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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2158758..2160280+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005276-T1 ID=KJC3_005276-T1|Name=KJC3_005276-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1523bp|location=Sequence derived from alignment at ch4:2158758..2160280+ (Aspergillus niger KJC3)
CATAGATTCGCCCTCGTGCAATTGCTCATTCTTCGCAATGTTCGACACCG
TTTGCACCCTTCCGCTATCAGCGGACCTGTTCTCCCAGGCCCTGCATCCC
AAGGAGCCCGTCGTGTCCGTTGGTCTCTCCTCCGGGCATGTCCAGACGTT
CCGACTCCCCACCGACGAAGCGGCCAGCGACGACGACGAGACATCAAATG
CCTCGTCACGCAATGGCAGAGGACACATTGATACGATGTGGCGGACGAGA
CGCCATAAGGGTAGCTGCCGGTGCTTGACGTTTGGAATTGATGGCGAGAC
GCTCTATTCGGCCGGCACGGACGGGCTGATCAAGGCCGCAAAGGCGGAGA
CGGGAGTCGTGGAAAACAAGATCGCTATTCCTACAGAAAAGAATGGGTAG
GAGATAAGCCCCTTTTATATGTGCTTGAAGGGAGGAGAGGACTCAATGGC
TCATTGTATTCGCTTTTAGATCCATCGATGCTCCCACCATCATTCATGCG
CTTTCCCCTCAGACCCTCCTTCTTGCGACCGATTCCAGCGCCCTCCACCT
CTACGATCTCCGCATACCCTACTCCAAGGTTTCCGCGAAGCCTGAACAAT
CTCATCACCCTCACGACGACTACGTTTCGTCGCTTACGCCTCTTCCGGCC
TCTGATACTAGCACCTCGGGGTTCAGCAAGCAATGGGTGACGACGGGTGG
GACGACCCTGGCAGTTACAGATTTGCGACGGGGTGTGCTTGTTCGCAGCG
AGGATCAGGAAGAGGAGTTGATCAGTTCGACGTACATTGGCGGATTGGCG
GCCAGTGGCACGAGTCGCGGCGAGAAGGTGCTTGTGGGGGGTTCTGGCGG
TGTCCTTACGCTTTGGGAGAAGGGCGCGTGGGATGACCAGGACGAGCGGA
TCTATGTGGAGCGTGGAGGAGGTGGTGGAGAGTCCCTGGAGACCATGGCT
GTTCTGCCGGATGAATTGGGTAAGGGCAAGGTGGTCGCTGTTGGTCTGGG
CAATGGTCGGGTCAAGTTTGTGCGGATCGGCGCTAACAAGGTTGCCGCGG
AGGTTATGCATGATGAGACTGAGGGCGTGATTGGCCTGGGCTTTGACGTT
GAGGGGCGCATGGTTACTGGTGGTGGACAGGTGGTGAAGGTTTGGCATGA
GGCTGTTGTTGGCGCTGATAGGTACGGGGCGATGCCGGGGGAGAAGCGCA
TGTACGGAGACAGTGACGATAGCGATGAAGGTGACGACAGTGATGATGAC
TCGGATGATAGCGATGCCGGTGGCCGCCAGGACAAGCCGCAGAACAAGCG
CAAGAAGACAAAAGCCAAGGGCAAGGGTGGGCAGCAAATTATGGCTTTCC
ATGACTTGGATTAAATGGAATCGAGTGTGGTTTATTGATACCCTAAGCGG
GAGGTTGTTATGCATAGCATTGGTGTCGGGAAAATAAAAACAGGGAGTGT
GCTTTGCAGATACGTACTCAATGATGCTAATATCTTATCTCTAGATAATT
GAGCTTCAGCCATATTGTGACCC back to topCoding sequence (CDS) from alignment at ch4:2158758..2160280+ >KJC3_005276-T1 ID=KJC3_005276-T1|Name=KJC3_005276-T1|organism=Aspergillus niger KJC3|type=CDS|length=2508bp|location=Sequence derived from alignment at ch4:2158758..2160280+ (Aspergillus niger KJC3)
ATGTTCGACACCGTTTGCACCCTTCCGCTATCAGCGGACCTGTTCTCCCA
GGCCCTGCATCCCAAGGAGCCCGTCGTGTCCGTTGGTCTCTCCTCCGGGC
ATGTCCAGACGTTCCGACTCCCCACCGACGAAGCGGCCAGCGACGACGAC
GAGACATCAAATGCCTCGTCACGCAATGGCAGAGGACACATTGATACGAT
GTGGCGGACGAGACGCCATAAGGGTAGCTGCCGGTGCTTGACGTTTGGAA
TTGATGGCGAGACGCTCTATTCGGCCGGCACGGACGGGCTGATCAAGGCC
GCAAAGGCGGAGACGGGAGTCGTGGAAAACAAGATCGCTATTCCTACAGA
AAAGAATGGATCCATCGATGCTCCCACCATCATTCATGCGCTTTCCCCTC
AGACCCTCCTTCTTGCGACCGATTCCAGCGCCCTCCACCTCTACGATCTC
CGCATACCCTACTCCAAGGTTTCCGCGAAGCCTGAACAATCTCATCACCC
TCACGACGACTACGTTTCGTCGCTTACGCCTCTTCCGGCCTCTGATACTA
GCACCTCGGGGTTCAGCAAGCAATGGGTGACGACGGGTGGGACGACCCTG
GCAGTTACAGATTTGCGACGGGGTGTGCTTGTTCGCAGCGAGGATCAGGA
AGAGGAGTTGATCAGTTCGACGTACATTGGCGGATTGGCGGCCAGTGGCA
CGAGTCGCGGCGAGAAGGTGCTTGTGGGGGGTTCTGGCGGTGTCCTTACG
CTTTGGGAGAAGGGCGCGTGGGATGACCAGGACGAGCGGATCTATGTGGA
GCGTGGAGGAGGTGGTGGAGAGTCCCTGGAGACCATGGCTGTTCTGCCGG
ATGAATTGGGTAAGGGCAAGGTGGTCGCTGTTGGTCTGGGCAATGGTCGG
GTCAAGTTTGTGCGGATCGGCGCTAACAAGGTTGCCGCGGAGGTTATGCA
TGATGAGACTGAGGGCGTGATTGGCCTGGGCTTTGACGTTGAGGGGCGCA
TGGTTACTGGTGGTGGACAGGTGGTGAAGGTTTGGCATGAGGCTGTTGTT
GGCGCTGATAGGTACGGGGCGATGCCGGGGGAGAAGCGCATGTACGGAGA
CAGTGACGATAGCGATGAAGGTGACGACAGTGATGATGACTCGGATGATA
GCGATGCCGGTGGCCGCCAGGACAAGCCGCAGAACAAGCGCAAGAAGACA
AAAGCCAAGGGCAAGGGTGGGCAGCAAATTATGGCTTTCCATGACTTGGA
TTAAATGTTCGACACCGTTTGCACCCTTCCGCTATCAGCGGACCTGTTCT
CCCAGGCCCTGCATCCCAAGGAGCCCGTCGTGTCCGTTGGTCTCTCCTCC
GGGCATGTCCAGACGTTCCGACTCCCCACCGACGAAGCGGCCAGCGACGA
CGACGAGACATCAAATGCCTCGTCACGCAATGGCAGAGGACACATTGATA
CGATGTGGCGGACGAGACGCCATAAGGGTAGCTGCCGGTGCTTGACGTTT
GGAATTGATGGCGAGACGCTCTATTCGGCCGGCACGGACGGGCTGATCAA
GGCCGCAAAGGCGGAGACGGGAGTCGTGGAAAACAAGATCGCTATTCCTA
CAGAAAAGAATGGATCCATCGATGCTCCCACCATCATTCATGCGCTTTCC
CCTCAGACCCTCCTTCTTGCGACCGATTCCAGCGCCCTCCACCTCTACGA
TCTCCGCATACCCTACTCCAAGGTTTCCGCGAAGCCTGAACAATCTCATC
ACCCTCACGACGACTACGTTTCGTCGCTTACGCCTCTTCCGGCCTCTGAT
ACTAGCACCTCGGGGTTCAGCAAGCAATGGGTGACGACGGGTGGGACGAC
CCTGGCAGTTACAGATTTGCGACGGGGTGTGCTTGTTCGCAGCGAGGATC
AGGAAGAGGAGTTGATCAGTTCGACGTACATTGGCGGATTGGCGGCCAGT
GGCACGAGTCGCGGCGAGAAGGTGCTTGTGGGGGGTTCTGGCGGTGTCCT
TACGCTTTGGGAGAAGGGCGCGTGGGATGACCAGGACGAGCGGATCTATG
TGGAGCGTGGAGGAGGTGGTGGAGAGTCCCTGGAGACCATGGCTGTTCTG
CCGGATGAATTGGGTAAGGGCAAGGTGGTCGCTGTTGGTCTGGGCAATGG
TCGGGTCAAGTTTGTGCGGATCGGCGCTAACAAGGTTGCCGCGGAGGTTA
TGCATGATGAGACTGAGGGCGTGATTGGCCTGGGCTTTGACGTTGAGGGG
CGCATGGTTACTGGTGGTGGACAGGTGGTGAAGGTTTGGCATGAGGCTGT
TGTTGGCGCTGATAGGTACGGGGCGATGCCGGGGGAGAAGCGCATGTACG
GAGACAGTGACGATAGCGATGAAGGTGACGACAGTGATGATGACTCGGAT
GATAGCGATGCCGGTGGCCGCCAGGACAAGCCGCAGAACAAGCGCAAGAA
GACAAAAGCCAAGGGCAAGGGTGGGCAGCAAATTATGGCTTTCCATGACT
TGGATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005276-T1.utr5p1 | KJC3_005276-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005276-T1.utr3p1 | KJC3_005276-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR015943 |
| Product | WD repeat-containing protein jip5 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2158758..2160280 + |
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