG
TCATTGGGGGCAGCGGTTCCGTTACACGTACTACACCCCCCAGGCTCCTA
ACCCTGGGCCCAGCATTCCCGTTTCCGCTCCAGGCCTCCCTCAACCCGGT
ATTGATAGCGATAATGTAACCGATCAAATGGAAATGGTGTCTACCGGTCG
CTCCTTGAAGTCGCGGGACCGGATTAGGAGCCGAGAACCACCTATTCACG
AGAGTATCTCGGCAGTCGACCTTGCGACCATGGCAGCAATTACCACCGGA
GAGTACGCGCGCTTCTCGACGATACTCAAGAATACAGGGAACACTGTGTG
TGGCCGTCACCCCATCGGCGTGATAATGGCTGGTATCGAAGAGATTAGAA
AGAATGAAGGGGAAAAGGGCAGGTTTCACTTCATCCGATATGACCGCAGT
TCAAATGTGATAGAGGTGGACGATAGCTCTGTGAGCTATGTTTCTGCCTT
TACCGTGCTCTAG back to topCoding sequence (CDS) from alignment at ch4:1940160..1941372+ >KJC3_005213-T1 ID=KJC3_005213-T1|Name=KJC3_005213-T1|organism=Aspergillus niger KJC3|type=CDS|length=3294bp|location=Sequence derived from alignment at ch4:1940160..1941372+ (Aspergillus niger KJC3)
ATGGATGCTCGTGAAGATAGTCATGCTGGTTCATGGTACTCCGACGATAA
ATCCACCTTGTCCTATCAACTTGACCACTGGTTGCAAGAGGTACCGGATG
AGATCGAGGGCATCGGCCAACTACCAGTGCCTGGTGCACGAATGATCATT
GCGCCGCACGCAGGCTATGCATACTCCGGACGATGTGCCGCTTTCGCCTA
TAAGGCCCTGGACCTGTCACAAGCCAAAAGAATTTTCGTTGTCGGACCAT
CGCATCACCATTACTTCACGACGCTTGCGCTTCCTGAGTTCACTTCGTAC
CATACCCCGCTCTCCGACGACCCTCTACCGCTTGATACCGAGTTCATTGC
CAAGCTACGTTCAACCAGAGCAGGGTCACGAAACGGGCTAGAATTGCAAT
TTACCACTATGTCTCGCTCCGTGGACGAAGCTGAACACAGTATCGAACTG
CATTTACCTTATATCCACCGTCTCCTACAACGCCAGCGTCCGAATCAGCC
AACATCTGAATATCCGCCACTGGTCCCTATCTTGGTGGGTGCTGTTACTG
AGTCGACCGAGAAGGCTTTCGGAGCTTTGCTTGCTCCGTATATTGATGAT
CCAGAGAATGCTTTTGTCATCAGCTCCGATTTCTGTCATTGGGGGCAGCG
GTTCCGTTACACGTACTACACCCCCCAGGCTCCTAACCCTGGGCCCAGCA
TTCCCGTTTCCGCTCCAGGCCTCCCTCAACCCGGTATTGATAGCGATAAT
GTAACCGATCAAATGGAAATGGTGTCTACCGGTCGCTCCTTGAAGTCGCG
GGACCGGATTAGGAGCCGAGAACCACCTATTCACGAGAGTATCTCGGCAG
TCGACCTTGCGACCATGGCAGCAATTACCACCGGAGAGTACGCGCGCTTC
TCGACGATACTCAAGAATACAGGGAACACTGTGTGTGGCCGTCACCCCAT
CGGCGTGATAATGGCTGGTATCGAAGAGATTAGAAAGAATGAAGGGGAAA
AGGGCAGGTTTCACTTCATCCGATATGACCGCAGTTCAAATGTGATAGAG
GTGGACGATAGCTCTGTGAGCTATGTTTCTGCCTTTACCGTGCTCTAGAT
GGATGCTCGTGAAGATAGTCATGCTGGTTCATGGTACTCCGACGATAAAT
CCACCTTGTCCTATCAACTTGACCACTGGTTGCAAGAGGTACCGGATGAG
ATCGAGGGCATCGGCCAACTACCAGTGCCTGGTGCACGAATGATCATTGC
GCCGCACGCAGGCTATGCATACTCCGGACGATGTGCCGCTTTCGCCTATA
AGGCCCTGGACCTGTCACAAGCCAAAAGAATTTTCGTTGTCGGACCATCG
CATCACCATTACTTCACGACGCTTGCGCTTCCTGAGTTCACTTCGTACCA
TACCCCGCTCTCCGACGACCCTCTACCGCTTGATACCGAGTTCATTGCCA
AGCTACGTTCAACCAGAGCAGGGTCACGAAACGGGCTAGAATTGCAATTT
ACCACTATGTCTCGCTCCGTGGACGAAGCTGAACACAGTATCGAACTGCA
TTTACCTTATATCCACCGTCTCCTACAACGCCAGCGTCCGAATCAGCCAA
CATCTGAATATCCGCCACTGGTCCCTATCTTGGTGGGTGCTGTTACTGAG
TCGACCGAGAAGGCTTTCGGAGCTTTGCTTGCTCCGTATATTGATGATCC
AGAGAATGCTTTTGTCATCAGCTCCGATTTCTGTCATTGGGGGCAGCGGT
TCCGTTACACGTACTACACCCCCCAGGCTCCTAACCCTGGGCCCAGCATT
CCCGTTTCCGCTCCAGGCCTCCCTCAACCCGGTATTGATAGCGATAATGT
AACCGATCAAATGGAAATGGTGTCTACCGGTCGCTCCTTGAAGTCGCGGG
ACCGGATTAGGAGCCGAGAACCACCTATTCACGAGAGTATCTCGGCAGTC
GACCTTGCGACCATGGCAGCAATTACCACCGGAGAGTACGCGCGCTTCTC
GACGATACTCAAGAATACAGGGAACACTGTGTGTGGCCGTCACCCCATCG
GCGTGATAATGGCTGGTATCGAAGAGATTAGAAAGAATGAAGGGGAAAAG
GGCAGGTTTCACTTCATCCGATATGACCGCAGTTCAAATGTGATAGAGGT
GGACGATAGCTCTGTGAGCTATGTTTCTGCCTTTACCGTGCTCTAGATGG
ATGCTCGTGAAGATAGTCATGCTGGTTCATGGTACTCCGACGATAAATCC
ACCTTGTCCTATCAACTTGACCACTGGTTGCAAGAGGTACCGGATGAGAT
CGAGGGCATCGGCCAACTACCAGTGCCTGGTGCACGAATGATCATTGCGC
CGCACGCAGGCTATGCATACTCCGGACGATGTGCCGCTTTCGCCTATAAG
GCCCTGGACCTGTCACAAGCCAAAAGAATTTTCGTTGTCGGACCATCGCA
TCACCATTACTTCACGACGCTTGCGCTTCCTGAGTTCACTTCGTACCATA
CCCCGCTCTCCGACGACCCTCTACCGCTTGATACCGAGTTCATTGCCAAG
CTACGTTCAACCAGAGCAGGGTCACGAAACGGGCTAGAATTGCAATTTAC
CACTATGTCTCGCTCCGTGGACGAAGCTGAACACAGTATCGAACTGCATT
TACCTTATATCCACCGTCTCCTACAACGCCAGCGTCCGAATCAGCCAACA
TCTGAATATCCGCCACTGGTCCCTATCTTGGTGGGTGCTGTTACTGAGTC
GACCGAGAAGGCTTTCGGAGCTTTGCTTGCTCCGTATATTGATGATCCAG
AGAATGCTTTTGTCATCAGCTCCGATTTCTGTCATTGGGGGCAGCGGTTC
CGTTACACGTACTACACCCCCCAGGCTCCTAACCCTGGGCCCAGCATTCC
CGTTTCCGCTCCAGGCCTCCCTCAACCCGGTATTGATAGCGATAATGTAA
CCGATCAAATGGAAATGGTGTCTACCGGTCGCTCCTTGAAGTCGCGGGAC
CGGATTAGGAGCCGAGAACCACCTATTCACGAGAGTATCTCGGCAGTCGA
CCTTGCGACCATGGCAGCAATTACCACCGGAGAGTACGCGCGCTTCTCGA
CGATACTCAAGAATACAGGGAACACTGTGTGTGGCCGTCACCCCATCGGC
GTGATAATGGCTGGTATCGAAGAGATTAGAAAGAATGAAGGGGAAAAGGG
CAGGTTTCACTTCATCCGATATGACCGCAGTTCAAATGTGATAGAGGTGG
ACGATAGCTCTGTGAGCTATGTTTCTGCCTTTACCGTGCTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262WFG |
| DBxref | InterPro:IPR002737 |
| DBxref | PFAM:PF01875 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1940160..1941372 + |
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