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KJC3_005220-T2, KJC3_005220-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005220-T2
Unique NameKJC3_005220-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1967620..1971239-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005220-T2 ID=KJC3_005220-T2|Name=KJC3_005220-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3620bp|location=Sequence derived from alignment at ch4:1967620..1971239- (Aspergillus niger KJC3)
CTTTGGCTCTCTGTCGCTGGGCCCTCTTTTTCTCTTCCCATTCAACTTTC
CTCGATACGACTTTGTGACTACTCACTCCCTGGCCACCTTCACCGGATCT
ATCCCTTTCTTTTGTGTCCCCACTGGAATCCTCCGTCCCTCCACTGGTCG
TGCTCCGCGGCACCTGATTAATTGACTGATTGATCGATTGATTCCTCTCG
TTGCTCCAAGCAATAAATTAACCTTCTCTACGAACGGCTCCCTCCTCCGA
TCATTACCCCTTCTCGCTTCCTCTTGCTGTGGCGATCTCACACCCTTTCC
ACTGTCAGCATACAATATCATCAAGCTCTTCCCCTGCGCGCAAGAAGAGC
TGTAGTCCTCTCCGTTACTCCCCAGGGGCCCTCATTGAGCTGCCGTGCTC
ACCATGAAGGCCACCCCGTTGCTCATTTCGTGGCACAACGACAATGCCCC
CATCTACTCGGTCCATTTCGACCCCAATGGCAAAGGTCGTCTGGCCACGG
CCGGCAAGTATGATAAACTACTCTTTGTGTTAAGTCCAATTATGGGTCCA
TGGTGTTAATGTTCTTCCTCCCTAGTGATAACAACGTCCGAGTACGAACC
CCCCTCACCAGACCTCCTCCCCCTCCAAACTCCTCCTCACGGCCTTTCTC
TGACACAAGAATACAACCATAGCTATGGAAAGTGGAGACAACTGGCGAAG
AACGAAAAGTGACCTACCTGAGCACACTGATTAAACACACCCAAGCTGTG
AATGTGGTCCGTTTCAGTCCTAAAGGTAGATATCTCCTCGATCCGTATAC
CGAATCTTGTCTCTAACGGCTCGTCTTCGTAATCTTTTCAGGCGAGATGC
TGGCATCTGCCGGAGATGATGGCAATGTGTTACTCTGGGTCCCATCGGAA
TTGCAAACACAATCTGGTCTGGGTGAAGATCGTTCTGACGACAAGGAAAC
ATGGCGTGTAAAGCACATGTGTCGGTCATCTGGTGCAGAGATCTATGATC
TTGCCTGGTCCCCAGATGGCGTGTTCATCATAACAGGAAGCATGGACAAT
ATTGCCCGGATCTATAATGCTCAGACAGGTGAGCATCCTCTTTCAGAATG
CCTCGAGGAATGCCTTTCCGCTTACGATCAAAAATTTAGGTCAAATGGTA
CGCCAGATCGCTGAGCATTCGCATTATGTCCAGGGTGTAGCTTGGGATCC
TCTGAATGAGTTTGTGGCGACGCAATCGTCAGATCGTTCTGTCCACATCT
ACAGCTTGAAAACAAAGGATGGTCAATTCACCCTTACATCCCATGGGAAA
TTCCTCAAGATGGATCTCCCTGCCAAACGCATCTCTTCCAGTAGCCCAGC
TCCGCCGGATCCTTCTATTCGCTCCCAACCCACAGCGCCGAGCTCTGCTG
CTGCTATTGTGTCCCCTGCCCCCTCTACCCCGGGCACACCGATGATCTCG
AATCTGCCCATGGATCCTCCACCGGTGTCTCACAGCCGACGCTCATCCTT
CGGGTCATCTCCCTCGATCCGTCGATCGGCATCCCCAGCGCCATCCTTGC
CATTACCCGCAGTCAAGCCACTGGAAGTACCCTCACCAGGTCTGTTGGGT
GGACTTGGCGTGAAAAATGCCAATATATATGCAAATGAGACATTCACCTC
CTTCTTCCGGCGGTTGACATTTGCCCCCGATGGTAGCTTGCTATTCACGC
CTGCAGGCCAATACAAAACTTCGCATGTGTCTGCTACCGATCCGACAAAG
ACTACAGATGAGATTACGAACACTGTTTACATTTACACTCGTGCAGGCTT
CAACAAGCCTCCCATCTCACACCTTCCGGGCCACAAGAAGCCCTCTGTGG
CAGTGAAATGCTCACCTGTGTTCTACACGCTTCGGCAGGGTCCCCAGCCT
GCCAATCATATCACATTAGATACCTCGTCAACGGAGGAATCTTTCTCTTC
TCTTCCCGAGCCGGTAGTGAGCTCTACGGGGGACAATGCTTCTATGGAAC
CCCCGACCTCGGCGCCGAATGACCAAGCAAAGAATGGCTCGACTCCCAAG
GCCTCGGATCGACTTGTAAGCCAGAGTCCTGCACCTGTTTTCACGTTACC
TTATCGGATCGTGTATGCTGTGGCGACCCAGGATGGGGTCATGGTATATG
ACACCCAGCAACAGACACCAATTTGTGTCGTTAGCAATTTGCACTTTGCC
ACATTCACCGACTTGACATGGTAAGCTCTGTCTCCGACATAGGAACCGAT
TAGCGATGTACTAAACGTATCCAGGTCAAACGACGGATTGACTTTGATGA
TGAGTTCGTCAGACGGGTTCTGTTCGACCCTCGCGTTTTCCCCGGGAGAG
TTGGGCCAACCATATGTGGCTCCGGCATCAGCGGCTCAACAGACCGTTTC
ATCCGCCAATAACACGCCGCTCCCCACGCCTGTCACTGCCAAACCAAGCT
CGGCGGTTCAAACAAATCCGACTCAGGCACCTCCCGCAAGTCCGGCACGG
TCCAACTCTGTCTCTTCGGTTACGACACAGTCTGGTAGCTCGAGGCTCAT
CAACAACCCGACGCCTACGCTTGGGTCTGTGCCGCTAGTGACAGCAACCC
ATTCAGCCCAGCCTCCGACACTCCCGCTCACTACCCCGCCGCAGACCCCC
ATGTCCGCGGCCTCCCAAAGTGGGACAAGCTATGTCAGCAACAGTGTTCT
GGGCAAACGACCCGGTGAGTCTGAGAAGGAGGACGACAAAGATCAGAGCG
CCGCTCCGCAGGCACAACAGCAGAATCAGCAACAGCCGAAGAAGAGACGG
GTTGCACCGACCCTGATATCAGCCAGCACCAATCCGTCCGCTACATTGCG
TGACGAGCCACCTAATGCTGACGTGGGCGGTTAAATCTCGCCTGACAAAG
ACGTACCTTATCTGGTCGCCCAAGTGTAACTATTATTTGCTGTTCCTCGT
CTCTTGCCCCTCACCTCTTTTTGCTTTTATCCGTGTAATGTCAAACGCGG
GCCCGGATGATCTGGTTGCTACGATTATTATTATTATTATTCCCTTGCTG
ATGATTTACGCCTCTTTTCTTTCTTTTCCGTCTTTTTGACTTTGCTTTTT
CCTTCCTCCCGATGGGTCTCGGTTCCTTCCTGGAAATCCCGGTAGAGTTT
TCCCACGCGTTCCGGTCATGCATGCATGCATGCATCTATTTTCCCTCCAT
TCTTCTGGCGCATTTACTGTAACCTTGCAACCTCATCCCCTCATCCCTCT
TACTCTCACCTTTACTTCTTTTGGCTCAACTCACGCGGGGGCTCGGAATT
ACTGTATGTATTTACTCATCCCGCTTTTTCCATAACCACAACCCTATTTT
TCTATCTGTTCTACCTTGGTGTCTTCATGGTTACTGTTCCTTTCCATAGT
CGCGAGTACCCCTTCTCTCTTATTCTGTTCTCTCCCGGTTTGCATCTCTT
ATTTCGCAAAGGCAGGGGTGCATTGTGCATTGACTATTGACTCTGGCCAT
GGCTGCGGGGGAGGTAAGATCCATAGGTAACTAGTTAGCTAGTAGGTAGG
AACCTTGTCTGGTTGTTTTTGGAATAGATCATCAATCAGTCAATCAATCA
ATCCGATCTAGTGTCTTGTG
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Coding sequence (CDS) from alignment at ch4:1967620..1971239-

>KJC3_005220-T2 ID=KJC3_005220-T2|Name=KJC3_005220-T2|organism=Aspergillus niger KJC3|type=CDS|length=5769bp|location=Sequence derived from alignment at ch4:1967620..1971239- (Aspergillus niger KJC3)
GTCAAACGACGGATTGACTTTGATGATGAGTTCGTCAGACGGGTTCTGTT
CGACCCTCGCGTTTTCCCCGGGAGAGTTGGGCCAACCATATGTGGCTCCG
GCATCAGCGGCTCAACAGACCGTTTCATCCGCCAATAACACGCCGCTCCC
CACGCCTGTCACTGCCAAACCAAGCTCGGCGGTTCAAACAAATCCGACTC
AGGCACCTCCCGCAAGTCCGGCACGGTCCAACTCTGTCTCTTCGGTTACG
ACACAGTCTGGTAGCTCGAGGCTCATCAACAACCCGACGCCTACGCTTGG
GTCTGTGCCGCTAGTGACAGCAACCCATTCAGCCCAGCCTCCGACACTCC
CGCTCACTACCCCGCCGCAGACCCCCATGTCCGCGGCCTCCCAAAGTGGG
ACAAGCTATGTCAGCAACAGTGTTCTGGGCAAACGACCCGGTGAGTCTGA
GAAGGAGGACGACAAAGATCAGAGCGCCGCTCCGCAGGCACAACAGCAGA
ATCAGCAACAGCCGAAGAAGAGACGGGTTGCACCGACCCTGATATCAGCC
AGCACCAATCCGTCCGCTACATTGCGTGACGAGCCACCTAATGCTGACGT
GGGCGGTTAAGTCAAATGGTACGCCAGATCGCTGAGCATTCGCATTATGT
CCAGGGTGTAGCTTGGGATCCTCTGAATGAGTTTGTGGCGACGCAATCGT
CAGATCGTTCTGTCCACATCTACAGCTTGAAAACAAAGGATGGTCAATTC
ACCCTTACATCCCATGGGAAATTCCTCAAGATGGATCTCCCTGCCAAACG
CATCTCTTCCAGTAGCCCAGCTCCGCCGGATCCTTCTATTCGCTCCCAAC
CCACAGCGCCGAGCTCTGCTGCTGCTATTGTGTCCCCTGCCCCCTCTACC
CCGGGCACACCGATGATCTCGAATCTGCCCATGGATCCTCCACCGGTGTC
TCACAGCCGACGCTCATCCTTCGGGTCATCTCCCTCGATCCGTCGATCGG
CATCCCCAGCGCCATCCTTGCCATTACCCGCAGTCAAGCCACTGGAAGTA
CCCTCACCAGGTCTGTTGGGTGGACTTGGCGTGAAAAATGCCAATATATA
TGCAAATGAGACATTCACCTCCTTCTTCCGGCGGTTGACATTTGCCCCCG
ATGGTAGCTTGCTATTCACGCCTGCAGGCCAATACAAAACTTCGCATGTG
TCTGCTACCGATCCGACAAAGACTACAGATGAGATTACGAACACTGTTTA
CATTTACACTCGTGCAGGCTTCAACAAGCCTCCCATCTCACACCTTCCGG
GCCACAAGAAGCCCTCTGTGGCAGTGAAATGCTCACCTGTGTTCTACACG
CTTCGGCAGGGTCCCCAGCCTGCCAATCATATCACATTAGATACCTCGTC
AACGGAGGAATCTTTCTCTTCTCTTCCCGAGCCGGTAGTGAGCTCTACGG
GGGACAATGCTTCTATGGAACCCCCGACCTCGGCGCCGAATGACCAAGCA
AAGAATGGCTCGACTCCCAAGGCCTCGGATCGACTTGTAAGCCAGAGTCC
TGCACCTGTTTTCACGTTACCTTATCGGATCGTGTATGCTGTGGCGACCC
AGGATGGGGTCATGGTATATGACACCCAGCAACAGACACCAATTTGTGTC
GTTAGCAATTTGCACTTTGCCACATTCACCGACTTGACATGATGCTGGCA
TCTGCCGGAGATGATGGCAATGTGTTACTCTGGGTCCCATCGGAATTGCA
AACACAATCTGGTCTGGGTGAAGATCGTTCTGACGACAAGGAAACATGGC
GTGTAAAGCACATGTGTCGGTCATCTGGTGCAGAGATCTATGATCTTGCC
TGGTCCCCAGATGGCGTGTTCATCATAACAGGAAGCATGGACAATATTGC
CCGGATCTATAATGCTCAGACAGGTCAAACGACGGATTGACTTTGATGAT
GAGTTCGTCAGACGGGTTCTGTTCGACCCTCGCGTTTTCCCCGGGAGAGT
TGGGCCAACCATATGTGGCTCCGGCATCAGCGGCTCAACAGACCGTTTCA
TCCGCCAATAACACGCCGCTCCCCACGCCTGTCACTGCCAAACCAAGCTC
GGCGGTTCAAACAAATCCGACTCAGGCACCTCCCGCAAGTCCGGCACGGT
CCAACTCTGTCTCTTCGGTTACGACACAGTCTGGTAGCTCGAGGCTCATC
AACAACCCGACGCCTACGCTTGGGTCTGTGCCGCTAGTGACAGCAACCCA
TTCAGCCCAGCCTCCGACACTCCCGCTCACTACCCCGCCGCAGACCCCCA
TGTCCGCGGCCTCCCAAAGTGGGACAAGCTATGTCAGCAACAGTGTTCTG
GGCAAACGACCCGGTGAGTCTGAGAAGGAGGACGACAAAGATCAGAGCGC
CGCTCCGCAGGCACAACAGCAGAATCAGCAACAGCCGAAGAAGAGACGGG
TTGCACCGACCCTGATATCAGCCAGCACCAATCCGTCCGCTACATTGCGT
GACGAGCCACCTAATGCTGACGTGGGCGGTTAAGTCAAATGGTACGCCAG
ATCGCTGAGCATTCGCATTATGTCCAGGGTGTAGCTTGGGATCCTCTGAA
TGAGTTTGTGGCGACGCAATCGTCAGATCGTTCTGTCCACATCTACAGCT
TGAAAACAAAGGATGGTCAATTCACCCTTACATCCCATGGGAAATTCCTC
AAGATGGATCTCCCTGCCAAACGCATCTCTTCCAGTAGCCCAGCTCCGCC
GGATCCTTCTATTCGCTCCCAACCCACAGCGCCGAGCTCTGCTGCTGCTA
TTGTGTCCCCTGCCCCCTCTACCCCGGGCACACCGATGATCTCGAATCTG
CCCATGGATCCTCCACCGGTGTCTCACAGCCGACGCTCATCCTTCGGGTC
ATCTCCCTCGATCCGTCGATCGGCATCCCCAGCGCCATCCTTGCCATTAC
CCGCAGTCAAGCCACTGGAAGTACCCTCACCAGGTCTGTTGGGTGGACTT
GGCGTGAAAAATGCCAATATATATGCAAATGAGACATTCACCTCCTTCTT
CCGGCGGTTGACATTTGCCCCCGATGGTAGCTTGCTATTCACGCCTGCAG
GCCAATACAAAACTTCGCATGTGTCTGCTACCGATCCGACAAAGACTACA
GATGAGATTACGAACACTGTTTACATTTACACTCGTGCAGGCTTCAACAA
GCCTCCCATCTCACACCTTCCGGGCCACAAGAAGCCCTCTGTGGCAGTGA
AATGCTCACCTGTGTTCTACACGCTTCGGCAGGGTCCCCAGCCTGCCAAT
CATATCACATTAGATACCTCGTCAACGGAGGAATCTTTCTCTTCTCTTCC
CGAGCCGGTAGTGAGCTCTACGGGGGACAATGCTTCTATGGAACCCCCGA
CCTCGGCGCCGAATGACCAAGCAAAGAATGGCTCGACTCCCAAGGCCTCG
GATCGACTTGTAAGCCAGAGTCCTGCACCTGTTTTCACGTTACCTTATCG
GATCGTGTATGCTGTGGCGACCCAGGATGGGGTCATGGTATATGACACCC
AGCAACAGACACCAATTTGTGTCGTTAGCAATTTGCACTTTGCCACATTC
ACCGACTTGACATGATGCTGGCATCTGCCGGAGATGATGGCAATGTGTTA
CTCTGGGTCCCATCGGAATTGCAAACACAATCTGGTCTGGGTGAAGATCG
TTCTGACGACAAGGAAACATGGCGTGTAAAGCACATGTGTCGGTCATCTG
GTGCAGAGATCTATGATCTTGCCTGGTCCCCAGATGGCGTGTTCATCATA
ACAGGAAGCATGGACAATATTGCCCGGATCTATAATGCTCAGACAGGTCA
AACGACGGATTGACTTTGATGATGAGTTCGTCAGACGGGTTCTGTTCGAC
CCTCGCGTTTTCCCCGGGAGAGTTGGGCCAACCATATGTGGCTCCGGCAT
CAGCGGCTCAACAGACCGTTTCATCCGCCAATAACACGCCGCTCCCCACG
CCTGTCACTGCCAAACCAAGCTCGGCGGTTCAAACAAATCCGACTCAGGC
ACCTCCCGCAAGTCCGGCACGGTCCAACTCTGTCTCTTCGGTTACGACAC
AGTCTGGTAGCTCGAGGCTCATCAACAACCCGACGCCTACGCTTGGGTCT
GTGCCGCTAGTGACAGCAACCCATTCAGCCCAGCCTCCGACACTCCCGCT
CACTACCCCGCCGCAGACCCCCATGTCCGCGGCCTCCCAAAGTGGGACAA
GCTATGTCAGCAACAGTGTTCTGGGCAAACGACCCGGTGAGTCTGAGAAG
GAGGACGACAAAGATCAGAGCGCCGCTCCGCAGGCACAACAGCAGAATCA
GCAACAGCCGAAGAAGAGACGGGTTGCACCGACCCTGATATCAGCCAGCA
CCAATCCGTCCGCTACATTGCGTGACGAGCCACCTAATGCTGACGTGGGC
GGTTAAGTCAAATGGTACGCCAGATCGCTGAGCATTCGCATTATGTCCAG
GGTGTAGCTTGGGATCCTCTGAATGAGTTTGTGGCGACGCAATCGTCAGA
TCGTTCTGTCCACATCTACAGCTTGAAAACAAAGGATGGTCAATTCACCC
TTACATCCCATGGGAAATTCCTCAAGATGGATCTCCCTGCCAAACGCATC
TCTTCCAGTAGCCCAGCTCCGCCGGATCCTTCTATTCGCTCCCAACCCAC
AGCGCCGAGCTCTGCTGCTGCTATTGTGTCCCCTGCCCCCTCTACCCCGG
GCACACCGATGATCTCGAATCTGCCCATGGATCCTCCACCGGTGTCTCAC
AGCCGACGCTCATCCTTCGGGTCATCTCCCTCGATCCGTCGATCGGCATC
CCCAGCGCCATCCTTGCCATTACCCGCAGTCAAGCCACTGGAAGTACCCT
CACCAGGTCTGTTGGGTGGACTTGGCGTGAAAAATGCCAATATATATGCA
AATGAGACATTCACCTCCTTCTTCCGGCGGTTGACATTTGCCCCCGATGG
TAGCTTGCTATTCACGCCTGCAGGCCAATACAAAACTTCGCATGTGTCTG
CTACCGATCCGACAAAGACTACAGATGAGATTACGAACACTGTTTACATT
TACACTCGTGCAGGCTTCAACAAGCCTCCCATCTCACACCTTCCGGGCCA
CAAGAAGCCCTCTGTGGCAGTGAAATGCTCACCTGTGTTCTACACGCTTC
GGCAGGGTCCCCAGCCTGCCAATCATATCACATTAGATACCTCGTCAACG
GAGGAATCTTTCTCTTCTCTTCCCGAGCCGGTAGTGAGCTCTACGGGGGA
CAATGCTTCTATGGAACCCCCGACCTCGGCGCCGAATGACCAAGCAAAGA
ATGGCTCGACTCCCAAGGCCTCGGATCGACTTGTAAGCCAGAGTCCTGCA
CCTGTTTTCACGTTACCTTATCGGATCGTGTATGCTGTGGCGACCCAGGA
TGGGGTCATGGTATATGACACCCAGCAACAGACACCAATTTGTGTCGTTA
GCAATTTGCACTTTGCCACATTCACCGACTTGACATGATGCTGGCATCTG
CCGGAGATGATGGCAATGTGTTACTCTGGGTCCCATCGGAATTGCAAACA
CAATCTGGTCTGGGTGAAGATCGTTCTGACGACAAGGAAACATGGCGTGT
AAAGCACATGTGTCGGTCATCTGGTGCAGAGATCTATGATCTTGCCTGGT
CCCCAGATGGCGTGTTCATCATAACAGGAAGCATGGACAATATTGCCCGG
ATCTATAATGCTCAGACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005220KJC3_005220Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005220-T2KJC3_005220-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005220-T2.cdsKJC3_005220-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005220-T2.utr3p1KJC3_005220-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005220-T2.exon5KJC3_005220-T2.exon5Aspergillus niger KJC3exon
KJC3_005220-T2.exon4KJC3_005220-T2.exon4Aspergillus niger KJC3exon
KJC3_005220-T2.exon3KJC3_005220-T2.exon3Aspergillus niger KJC3exon
KJC3_005220-T2.exon2KJC3_005220-T2.exon2Aspergillus niger KJC3exon
KJC3_005220-T2.exon1KJC3_005220-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005220-T2.utr5p3KJC3_005220-T2.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_005220-T2.utr5p2KJC3_005220-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_005220-T2.utr5p1KJC3_005220-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019015
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR024977
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
DBxrefPFAM:PF09453
DBxrefPFAM:PF12894
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1967620..1971239 -
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