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KJC3_005277-T1, KJC3_005277-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005277-T1
Unique NameKJC3_005277-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2160506..2161770+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005277-T1 ID=KJC3_005277-T1|Name=KJC3_005277-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1265bp|location=Sequence derived from alignment at ch4:2160506..2161770+ (Aspergillus niger KJC3)
CGCCAACTAGCAGATAACCCATCTCACTTAAGACAAGCTATCTCCCCATA
CTCTTCCATTGTCATCATCATCATACATCCCTCCACCGCAATGCCAGGGA
CCATCCTCCTCACCGGAGCCAACAGCTCCCTCGCCATCCCAGCAGTCCAC
CACTTCCTCACCAAATACCCAGACTACACTCTCGTCCTTACCGTTCGCAA
CCCCTCCACTTCCGACCCCAACACCAAGCGTCTCAACGACACCATCACGC
CCTTCTCCAGTCCAAGTACCTCAATCCGAAAACTAGACCTCTCCAACCTC
TCCGAAGTATCGACCTTCGCGCAGACCCTAGCAACTGAAATATCCAATGG
CACACTTCCTCCATTAGCAAGCATCATCTGCAATGCATACTACTGGAACC
TCGCCAGCGAAGTCGAAACAACCCCCGACGAACTGGACAAGACCTTCCAG
GTAAACCATATCGCTCACGCCTCGTTAGTGCTACGTCTGCTAGGCTCATT
TGGGCCTGATTCTGGCCGGGTTGTTCTCTTCGGCAGTGATGCCCATTGGC
CCGGTAAGAATGGGTTGGAGAAGTATCCGCCTACCATTCCAGAGGATCTG
GAGGTGCTGGTGAAACCGACTAAGAAGGCGGGTGAGGATGTTAGGGGGAA
GGGGTTCTATCAGTATGCAGTGTCGAAGCTGGCGATTATTATGTGGATGT
ATGCGTTGAATGGGCAGTTGATCAAGGTATAATATCTTCCCCACTTTGCT
TTGCTTTGAGTAAGTAGTAGACTTTGGTGGTTGTACTGACATTGGGATTA
ACTTCAGGACGACAACCTAAAGCACATCAAGGCTGTAGCTATCAATCCAG
GCAACCTGAGTGATTCTCGCGCTCTCCGCACCAACACGCCTCTGATACTT
AGGATCATCTCCCGCCTCATTATCCAGCCGCTCCGGCCGCTGCTGAGACT
ACTTGACCCGACTATGCGCACGGCTACGGAGGCCGGGGAGGATGTGGTCG
AGTTGGCTGTGGGTGAGAAATATGCGGGGGAGGCGGGGTACTTCACCCTT
TTGAAGAAGGATGAGAGTTCGCCTGAGAGTCAGGATGGAGAGAAGCAGGG
GAAGATCTGGAAGAAGACGTTGGAGTGGGCGCAGGTTAGCCCTAAGGATA
CGGTGTTGAAGCTTGAGTAGAGGGCATTTACTTACCGGTGCAAGACAACT
ATAACACTGTGCTATAACTATTACAATAATATCCTAATCAAGATCTTTTC
CTCAAAGAATCAAAC
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Coding sequence (CDS) from alignment at ch4:2160506..2161770+

>KJC3_005277-T1 ID=KJC3_005277-T1|Name=KJC3_005277-T1|organism=Aspergillus niger KJC3|type=CDS|length=1998bp|location=Sequence derived from alignment at ch4:2160506..2161770+ (Aspergillus niger KJC3)
ATGCCAGGGACCATCCTCCTCACCGGAGCCAACAGCTCCCTCGCCATCCC
AGCAGTCCACCACTTCCTCACCAAATACCCAGACTACACTCTCGTCCTTA
CCGTTCGCAACCCCTCCACTTCCGACCCCAACACCAAGCGTCTCAACGAC
ACCATCACGCCCTTCTCCAGTCCAAGTACCTCAATCCGAAAACTAGACCT
CTCCAACCTCTCCGAAGTATCGACCTTCGCGCAGACCCTAGCAACTGAAA
TATCCAATGGCACACTTCCTCCATTAGCAAGCATCATCTGCAATGCATAC
TACTGGAACCTCGCCAGCGAAGTCGAAACAACCCCCGACGAACTGGACAA
GACCTTCCAGGTAAACCATATCGCTCACGCCTCGTTAGTGCTACGTCTGC
TAGGCTCATTTGGGCCTGATTCTGGCCGGGTTGTTCTCTTCGGCAGTGAT
GCCCATTGGCCCGGTAAGAATGGGTTGGAGAAGTATCCGCCTACCATTCC
AGAGGATCTGGAGGTGCTGGTGAAACCGACTAAGAAGGCGGGTGAGGATG
TTAGGGGGAAGGGGTTCTATCAGTATGCAGTGTCGAAGCTGGCGATTATT
ATGTGGATGTATGCGTTGAATGGGCAGTTGATCAAGGACGACAACCTAAA
GCACATCAAGGCTGTAGCTATCAATCCAGGCAACCTGAGTGATTCTCGCG
CTCTCCGCACCAACACGCCTCTGATACTTAGGATCATCTCCCGCCTCATT
ATCCAGCCGCTCCGGCCGCTGCTGAGACTACTTGACCCGACTATGCGCAC
GGCTACGGAGGCCGGGGAGGATGTGGTCGAGTTGGCTGTGGGTGAGAAAT
ATGCGGGGGAGGCGGGGTACTTCACCCTTTTGAAGAAGGATGAGAGTTCG
CCTGAGAGTCAGGATGGAGAGAAGCAGGGGAAGATCTGGAAGAAGACGTT
GGAGTGGGCGCAGGTTAGCCCTAAGGATACGGTGTTGAAGCTTGAGTAGA
TGCCAGGGACCATCCTCCTCACCGGAGCCAACAGCTCCCTCGCCATCCCA
GCAGTCCACCACTTCCTCACCAAATACCCAGACTACACTCTCGTCCTTAC
CGTTCGCAACCCCTCCACTTCCGACCCCAACACCAAGCGTCTCAACGACA
CCATCACGCCCTTCTCCAGTCCAAGTACCTCAATCCGAAAACTAGACCTC
TCCAACCTCTCCGAAGTATCGACCTTCGCGCAGACCCTAGCAACTGAAAT
ATCCAATGGCACACTTCCTCCATTAGCAAGCATCATCTGCAATGCATACT
ACTGGAACCTCGCCAGCGAAGTCGAAACAACCCCCGACGAACTGGACAAG
ACCTTCCAGGTAAACCATATCGCTCACGCCTCGTTAGTGCTACGTCTGCT
AGGCTCATTTGGGCCTGATTCTGGCCGGGTTGTTCTCTTCGGCAGTGATG
CCCATTGGCCCGGTAAGAATGGGTTGGAGAAGTATCCGCCTACCATTCCA
GAGGATCTGGAGGTGCTGGTGAAACCGACTAAGAAGGCGGGTGAGGATGT
TAGGGGGAAGGGGTTCTATCAGTATGCAGTGTCGAAGCTGGCGATTATTA
TGTGGATGTATGCGTTGAATGGGCAGTTGATCAAGGACGACAACCTAAAG
CACATCAAGGCTGTAGCTATCAATCCAGGCAACCTGAGTGATTCTCGCGC
TCTCCGCACCAACACGCCTCTGATACTTAGGATCATCTCCCGCCTCATTA
TCCAGCCGCTCCGGCCGCTGCTGAGACTACTTGACCCGACTATGCGCACG
GCTACGGAGGCCGGGGAGGATGTGGTCGAGTTGGCTGTGGGTGAGAAATA
TGCGGGGGAGGCGGGGTACTTCACCCTTTTGAAGAAGGATGAGAGTTCGC
CTGAGAGTCAGGATGGAGAGAAGCAGGGGAAGATCTGGAAGAAGACGTTG
GAGTGGGCGCAGGTTAGCCCTAAGGATACGGTGTTGAAGCTTGAGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005277KJC3_005277Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005277-T1.utr5p1KJC3_005277-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005277-T1.exon1KJC3_005277-T1.exon1Aspergillus niger KJC3exon
KJC3_005277-T1.exon2KJC3_005277-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005277-T1.cdsKJC3_005277-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005277-T1.utr3p1KJC3_005277-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005277-T1KJC3_005277-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2160506..2161770 +
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