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KJC3_005258-T1, KJC3_005258-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005258-T1
Unique NameKJC3_005258-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2111033..2112878-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005258-T1 ID=KJC3_005258-T1|Name=KJC3_005258-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1846bp|location=Sequence derived from alignment at ch4:2111033..2112878- (Aspergillus niger KJC3)
ATGGCATCATTACTCGGCGCAGGCTACGAGTCTAGCGACGATGACTCGGC
CAAGCCCACGCAAGTCCAACCTACGGTGCCCTCAGCGACTACGATCGTCG
CGGCGCCTGAAGTGAACACAGAGGTTTGGTCCCCCAGTTTCTTTTGAAAT
AGCTGCCAAGCATTGATCCCCTATTATCTCTATTTCGGTATGTCTGGTGT
ATCTAACAAACCTACAGGACCAAGCGCATATGCAGATGATGCTCGCTAAC
ACCTCATCCACCGCGTTGACCTACAACGCTACCTACGGTGATCTCTCGCG
GCCGTCTCAAGGCCCCGCCAACCCCTTCAAACCTGCCGGACCAGCGAATG
GTCTCAAGCGCAAGAATGTCCCGACCGGTTTCGCCGAAGAAGCAGCCATC
AGTGAGGCGACCTTCGCCGCGCAACACCGCACCTTCCAGAGTCTAGGCTA
CACGCGCAACCCTGGTCTCCCGGGTCAATTTGTCGGCAATCTTGACAACG
CAGCTCAATTCGGTGGCCGCGATGTCATCCAGATGAAACCCTCCAAGGAG
GCCTCTGCAGCGCTGCGCGCAAAACGGCAGAAGAAGGGCGACCCCAGCAT
CGTGGAAGGTGAAGGTGCCTACCTCGGCCCATGGGCGAAATACCAACGCG
AGGAGGTTTACGAAGAGGAGGCCGCCGAAGAGGACCGCGAACTTGCTAGC
GATGAGGAATACGTTGAGGTCGATGAAGAGGAAGACCTGGCACCATCGGC
CATGCCTGCCATGAGCAAAGAAGCCACCGACTACCAAGACGACACGACCA
AGGTCGAATCCACCGAATTCCACGGCACAGAGCAGTTCGACTACCTGGGC
CGCACGTACATGCACGTTCCTCAAGATCTGGACATCGACCTCCGCAAAGA
CCCCGGCAGCGCCAAGAACTTCATCCCCAAGAAACTCATCCATACCTGGA
AATCGCACACCAAAGCCATCACCTCGCTCCGCTTCTTCCCCCGCTCCGGC
CACCTCCTCCTCTCCTCCGCCGCCGACGGCAAAGCCAAGATTTGGGACGC
CTACCACTCACGCGAACTGCTGCGCACCTTCTCCGGCCACTCCAAGGCCA
TCACGGACACCGACTTCCACCCCAGCGGCACCACCTTCCTCACAGCCTCC
TACGACCGCCAAATCAAGCTCTGGGACACCGAATACGGCAAATGTCTCGG
ACGTTTCAGCACAGGCAAGACCCCCCATGTCATCCGCTTCAACCCCGGCG
CCGAACACTCGCACGAGTTCCTGGCCGGTATGTCCGACAAGAAGATCGTG
CAATTCGACACCCGCTCCGGCGAACTGGTCCAAGAATACGACCATCACTT
GGCAGCCATCAACACCATCACCTTTGTCGACGACAACCGCCGCTTCATCT
CCACCTCCGACGACAAATCCCTCCGCGCCTGGGAATACGGCATCCCCGTA
CCCATCAAATTCATCGCCGAACCATACATGTTCGCCCTCACCCGCGCCAC
CCCCCACCCCAACGGCAAATACGTCGCCTTCCAATCCGGCGATAACCAGA
TCGTCGTGTACGGCGCCACGGACAAATTCCGCCAGAACCGGAAGAAGAGT
TTCCGTGGCCACAACAATGCCGGCTACGCCATTGATATCAAGATCTCCCC
AGATGGACAGTTCATTGCTTCCGGTGATAGTGGCGGCTATGTCTGCTTCT
GGGATTGGAAAACAGGGAAAATGTACCATAAGATCCTGGCTGGTGGGAAA
GAAGGTGGCGCGACTACTTGTCTGGATTGGCATCCCCAGGAAACTAGTAA
GGTTGTTACGGGTGGGTTGGATGGGTTGATTAAATATTGGGATTAG
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Coding sequence (CDS) from alignment at ch4:2111033..2112878-

>KJC3_005258-T1 ID=KJC3_005258-T1|Name=KJC3_005258-T1|organism=Aspergillus niger KJC3|type=CDS|length=3504bp|location=Sequence derived from alignment at ch4:2111033..2112878- (Aspergillus niger KJC3)
GACCAAGCGCATATGCAGATGATGCTCGCTAACACCTCATCCACCGCGTT
GACCTACAACGCTACCTACGGTGATCTCTCGCGGCCGTCTCAAGGCCCCG
CCAACCCCTTCAAACCTGCCGGACCAGCGAATGGTCTCAAGCGCAAGAAT
GTCCCGACCGGTTTCGCCGAAGAAGCAGCCATCAGTGAGGCGACCTTCGC
CGCGCAACACCGCACCTTCCAGAGTCTAGGCTACACGCGCAACCCTGGTC
TCCCGGGTCAATTTGTCGGCAATCTTGACAACGCAGCTCAATTCGGTGGC
CGCGATGTCATCCAGATGAAACCCTCCAAGGAGGCCTCTGCAGCGCTGCG
CGCAAAACGGCAGAAGAAGGGCGACCCCAGCATCGTGGAAGGTGAAGGTG
CCTACCTCGGCCCATGGGCGAAATACCAACGCGAGGAGGTTTACGAAGAG
GAGGCCGCCGAAGAGGACCGCGAACTTGCTAGCGATGAGGAATACGTTGA
GGTCGATGAAGAGGAAGACCTGGCACCATCGGCCATGCCTGCCATGAGCA
AAGAAGCCACCGACTACCAAGACGACACGACCAAGGTCGAATCCACCGAA
TTCCACGGCACAGAGCAGTTCGACTACCTGGGCCGCACGTACATGCACGT
TCCTCAAGATCTGGACATCGACCTCCGCAAAGACCCCGGCAGCGCCAAGA
ACTTCATCCCCAAGAAACTCATCCATACCTGGAAATCGCACACCAAAGCC
ATCACCTCGCTCCGCTTCTTCCCCCGCTCCGGCCACCTCCTCCTCTCCTC
CGCCGCCGACGGCAAAGCCAAGATTTGGGACGCCTACCACTCACGCGAAC
TGCTGCGCACCTTCTCCGGCCACTCCAAGGCCATCACGGACACCGACTTC
CACCCCAGCGGCACCACCTTCCTCACAGCCTCCTACGACCGCCAAATCAA
GCTCTGGGACACCGAATACGGCAAATGTCTCGGACGTTTCAGCACAGGCA
AGACCCCCCATGTCATCCGCTTCAACCCCGGCGCCGAACACTCGCACGAG
TTCCTGGCCGGTATGTCCGACAAGAAGATCGTGCAATTCGACACCCGCTC
CGGCGAACTGGTCCAAGAATACGACCATCACTTGGCAGCCATCAACACCA
TCACCTTTGTCGACGACAACCGCCGCTTCATCTCCACCTCCGACGACAAA
TCCCTCCGCGCCTGGGAATACGGCATCCCCGTACCCATCAAATTCATCGC
CGAACCATACATGTTCGCCCTCACCCGCGCCACCCCCCACCCCAACGGCA
AATACGTCGCCTTCCAATCCGGCGATAACCAGATCGTCGTGTACGGCGCC
ACGGACAAATTCCGCCAGAACCGGAAGAAGAGTTTCCGTGGCCACAACAA
TGCCGGCTACGCCATTGATATCAAGATCTCCCCAGATGGACAGTTCATTG
CTTCCGGTGATAGTGGCGGCTATGTCTGCTTCTGGGATTGGAAAACAGGG
AAAATGTACCATAAGATCCTGGCTGGTGGGAAAGAAGGTGGCGCGACTAC
TTGTCTGGATTGGCATCCCCAGGAAACTAGTAAGGTTGTTACGGGTGGGT
TGGATGGGTTGATTAAATATTGGGATTAGATGGCATCATTACTCGGCGCA
GGCTACGAGTCTAGCGACGATGACTCGGCCAAGCCCACGCAAGTCCAACC
TACGGTGCCCTCAGCGACTACGATCGTCGCGGCGCCTGAAGTGAACACAG
AGGACCAAGCGCATATGCAGATGATGCTCGCTAACACCTCATCCACCGCG
TTGACCTACAACGCTACCTACGGTGATCTCTCGCGGCCGTCTCAAGGCCC
CGCCAACCCCTTCAAACCTGCCGGACCAGCGAATGGTCTCAAGCGCAAGA
ATGTCCCGACCGGTTTCGCCGAAGAAGCAGCCATCAGTGAGGCGACCTTC
GCCGCGCAACACCGCACCTTCCAGAGTCTAGGCTACACGCGCAACCCTGG
TCTCCCGGGTCAATTTGTCGGCAATCTTGACAACGCAGCTCAATTCGGTG
GCCGCGATGTCATCCAGATGAAACCCTCCAAGGAGGCCTCTGCAGCGCTG
CGCGCAAAACGGCAGAAGAAGGGCGACCCCAGCATCGTGGAAGGTGAAGG
TGCCTACCTCGGCCCATGGGCGAAATACCAACGCGAGGAGGTTTACGAAG
AGGAGGCCGCCGAAGAGGACCGCGAACTTGCTAGCGATGAGGAATACGTT
GAGGTCGATGAAGAGGAAGACCTGGCACCATCGGCCATGCCTGCCATGAG
CAAAGAAGCCACCGACTACCAAGACGACACGACCAAGGTCGAATCCACCG
AATTCCACGGCACAGAGCAGTTCGACTACCTGGGCCGCACGTACATGCAC
GTTCCTCAAGATCTGGACATCGACCTCCGCAAAGACCCCGGCAGCGCCAA
GAACTTCATCCCCAAGAAACTCATCCATACCTGGAAATCGCACACCAAAG
CCATCACCTCGCTCCGCTTCTTCCCCCGCTCCGGCCACCTCCTCCTCTCC
TCCGCCGCCGACGGCAAAGCCAAGATTTGGGACGCCTACCACTCACGCGA
ACTGCTGCGCACCTTCTCCGGCCACTCCAAGGCCATCACGGACACCGACT
TCCACCCCAGCGGCACCACCTTCCTCACAGCCTCCTACGACCGCCAAATC
AAGCTCTGGGACACCGAATACGGCAAATGTCTCGGACGTTTCAGCACAGG
CAAGACCCCCCATGTCATCCGCTTCAACCCCGGCGCCGAACACTCGCACG
AGTTCCTGGCCGGTATGTCCGACAAGAAGATCGTGCAATTCGACACCCGC
TCCGGCGAACTGGTCCAAGAATACGACCATCACTTGGCAGCCATCAACAC
CATCACCTTTGTCGACGACAACCGCCGCTTCATCTCCACCTCCGACGACA
AATCCCTCCGCGCCTGGGAATACGGCATCCCCGTACCCATCAAATTCATC
GCCGAACCATACATGTTCGCCCTCACCCGCGCCACCCCCCACCCCAACGG
CAAATACGTCGCCTTCCAATCCGGCGATAACCAGATCGTCGTGTACGGCG
CCACGGACAAATTCCGCCAGAACCGGAAGAAGAGTTTCCGTGGCCACAAC
AATGCCGGCTACGCCATTGATATCAAGATCTCCCCAGATGGACAGTTCAT
TGCTTCCGGTGATAGTGGCGGCTATGTCTGCTTCTGGGATTGGAAAACAG
GGAAAATGTACCATAAGATCCTGGCTGGTGGGAAAGAAGGTGGCGCGACT
ACTTGTCTGGATTGGCATCCCCAGGAAACTAGTAAGGTTGTTACGGGTGG
GTTGGATGGGTTGATTAAATATTGGGATTAGATGGCATCATTACTCGGCG
CAGGCTACGAGTCTAGCGACGATGACTCGGCCAAGCCCACGCAAGTCCAA
CCTACGGTGCCCTCAGCGACTACGATCGTCGCGGCGCCTGAAGTGAACAC
AGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005258KJC3_005258Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005258-T1KJC3_005258-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005258-T1.cdsKJC3_005258-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005258-T1.exon2KJC3_005258-T1.exon2Aspergillus niger KJC3exon
KJC3_005258-T1.exon1KJC3_005258-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteBUSCO:EOG09262A6N
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2111033..2112878 -
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