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KJC3_005264-T1, KJC3_005264-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005264-T1
Unique NameKJC3_005264-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2128224..2129978+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005264-T1 ID=KJC3_005264-T1|Name=KJC3_005264-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1755bp|location=Sequence derived from alignment at ch4:2128224..2129978+ (Aspergillus niger KJC3)
CCTGCTTCAGTTCTTTAGCTTCTACCCATCCGAGGGCCATCATGGAGTGG
CCGACCAGTTCTTTCCCAACACCCCAAGAGGATACGACTCATCCAGACCG
CCTCCCCATCGGTCAATTCATCTTACCCCGGTCATCAGCTGTTTCGGGGT
CCCAGCTAGTCTCCTCCGTCCTTGCAAATTACCCCTATGGGGCCTTTACC
TCCGTTGCGGCTGGACTTCCCCGTAGTATTGAGCCTCATGTTTGGACAGT
CAATCCGACGGAGAGTCTTTCTAGTGACGGAAACATTCCACCGCAAAACG
GCGTGGCGCAGACTGCACAAGCGCCGTTTGCCTATCACGAGATCCCTGCC
GAGTCTCTTGATTTGTTGTATGCTTCCACTAGTAGTGGTCAGCCCCGACG
AGACTGGACGGATACCAATGCAGACACGGACCCAACCTGGGTTGCCCCCA
TTAGCGCCACGAGCCAACTGCCACACCCAGCTTCTGAAAGGTATGTCGCC
TGCTCCATCTGGTATCCCTGGGTGACCTTACCAACATGGCACACTAACGG
ACAAATATCTCCGGAGTAGTATCCCTCCTACTCCATGTAGTGATCATAGC
CCACCGACCTTTGAGTGCAAATGGCGAGGCTGTTCCAGCTCCACCCGTTT
CAGCACTGAAGGAGACCTTGTTCGCCATCTGAAAACAATCCACATCTCCC
CTGATGCGTATTCCTGTTCAGTCTGTGGAAAAACCTCTGGTAGGAAGGAT
CACCTCCGTGACCATCGGAGACGTCGTCATCGTGGCTTGGCCTGAGACTC
TGCTTTACATTCGTGTTTCATGTTTAAGTTTCCTGCCATATTCTCCTACC
ATTGCCCCGTTTCGGCTTTTTCTTATTTATCTATCTATATATACTTATTT
GGGGCCTTATTGGCTACTTTTTTCATTTCATGTCTCTCTTACTTGATATA
TCCATTATGGAGAGAACAATATAATAGAAAATTTTCCGATTTATATCGTC
CGCACAGTTCTGATAAACAATGTCGAGGAGGTGCGGCCAATCTCGCGGGC
GTTATTCTCCCACTTTGAACTTGGATTTGTTACTTTGAATCAATATCGAG
TTCCCATACACTCCCGCATTTCACCAGCCGGTCGCAGACGATCGGCCAGG
ATACCTCACACGTCGTCCACTTGACTGTACTCAAGTCAACGACCAGAAAG
GCGTCAAAAATTCAAGTAATTCAGCAAGAAAGACGTCTACTTGATATCAA
CATATCAACTTAAGAAAGAAGAAAGAGAGAGTGTGTGCGTGTGTGCAGGA
AACAAGCCGACGAAACTGATTGTGTCTGATCGGAAGGCCAGGCAGGCAAT
AATGTTAGATGTCAAGCCCAAACAGGCAAAAATCAACGCGAAGGGGCTCA
TACGTCTTCCGTTTACACTATCTATTCAACAAGTTTACCATACCATTGAA
AGTCATTAAATATAGGGGAAAGTTGAACAACGATGCTGCGGGTGCCGGAC
TATGGGACATGGGAATGAACCAGAAGGTGGGGTACCCATGGATTATGTCC
ACCTGCTGCGGTCTTCAAGCGAGGTGCAGGGGGCTGCTGGTACGAGGCAG
TTTGTACTGGCAGTCTAATCTTGGCAAGAATCATCGGACAGCCAGCCGCG
TCTGACACCTATCAAGTGGTTTGGGCAGTTAAGTTTACGGAGAATCTGAT
TATCCTAACGCAAACCCTTTGCGATCGATACATTTATTACATGATTATAT
TAGGG
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Coding sequence (CDS) from alignment at ch4:2128224..2129978+

>KJC3_005264-T1 ID=KJC3_005264-T1|Name=KJC3_005264-T1|organism=Aspergillus niger KJC3|type=CDS|length=1350bp|location=Sequence derived from alignment at ch4:2128224..2129978+ (Aspergillus niger KJC3)
ATGGAGTGGCCGACCAGTTCTTTCCCAACACCCCAAGAGGATACGACTCA
TCCAGACCGCCTCCCCATCGGTCAATTCATCTTACCCCGGTCATCAGCTG
TTTCGGGGTCCCAGCTAGTCTCCTCCGTCCTTGCAAATTACCCCTATGGG
GCCTTTACCTCCGTTGCGGCTGGACTTCCCCGTAGTATTGAGCCTCATGT
TTGGACAGTCAATCCGACGGAGAGTCTTTCTAGTGACGGAAACATTCCAC
CGCAAAACGGCGTGGCGCAGACTGCACAAGCGCCGTTTGCCTATCACGAG
ATCCCTGCCGAGTCTCTTGATTTGTTGTATGCTTCCACTAGTAGTGGTCA
GCCCCGACGAGACTGGACGGATACCAATGCAGACACGGACCCAACCTGGG
TTGCCCCCATTAGCGCCACGAGCCAACTGCCACACCCAGCTTCTGAAAGT
ATCCCTCCTACTCCATGTAGTGATCATAGCCCACCGACCTTTGAGTGCAA
ATGGCGAGGCTGTTCCAGCTCCACCCGTTTCAGCACTGAAGGAGACCTTG
TTCGCCATCTGAAAACAATCCACATCTCCCCTGATGCGTATTCCTGTTCA
GTCTGTGGAAAAACCTCTGGTAGGAAGGATCACCTCCGTGACCATCGGAG
ACGTCGTCATCGTGGCTTGGCCTGAATGGAGTGGCCGACCAGTTCTTTCC
CAACACCCCAAGAGGATACGACTCATCCAGACCGCCTCCCCATCGGTCAA
TTCATCTTACCCCGGTCATCAGCTGTTTCGGGGTCCCAGCTAGTCTCCTC
CGTCCTTGCAAATTACCCCTATGGGGCCTTTACCTCCGTTGCGGCTGGAC
TTCCCCGTAGTATTGAGCCTCATGTTTGGACAGTCAATCCGACGGAGAGT
CTTTCTAGTGACGGAAACATTCCACCGCAAAACGGCGTGGCGCAGACTGC
ACAAGCGCCGTTTGCCTATCACGAGATCCCTGCCGAGTCTCTTGATTTGT
TGTATGCTTCCACTAGTAGTGGTCAGCCCCGACGAGACTGGACGGATACC
AATGCAGACACGGACCCAACCTGGGTTGCCCCCATTAGCGCCACGAGCCA
ACTGCCACACCCAGCTTCTGAAAGTATCCCTCCTACTCCATGTAGTGATC
ATAGCCCACCGACCTTTGAGTGCAAATGGCGAGGCTGTTCCAGCTCCACC
CGTTTCAGCACTGAAGGAGACCTTGTTCGCCATCTGAAAACAATCCACAT
CTCCCCTGATGCGTATTCCTGTTCAGTCTGTGGAAAAACCTCTGGTAGGA
AGGATCACCTCCGTGACCATCGGAGACGTCGTCATCGTGGCTTGGCCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005264KJC3_005264Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005264-T1.utr5p1KJC3_005264-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005264-T1.exon1KJC3_005264-T1.exon1Aspergillus niger KJC3exon
KJC3_005264-T1.exon2KJC3_005264-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005264-T1.cdsKJC3_005264-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005264-T1.utr3p1KJC3_005264-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005264-T1KJC3_005264-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2128224..2129978 +
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