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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2077049..2077976+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005245-T1 ID=KJC3_005245-T1|Name=KJC3_005245-T1|organism=Aspergillus niger KJC3|type=mRNA|length=928bp|location=Sequence derived from alignment at ch4:2077049..2077976+ (Aspergillus niger KJC3)
GCTACCTACCTACCTATCTTTCTTTTTTCTATTCCCACTGACAAGAACTT
CCACGCCCATACCCCTCGCTCTCTCCTATTGATATAGTCCGTTGCTGCAA
AGCAAATACCTATCACATTATCACACACCCAGAAGTTACTCGTCATCATG
GTATGTCACATACCTAACCAAACCTCGTCCGTCCCCGGCCGGGTTGTCCT
GCGGAAGAGACGAGGATATGGGATAGATAGGGTATAGATTATGGGATATA
CTAATATATTCATGTGTGCATTCAGCTCGGACGTCTTAGCCACTACGCAT
TCGATGCGGTTCTTAGTACGTACCCTTATTATTATTTTTCTTCTGTTTAA
GTTGGGGTTTGGAGCTGACCTGTTTCGCAATCTAGTCTCGGCCTTCCTGG
CTGGCGTCAAGCGCTCGACTGGATTAACGTAAATACTACGCCCCATTTCT
TACGCTATTATCCATTCTACCCGAGGGTCAGAAAACTAATCAGTTCATCC
CGCGCTCATCCCCCCGTCTTGGGGGTAATCGCGTGGGGTATTTCACAGCC
CCAGTCTCAACTCCGACAAAATCACCGATAACAAGGACTTCAAGAAGTGG
ATCGACAACTACCTGGGTGTGGGTGAGTGGGTGATGGATCAGTCTGTGGC
TGTGTTGGGTTCGACTAGCTACTTCGAGCGCAAGCGGTAGATCTACTACT
ACTACTACATCTCAACCACCGATCGCATCGCTTTTCCTGTGTCGGAGTCG
CCGGTCGGCTTACGAATGGATTGAATGGATCTCTTGTGGGGTGGGCATCT
ATATGTGATTTGCCTGGGGTGGGCGAATGCACTACAAGGTGAAACTGGGA
GTTTCTGGCTGGAGGAGAGAAGGCGGGATAAGACAAGGAGGATAACAATC
CCGTCGCGGCTGGGGTATTATTCTGGAG back to topCoding sequence (CDS) from alignment at ch4:2077049..2077976+ >KJC3_005245-T1 ID=KJC3_005245-T1|Name=KJC3_005245-T1|organism=Aspergillus niger KJC3|type=CDS|length=912bp|location=Sequence derived from alignment at ch4:2077049..2077976+ (Aspergillus niger KJC3)
ATGCTCGGACGTCTTAGCCACTACGCATTCGATGCGGTTCTTATCTCGGC
CTTCCTGGCTGGCGTCAAGCGCTCGACTGGATTAACCCCCAGTCTCAACT
CCGACAAAATCACCGATAACAAGGACTTCAAGAAGTGGATCGACAACTAC
CTGGGTGTGGGTGAGTGGGTGATGGATCAGTCTGTGGCTGTGTTGGGTTC
GACTAGCTACTTCGAGCGCAAGCGGTAGATGCTCGGACGTCTTAGCCACT
ACGCATTCGATGCGGTTCTTATCTCGGCCTTCCTGGCTGGCGTCAAGCGC
TCGACTGGATTAACCCCCAGTCTCAACTCCGACAAAATCACCGATAACAA
GGACTTCAAGAAGTGGATCGACAACTACCTGGGTGTGGGTGAGTGGGTGA
TGGATCAGTCTGTGGCTGTGTTGGGTTCGACTAGCTACTTCGAGCGCAAG
CGGTAGATGCTCGGACGTCTTAGCCACTACGCATTCGATGCGGTTCTTAT
CTCGGCCTTCCTGGCTGGCGTCAAGCGCTCGACTGGATTAACCCCCAGTC
TCAACTCCGACAAAATCACCGATAACAAGGACTTCAAGAAGTGGATCGAC
AACTACCTGGGTGTGGGTGAGTGGGTGATGGATCAGTCTGTGGCTGTGTT
GGGTTCGACTAGCTACTTCGAGCGCAAGCGGTAGATGCTCGGACGTCTTA
GCCACTACGCATTCGATGCGGTTCTTATCTCGGCCTTCCTGGCTGGCGTC
AAGCGCTCGACTGGATTAACCCCCAGTCTCAACTCCGACAAAATCACCGA
TAACAAGGACTTCAAGAAGTGGATCGACAACTACCTGGGTGTGGGTGAGT
GGGTGATGGATCAGTCTGTGGCTGTGTTGGGTTCGACTAGCTACTTCGAG
CGCAAGCGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005245-T1.utr5p1 | KJC3_005245-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005245-T1.utr3p1 | KJC3_005245-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013726 |
| DBxref | PFAM:PF08520 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2077049..2077976 + |
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