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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2056706..2057762+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005241-T1 ID=KJC3_005241-T1|Name=KJC3_005241-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1057bp|location=Sequence derived from alignment at ch4:2056706..2057762+ (Aspergillus niger KJC3)
ATGGGTAAAGGCGGTCGCATTGTCTGCATCTTCACTCCATATGTCCTCAC
CATCGCCTCCTTAATATGCATCATCATGGTGGGCCTGGGCTGCACAAAAT
CCAGCTCCAGCACGCTAAATGATCTCTACTTCTTCAGAGTATGTCTTGCT
TACCTTTCACGCATCCCCACTCAAATGTCCGATCGTACTGACTCCACTTC
AGGCCGACCTCAAGAACATTACCTCCGAAGCCTCCTCCACCGCATCAACA
GTATCCTCCGTCGTGAGCGACCTGACCGGTGTTTCGGATGGCGATCTTTC
CGCTGCGCTCGAGGAAATCGAAGAACAATACAACATCGAGGACTTCTATG
CCATTGGTCTCTGGGGCTACTGTGAAGGAAACATCACCTCCAACAACAGC
TATCAAACCAACAACTGCTCCAAGCCCGAGGCCGAGTTCTGGTTCAACCC
TCTGGAGGTCTGGAACTTGGAAGAGAGTGGCCTGGAGAATGCCCTTCCCA
GCAAAGTCAAGAGCTCCCTGAACACCTACAAGGCCGTTTCCAAATGGATG
TTCATCGCCTACATCATTGCATTTGCTCTTACGGTCGCTGAACTGGTCGT
CGGTGTCTTCGCTATCTGCAGTCGCTGGGGTAGCTGCGTGACCAGCTTGG
TGTCTGCTGTAGCCTTCTTCTTCACCGCTGCCGCTTCCGTCACTTCTACC
GCCATGTTCGCCGTCCTCAAGGGCGTCTTCAAATCCGAACTCGAGCAATA
CGGCATTAAGGGCCAAATGGGCAAGAACATCTACGTCGCTACCTGGCTCG
CGGTCGCCTTCTCCCTCGCAGCCACTCTCTTCTGGATCATCAGCTCCTGC
TGCTGCTCCGGTCGCTCCCCTTACAACCACCGCAACCGCAACCGCGCCGT
CATGGCCGAGAAGACCCCCTACACCTATGAGGCTCTGGGTCCCTACGGCC
AGCCCCAGCAGACCCCCTACAACACCTCCTACCCTCCCCCGCCTCCTATC
CACGGCAACCAGACCACGGGTCGGACGAACGCCTATGAACCCTTCCGTCA
CACTTAA back to topCoding sequence (CDS) from alignment at ch4:2056706..2057762+ >KJC3_005241-T1 ID=KJC3_005241-T1|Name=KJC3_005241-T1|organism=Aspergillus niger KJC3|type=CDS|length=1986bp|location=Sequence derived from alignment at ch4:2056706..2057762+ (Aspergillus niger KJC3)
ATGGGTAAAGGCGGTCGCATTGTCTGCATCTTCACTCCATATGTCCTCAC
CATCGCCTCCTTAATATGCATCATCATGGTGGGCCTGGGCTGCACAAAAT
CCAGCTCCAGCACGCTAAATGATCTCTACTTCTTCAGAGCCGACCTCAAG
AACATTACCTCCGAAGCCTCCTCCACCGCATCAACAGTATCCTCCGTCGT
GAGCGACCTGACCGGTGTTTCGGATGGCGATCTTTCCGCTGCGCTCGAGG
AAATCGAAGAACAATACAACATCGAGGACTTCTATGCCATTGGTCTCTGG
GGCTACTGTGAAGGAAACATCACCTCCAACAACAGCTATCAAACCAACAA
CTGCTCCAAGCCCGAGGCCGAGTTCTGGTTCAACCCTCTGGAGGTCTGGA
ACTTGGAAGAGAGTGGCCTGGAGAATGCCCTTCCCAGCAAAGTCAAGAGC
TCCCTGAACACCTACAAGGCCGTTTCCAAATGGATGTTCATCGCCTACAT
CATTGCATTTGCTCTTACGGTCGCTGAACTGGTCGTCGGTGTCTTCGCTA
TCTGCAGTCGCTGGGGTAGCTGCGTGACCAGCTTGGTGTCTGCTGTAGCC
TTCTTCTTCACCGCTGCCGCTTCCGTCACTTCTACCGCCATGTTCGCCGT
CCTCAAGGGCGTCTTCAAATCCGAACTCGAGCAATACGGCATTAAGGGCC
AAATGGGCAAGAACATCTACGTCGCTACCTGGCTCGCGGTCGCCTTCTCC
CTCGCAGCCACTCTCTTCTGGATCATCAGCTCCTGCTGCTGCTCCGGTCG
CTCCCCTTACAACCACCGCAACCGCAACCGCGCCGTCATGGCCGAGAAGA
CCCCCTACACCTATGAGGCTCTGGGTCCCTACGGCCAGCCCCAGCAGACC
CCCTACAACACCTCCTACCCTCCCCCGCCTCCTATCCACGGCAACCAGAC
CACGGGTCGGACGAACGCCTATGAACCCTTCCGTCACACTTAAATGGGTA
AAGGCGGTCGCATTGTCTGCATCTTCACTCCATATGTCCTCACCATCGCC
TCCTTAATATGCATCATCATGGTGGGCCTGGGCTGCACAAAATCCAGCTC
CAGCACGCTAAATGATCTCTACTTCTTCAGAGCCGACCTCAAGAACATTA
CCTCCGAAGCCTCCTCCACCGCATCAACAGTATCCTCCGTCGTGAGCGAC
CTGACCGGTGTTTCGGATGGCGATCTTTCCGCTGCGCTCGAGGAAATCGA
AGAACAATACAACATCGAGGACTTCTATGCCATTGGTCTCTGGGGCTACT
GTGAAGGAAACATCACCTCCAACAACAGCTATCAAACCAACAACTGCTCC
AAGCCCGAGGCCGAGTTCTGGTTCAACCCTCTGGAGGTCTGGAACTTGGA
AGAGAGTGGCCTGGAGAATGCCCTTCCCAGCAAAGTCAAGAGCTCCCTGA
ACACCTACAAGGCCGTTTCCAAATGGATGTTCATCGCCTACATCATTGCA
TTTGCTCTTACGGTCGCTGAACTGGTCGTCGGTGTCTTCGCTATCTGCAG
TCGCTGGGGTAGCTGCGTGACCAGCTTGGTGTCTGCTGTAGCCTTCTTCT
TCACCGCTGCCGCTTCCGTCACTTCTACCGCCATGTTCGCCGTCCTCAAG
GGCGTCTTCAAATCCGAACTCGAGCAATACGGCATTAAGGGCCAAATGGG
CAAGAACATCTACGTCGCTACCTGGCTCGCGGTCGCCTTCTCCCTCGCAG
CCACTCTCTTCTGGATCATCAGCTCCTGCTGCTGCTCCGGTCGCTCCCCT
TACAACCACCGCAACCGCAACCGCGCCGTCATGGCCGAGAAGACCCCCTA
CACCTATGAGGCTCTGGGTCCCTACGGCCAGCCCCAGCAGACCCCCTACA
ACACCTCCTACCCTCCCCCGCCTCCTATCCACGGCAACCAGACCACGGGT
CGGACGAACGCCTATGAACCCTTCCGTCACACTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005886 | plasma membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009571 |
| DBxref | PFAM:PF06687 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2056706..2057762 + |
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