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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2080746..2083537+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005247-T1 ID=KJC3_005247-T1|Name=KJC3_005247-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2792bp|location=Sequence derived from alignment at ch4:2080746..2083537+ (Aspergillus niger KJC3)
TACCTATTCGGGAAAAATCACAATACTCCAGGTCCCGTGGTGATTGCCGT
CAACTGTTGTTCCGAACTACCATCATTATTACTACTGCTCTATATAACTA
TTGGTCTGTTTCACGGCGCAATAGCATCATTATTGTCTTAGCCAAGTGTC
ACAACCATACCTTTCCCATCCCCAGAAAAACAAAGCAGGGGCTGAGATCG
TGCGACATTTGACTCACCCAAGTCAGGTCGATACACAATCGCCATGGACA
CGAGACAGGCGAAACGAAAGAGACAAAACAGCTCTTCATCCGGCCAAAAG
CCTCAAGAGCCTCAAGAGCCTCCCACCCCGGTCTCGATCAGAAGAACTCG
TCGAACCGAGTACTATATTACCTCCGCCACCTCTTGCGAAACCCCTCATC
AGAGTAAAAAGGTTCGCTTCTCAGACCCGGGTCCTGGGCGGCAACATGGT
TCTGCCCACTCAACAGGCCTTACTCCGGCCATGTTGCGGTCTTCCTTCGA
AGAACGGGCAGAAGATGACCCGTTGATTCGGAGCCCAAGCCGTGGCCAAC
GGCGGCGCTCAACCCCTCTTCCGCGGTCTCGCCGCAGTATGGACGCTCCT
GATGCTGCCAGTACAGCCTTCTCAGAGCATGTAGTGCAGTTCACCCCGTT
GCGACAACTTCTAGACGCGCGCACGAAACGAAGAATTCGGCGGATTGGGC
TAAGTGATGAGATCAACCATCTAGAGCGCGAGAAGAGAGAATCCGCCCAG
TACGAGAAGACACTCCAGTCGCTACTACGCGAACGAGATTCGTTGAAGAA
TGAACTGGATTCGGTCAAAAGAAACCAAGACGTATCCAAGAGTCTAGCAA
CCAGCGAAGAAACCACATGGCTATCGCCACAATCCATGATTGAACAGGTA
TTGTCAGAGAATGTCCGATTAAGGGAACAGCTTTCGTTCCCTTCGCCGGG
TGCCACAACAGACCATGATACCATCAGCAATTCCGAGGGAGAAACAATGG
TGATCAATGAGAGTGCATGGGATTGTGATACAATGCTTATATCAAACTCG
CCGGATATTCGGGCCTTAGATGCCCGACTTTCAGTGCCTGATAACATTTC
ACTTCTGAGCCAAGGACATGCGAATACCGATGCGTCGACTCAGGCATCCA
TACCTGACCACAGGCAAGAGGCGGAGATCATTGCGCTTTCAGCTGACCTC
GCAGCTGCCAGGAAGGAGAAACGTGACTTATTTGACGCATGTCGCGCCCG
TGTCGCTTCGTTTGGTGGAACTGCAATTGAAGGTCTCCTTCGTCAGTCCT
CTCCACCGCCGGACTTCCTGGATCAAGTCCTGCCTACCCTGACCCAGACA
CTGCGGCGTGCTTCTGACGCTGCTCAAGCACTGGACAACGTCAAGGAAGA
ATTGTCGGGTCTCGGATTTCCTGGGAATAACGCTGAGGAAATCATCTCCA
CAATGCGTGACCACTTTCGCGCCGCACGCCTCCAACTCGAACGAGCAGTT
CCCGGCGAGACCGCTAATGCTAGCCTCAGTGATGGCAAAGCAACTCTTGG
TGCATTAGTAAAGCGAGTTGAGGTGCTCGTCAAGAGCCTTGGGGACGAGC
AGGAACGACTACAAGGCTCCGTAGGCCGGGAGAACGCAATTAGAGGTCAG
TTCGATACTCTGTTGGCTCGATACGAAGGTGCATCGAAGATTCAAGACCT
GGAAGAGTCTATTGCCTCATCCGCTGGAGACATGCTTCACACACGAATGC
GTATGCAGGAGCTTGAACGCGAAGGAAAGGAACAAGCTGTCAGCATTCAG
CGGCTGAATGCTGCTCTCGACAAATACCACGAGGAAGTCAAAGGACTAGA
GGCCCTGGTTACTGAATTGGAGGATGACAAGGCGAAGAATAACGAGTCAC
ACAAACAGGAAGTGGACGAACTACAGCAAAAGCTGGAAGAGCAGGCCCGT
TCCCTTCGTACTACCGAATCAACCGTTGTGGAGCGGGAAACTCGTATCCG
GGAGTTAGAAGAGGACCTTCAACAGAATCGCACCCGCGTGTGTGACCTCG
CAACCAAGATTGAGTCACTCGAGGCTGAGCGCCAGCAAACGATACAGAGT
TTGGAGCAAGAAGCAAAGGAGGAGCAGCAACGCCTTGAACAAGAAGTGGG
GTCGATGAATGTCCTCGTCTCGGAGCTCAACACGTCACTGGCGGAAGCCA
AGTCAGATATTGACCGACTTCGCCGTAGTAACACTGGCTTGGAGGAGCAG
CTGCGCCAGGAAGTTGAAGCAAGGGACAGTCTGCTGGATAAATGGGCTGC
AGAGCAAGCGCGGTCGTTTGCCTTCATGAAGGAGACCGTCAATAGTGAGC
GACGGAAAGCCAGAGTTCGCACTGCGAACTGGGAGCTGCGTTCGGACGAG
ATCCAGTCATCAGATGGCCTGAATATCGGCAGCGAACCCATCACACCGGT
CAGCATGACAAGATTTGTCGACGTGGAGGCTGGCCGGGGGAAGCATCGTA
AGCGCCTGGATAGCGGGGTAGGAATACTCACCGACGATCTGGAGGATGCA
GATCCTGGTCTCCTGCCAGAGTCGCTGCCTTCTGATCCCGCCGAGTTGTT
GTAGTCTGTCTGGTACACGGGGAACTTTGGCACGTTGTTCGCTGTGCGTG
GAAAAGTCTGCAATATATTTTGGTTAGCTATGCATGTTATTCGGAGAGTC
TACTAGGTCATGTACATCAAGCATTGGACATAAGGAAATGATTTGATAGT
TATCTGTTGTGCTTCTGTAATAGCGAACGAGGCCAGTATTGG back to topCoding sequence (CDS) from alignment at ch4:2080746..2083537+ >KJC3_005247-T1 ID=KJC3_005247-T1|Name=KJC3_005247-T1|organism=Aspergillus niger KJC3|type=CDS|length=2361bp|location=Sequence derived from alignment at ch4:2080746..2083537+ (Aspergillus niger KJC3)
ATGGACACGAGACAGGCGAAACGAAAGAGACAAAACAGCTCTTCATCCGG
CCAAAAGCCTCAAGAGCCTCAAGAGCCTCCCACCCCGGTCTCGATCAGAA
GAACTCGTCGAACCGAGTACTATATTACCTCCGCCACCTCTTGCGAAACC
CCTCATCAGAGTAAAAAGGTTCGCTTCTCAGACCCGGGTCCTGGGCGGCA
ACATGGTTCTGCCCACTCAACAGGCCTTACTCCGGCCATGTTGCGGTCTT
CCTTCGAAGAACGGGCAGAAGATGACCCGTTGATTCGGAGCCCAAGCCGT
GGCCAACGGCGGCGCTCAACCCCTCTTCCGCGGTCTCGCCGCAGTATGGA
CGCTCCTGATGCTGCCAGTACAGCCTTCTCAGAGCATGTAGTGCAGTTCA
CCCCGTTGCGACAACTTCTAGACGCGCGCACGAAACGAAGAATTCGGCGG
ATTGGGCTAAGTGATGAGATCAACCATCTAGAGCGCGAGAAGAGAGAATC
CGCCCAGTACGAGAAGACACTCCAGTCGCTACTACGCGAACGAGATTCGT
TGAAGAATGAACTGGATTCGGTCAAAAGAAACCAAGACGTATCCAAGAGT
CTAGCAACCAGCGAAGAAACCACATGGCTATCGCCACAATCCATGATTGA
ACAGGTATTGTCAGAGAATGTCCGATTAAGGGAACAGCTTTCGTTCCCTT
CGCCGGGTGCCACAACAGACCATGATACCATCAGCAATTCCGAGGGAGAA
ACAATGGTGATCAATGAGAGTGCATGGGATTGTGATACAATGCTTATATC
AAACTCGCCGGATATTCGGGCCTTAGATGCCCGACTTTCAGTGCCTGATA
ACATTTCACTTCTGAGCCAAGGACATGCGAATACCGATGCGTCGACTCAG
GCATCCATACCTGACCACAGGCAAGAGGCGGAGATCATTGCGCTTTCAGC
TGACCTCGCAGCTGCCAGGAAGGAGAAACGTGACTTATTTGACGCATGTC
GCGCCCGTGTCGCTTCGTTTGGTGGAACTGCAATTGAAGGTCTCCTTCGT
CAGTCCTCTCCACCGCCGGACTTCCTGGATCAAGTCCTGCCTACCCTGAC
CCAGACACTGCGGCGTGCTTCTGACGCTGCTCAAGCACTGGACAACGTCA
AGGAAGAATTGTCGGGTCTCGGATTTCCTGGGAATAACGCTGAGGAAATC
ATCTCCACAATGCGTGACCACTTTCGCGCCGCACGCCTCCAACTCGAACG
AGCAGTTCCCGGCGAGACCGCTAATGCTAGCCTCAGTGATGGCAAAGCAA
CTCTTGGTGCATTAGTAAAGCGAGTTGAGGTGCTCGTCAAGAGCCTTGGG
GACGAGCAGGAACGACTACAAGGCTCCGTAGGCCGGGAGAACGCAATTAG
AGGTCAGTTCGATACTCTGTTGGCTCGATACGAAGGTGCATCGAAGATTC
AAGACCTGGAAGAGTCTATTGCCTCATCCGCTGGAGACATGCTTCACACA
CGAATGCGTATGCAGGAGCTTGAACGCGAAGGAAAGGAACAAGCTGTCAG
CATTCAGCGGCTGAATGCTGCTCTCGACAAATACCACGAGGAAGTCAAAG
GACTAGAGGCCCTGGTTACTGAATTGGAGGATGACAAGGCGAAGAATAAC
GAGTCACACAAACAGGAAGTGGACGAACTACAGCAAAAGCTGGAAGAGCA
GGCCCGTTCCCTTCGTACTACCGAATCAACCGTTGTGGAGCGGGAAACTC
GTATCCGGGAGTTAGAAGAGGACCTTCAACAGAATCGCACCCGCGTGTGT
GACCTCGCAACCAAGATTGAGTCACTCGAGGCTGAGCGCCAGCAAACGAT
ACAGAGTTTGGAGCAAGAAGCAAAGGAGGAGCAGCAACGCCTTGAACAAG
AAGTGGGGTCGATGAATGTCCTCGTCTCGGAGCTCAACACGTCACTGGCG
GAAGCCAAGTCAGATATTGACCGACTTCGCCGTAGTAACACTGGCTTGGA
GGAGCAGCTGCGCCAGGAAGTTGAAGCAAGGGACAGTCTGCTGGATAAAT
GGGCTGCAGAGCAAGCGCGGTCGTTTGCCTTCATGAAGGAGACCGTCAAT
AGTGAGCGACGGAAAGCCAGAGTTCGCACTGCGAACTGGGAGCTGCGTTC
GGACGAGATCCAGTCATCAGATGGCCTGAATATCGGCAGCGAACCCATCA
CACCGGTCAGCATGACAAGATTTGTCGACGTGGAGGCTGGCCGGGGGAAG
CATCGTAAGCGCCTGGATAGCGGGGTAGGAATACTCACCGACGATCTGGA
GGATGCAGATCCTGGTCTCCTGCCAGAGTCGCTGCCTTCTGATCCCGCCG
AGTTGTTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005247-T1.utr5p1 | KJC3_005247-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005247-T1.utr3p1 | KJC3_005247-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2080746..2083537 + |
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