|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1945427..1947116+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005215-T1 ID=KJC3_005215-T1|Name=KJC3_005215-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1690bp|location=Sequence derived from alignment at ch4:1945427..1947116+ (Aspergillus niger KJC3)
GCCTGATGACCTGGCGGGCTGTCATACTATTTGCAGGATCTCCGCCTGAA
CCCCGGGCGAGCCAATGCCATCTGGCAGCGAGAACAGTTTGGTCTGTCTC
CGACTGTCTCCGGAGCAGCTTATCGGAGAGACTCGAGCACTTATCGTGGT
TTATCTCCCGCCGGCGCATTTAAACCACCGCCAGCCCCTGACCACATAGT
TCGCTGCATCTCACCGACTTTCTCGGATCTACTTTGCTTATGACCTGTTC
TGACCGGCACAATGATCTTCTCCGGTGAGGCTGTCTGTTGTTGATATCTC
CCGCCCCAACAGTGCCTCTGTTCCTCGCCATGGATCTGTTCGGTTAAGCC
TGGCGCTTACTGTCGGTTTCCCCTCTCCATCGCCTACTGCTGTCCTTCAG
CCCGGATCTCGCGTGATCGATTTCCATTTTCTACCTCACTTTGATCTGCT
TCTCTCAGATCATTGCGCATACTTGTGAACCCATCTTTACTCTTACTTTG
ACATCATGGCTTGTTGACGGGTTGATCCCGCCTTGTGCTTATACTTGTGC
TTCCTTGACTGTTTTCCATCTCGTCGTCTTTTGTCCACGTGCCATATCAC
GACGCCATGGCGCGCAGCAAGCAGGGGGTGTTTTCTTGGGAGGATGTGTT
GGCGCATCGCTACCAGAGTACGTATACCTTGTCCACAGTTACACTCCTAA
TATACTGGTAGCATATTAACCACCCATCACTCACCAGACAACAAACCATC
CGGGCTCCCCAGGTCACGACGATACAGCGCCGTTCAAGGCCAACGGACGT
CCTCTAAACCCGACACCAGAACGGAATGGACCATCCAATCGCAAAGCGCC
CTACTGGCCAAGCTATCGCCCGAGCTGCGACTCATGATCTGGGAGATGGT
CCTGGGCGGCATGCGCATCCACATCATCCAACGTCCGAACCGGCGAATGG
GCCATGTAGTCTGTCCCCAGACTAGCGCATGCGATATCTGTCGCGGCGGA
CTCCCAGGCATCAAAGAGTCGGCGGGTCTGCTGGCGCTGTCGATGACATG
TAAACAGATGTGAGTCACATCTCATATACCTACTACATAGTACAATATAC
TCATTGATACTCAGCTACTGCGAGTCTATCTATATGCTCTACTCGCTCAA
CACCTTTGAATTCAGCAATACCTGGTCGCTGACATACCTGCGACCCACCA
TTCCGGCCGACTTCTGGGACGCCATCCGCGAGGTCGAACTCCGCTGGGCG
TTCCCGGGCCACTGGCTCCCCTGCAAGGACCCCGTCAAGTCGGTCTACTT
CTCCGCTGGCCGGCAGCAGTGGGTGGAGACGTGTCTGGCTCTCACAGACA
TGCAGGGCTTGCAGACGTTCACGCTGCAGCTGAGTGGGAGCTGGTTCTGC
GAGCCGGTGGAAAAGATCCCGGTGTTCTTGGAACCGCTACGGGCGCTGCA
TCTGCGACAGCGATGGAAGTTGCAGCTGCCGAGGCAGCCATATTATGTAA
AGGAGATTCGGAATATTGATGGGGATTTGAGAAAGCGGGGGATTGAGTGT
GTGGTGAGGGTGGTTTAGCATTTTTGATAGCATGATAGCGTGTTGGCGAT
AATTTATACCCTTAATAGTTGCTGAGATATTTAATGGATGGGAATTGCGC
TTTGGAATATATTAATGAATGCATATTCTTTGTTGGTGTA back to topCoding sequence (CDS) from alignment at ch4:1945427..1947116+ >KJC3_005215-T1 ID=KJC3_005215-T1|Name=KJC3_005215-T1|organism=Aspergillus niger KJC3|type=CDS|length=2511bp|location=Sequence derived from alignment at ch4:1945427..1947116+ (Aspergillus niger KJC3)
ATGGCGCGCAGCAAGCAGGGGGTGTTTTCTTGGGAGGATGTGTTGGCGCA
TCGCTACCAGAACAACAAACCATCCGGGCTCCCCAGGTCACGACGATACA
GCGCCGTTCAAGGCCAACGGACGTCCTCTAAACCCGACACCAGAACGGAA
TGGACCATCCAATCGCAAAGCGCCCTACTGGCCAAGCTATCGCCCGAGCT
GCGACTCATGATCTGGGAGATGGTCCTGGGCGGCATGCGCATCCACATCA
TCCAACGTCCGAACCGGCGAATGGGCCATGTAGTCTGTCCCCAGACTAGC
GCATGCGATATCTGTCGCGGCGGACTCCCAGGCATCAAAGAGTCGGCGGG
TCTGCTGGCGCTGTCGATGACATGTAAACAGATCTACTGCGAGTCTATCT
ATATGCTCTACTCGCTCAACACCTTTGAATTCAGCAATACCTGGTCGCTG
ACATACCTGCGACCCACCATTCCGGCCGACTTCTGGGACGCCATCCGCGA
GGTCGAACTCCGCTGGGCGTTCCCGGGCCACTGGCTCCCCTGCAAGGACC
CCGTCAAGTCGGTCTACTTCTCCGCTGGCCGGCAGCAGTGGGTGGAGACG
TGTCTGGCTCTCACAGACATGCAGGGCTTGCAGACGTTCACGCTGCAGCT
GAGTGGGAGCTGGTTCTGCGAGCCGGTGGAAAAGATCCCGGTGTTCTTGG
AACCGCTACGGGCGCTGCATCTGCGACAGCGATGGAAGTTGCAGCTGCCG
AGGCAGCCATATTATGTAAAGGAGATTCGGAATATTGATGGGGATTTGAG
AAAGCGGGGGATTGAGTGTGTGGTGAGGGTGGTTTAGATGGCGCGCAGCA
AGCAGGGGGTGTTTTCTTGGGAGGATGTGTTGGCGCATCGCTACCAGAAC
AACAAACCATCCGGGCTCCCCAGGTCACGACGATACAGCGCCGTTCAAGG
CCAACGGACGTCCTCTAAACCCGACACCAGAACGGAATGGACCATCCAAT
CGCAAAGCGCCCTACTGGCCAAGCTATCGCCCGAGCTGCGACTCATGATC
TGGGAGATGGTCCTGGGCGGCATGCGCATCCACATCATCCAACGTCCGAA
CCGGCGAATGGGCCATGTAGTCTGTCCCCAGACTAGCGCATGCGATATCT
GTCGCGGCGGACTCCCAGGCATCAAAGAGTCGGCGGGTCTGCTGGCGCTG
TCGATGACATGTAAACAGATCTACTGCGAGTCTATCTATATGCTCTACTC
GCTCAACACCTTTGAATTCAGCAATACCTGGTCGCTGACATACCTGCGAC
CCACCATTCCGGCCGACTTCTGGGACGCCATCCGCGAGGTCGAACTCCGC
TGGGCGTTCCCGGGCCACTGGCTCCCCTGCAAGGACCCCGTCAAGTCGGT
CTACTTCTCCGCTGGCCGGCAGCAGTGGGTGGAGACGTGTCTGGCTCTCA
CAGACATGCAGGGCTTGCAGACGTTCACGCTGCAGCTGAGTGGGAGCTGG
TTCTGCGAGCCGGTGGAAAAGATCCCGGTGTTCTTGGAACCGCTACGGGC
GCTGCATCTGCGACAGCGATGGAAGTTGCAGCTGCCGAGGCAGCCATATT
ATGTAAAGGAGATTCGGAATATTGATGGGGATTTGAGAAAGCGGGGGATT
GAGTGTGTGGTGAGGGTGGTTTAGATGGCGCGCAGCAAGCAGGGGGTGTT
TTCTTGGGAGGATGTGTTGGCGCATCGCTACCAGAACAACAAACCATCCG
GGCTCCCCAGGTCACGACGATACAGCGCCGTTCAAGGCCAACGGACGTCC
TCTAAACCCGACACCAGAACGGAATGGACCATCCAATCGCAAAGCGCCCT
ACTGGCCAAGCTATCGCCCGAGCTGCGACTCATGATCTGGGAGATGGTCC
TGGGCGGCATGCGCATCCACATCATCCAACGTCCGAACCGGCGAATGGGC
CATGTAGTCTGTCCCCAGACTAGCGCATGCGATATCTGTCGCGGCGGACT
CCCAGGCATCAAAGAGTCGGCGGGTCTGCTGGCGCTGTCGATGACATGTA
AACAGATCTACTGCGAGTCTATCTATATGCTCTACTCGCTCAACACCTTT
GAATTCAGCAATACCTGGTCGCTGACATACCTGCGACCCACCATTCCGGC
CGACTTCTGGGACGCCATCCGCGAGGTCGAACTCCGCTGGGCGTTCCCGG
GCCACTGGCTCCCCTGCAAGGACCCCGTCAAGTCGGTCTACTTCTCCGCT
GGCCGGCAGCAGTGGGTGGAGACGTGTCTGGCTCTCACAGACATGCAGGG
CTTGCAGACGTTCACGCTGCAGCTGAGTGGGAGCTGGTTCTGCGAGCCGG
TGGAAAAGATCCCGGTGTTCTTGGAACCGCTACGGGCGCTGCATCTGCGA
CAGCGATGGAAGTTGCAGCTGCCGAGGCAGCCATATTATGTAAAGGAGAT
TCGGAATATTGATGGGGATTTGAGAAAGCGGGGGATTGAGTGTGTGGTGA
GGGTGGTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005215-T1.utr5p1 | KJC3_005215-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005215-T1.utr3p1 | KJC3_005215-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1945427..1947116 + |
|
