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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2162006..2163356+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005278-T1 ID=KJC3_005278-T1|Name=KJC3_005278-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1351bp|location=Sequence derived from alignment at ch4:2162006..2163356+ (Aspergillus niger KJC3)
CAAAGATATATACCGATCCTGTTTCTCATATGAGTCTCCCTCCCCGCTAT
CCTCAATCACTTTCCCCTCATCTACAACTCCATACACTACCCCAACCACA
GCCACCACCATGGACTCCTTCGAATACAACGCCAACCCCGGCCGAGTCAT
CTTCGGCAGCGGCACATTGAAGAAGCTCCCCGATGAGCTCGCCCGCCAGA
ACCTCAAAGCACCCCTCCTCCTCTCGACCCCGCAGCAAGTCTCCCAAGCC
GAGAATGTCAAAACCGTCCTGAACGGCCAAGTGGCCGGCATCTTCACCGA
AGCTACCATGCACACTCCCACTCACATCACCGACAAGGCATTGGAATACG
CAAAAGCCCAAAGTGCCGACTGCGTCGTCTCCATCGGCGGTGGTAGCACC
ATCGGCCTAGGAAAGGCCATCAGCATCCGCACCGGCCTGCCGCACATCTG
TATCCCGACCACCTATGCGGGCAGTGAGATGACCCCCATTCTGGGTGAAA
CGGCAGACGGATTGAAGAAGACGCGCTCCGACCCGAAGATCCTCCCGGGG
ACTGTGATCTACGATGTGGACCTGACTATGACCTTGCCGGTGGCCATGAG
TGCGACGAGCGGTGTCAATGCCATCGCGCATGCGGGTTAGTTCTACCCAC
TACATTCTTTCTCTCTACATTCCATACTAGAAACAAAGCTAATACAGTGA
ACCAACAGTGGAAGCTCTCTACGCGCGCAACACCAACCCCGTGATCAACC
TAATGGCCCTGGAAGGCACGCGCGCCCTGGCCTCCTCCCTCCCCGAAATT
GTCCAGAACCCCAGCTCCCCCTCCGCGCGCTCCTCCGCCCAATACGGTGC
CTGGCTCTGCGGTACCTGTCTCGGCAGCGTAGGCATGTCCATCCACCACA
AGCTCTGCCACACCCTCGGCGGAAGCTTCAACCTGCCCCATGCAGAGACG
CACACGGCGGTGCTCCCGCACGCTATCTCCTACAATGCGCCGAAGATCCC
CGAGGCCATGAAGAAGTTGGCCGAGGCGCTGCCGGAGAGTAACGGGGATG
CGATCCACGGGCTGAATGTCCTGTTGGAGAAGTTGCAGGTTAAGCGTGGA
TTGAAGGACTTTGGTATGAAGGAGGAGGATATTGATAAGGCGGCGGATAT
TGCGGTTAGTAACCCGTACTGGAACCCTAGGGAGATCCAGCGTGAGCCGA
TCCGGGAATTGATTCGAAGGGTGTGGGCTGGGGAGCCGGCGAGGGCGGAT
TTGTAGATTAGGTTTTTGGGGAGGGGTGTTGTATGTAAATAGTAGGTGTG
TAGAGTTTACATCTCTATCTAGATGTGGAATACGTATACATTTTTTATAT
A back to topCoding sequence (CDS) from alignment at ch4:2162006..2163356+ >KJC3_005278-T1 ID=KJC3_005278-T1|Name=KJC3_005278-T1|organism=Aspergillus niger KJC3|type=CDS|length=2148bp|location=Sequence derived from alignment at ch4:2162006..2163356+ (Aspergillus niger KJC3)
ATGGACTCCTTCGAATACAACGCCAACCCCGGCCGAGTCATCTTCGGCAG
CGGCACATTGAAGAAGCTCCCCGATGAGCTCGCCCGCCAGAACCTCAAAG
CACCCCTCCTCCTCTCGACCCCGCAGCAAGTCTCCCAAGCCGAGAATGTC
AAAACCGTCCTGAACGGCCAAGTGGCCGGCATCTTCACCGAAGCTACCAT
GCACACTCCCACTCACATCACCGACAAGGCATTGGAATACGCAAAAGCCC
AAAGTGCCGACTGCGTCGTCTCCATCGGCGGTGGTAGCACCATCGGCCTA
GGAAAGGCCATCAGCATCCGCACCGGCCTGCCGCACATCTGTATCCCGAC
CACCTATGCGGGCAGTGAGATGACCCCCATTCTGGGTGAAACGGCAGACG
GATTGAAGAAGACGCGCTCCGACCCGAAGATCCTCCCGGGGACTGTGATC
TACGATGTGGACCTGACTATGACCTTGCCGGTGGCCATGAGTGCGACGAG
CGGTGTCAATGCCATCGCGCATGCGGTGGAAGCTCTCTACGCGCGCAACA
CCAACCCCGTGATCAACCTAATGGCCCTGGAAGGCACGCGCGCCCTGGCC
TCCTCCCTCCCCGAAATTGTCCAGAACCCCAGCTCCCCCTCCGCGCGCTC
CTCCGCCCAATACGGTGCCTGGCTCTGCGGTACCTGTCTCGGCAGCGTAG
GCATGTCCATCCACCACAAGCTCTGCCACACCCTCGGCGGAAGCTTCAAC
CTGCCCCATGCAGAGACGCACACGGCGGTGCTCCCGCACGCTATCTCCTA
CAATGCGCCGAAGATCCCCGAGGCCATGAAGAAGTTGGCCGAGGCGCTGC
CGGAGAGTAACGGGGATGCGATCCACGGGCTGAATGTCCTGTTGGAGAAG
TTGCAGGTTAAGCGTGGATTGAAGGACTTTGGTATGAAGGAGGAGGATAT
TGATAAGGCGGCGGATATTGCGGTTAGTAACCCGTACTGGAACCCTAGGG
AGATCCAGCGTGAGCCGATCCGGGAATTGATTCGAAGGGTGTGGGCTGGG
GAGCCGGCGAGGGCGGATTTGTAGATGGACTCCTTCGAATACAACGCCAA
CCCCGGCCGAGTCATCTTCGGCAGCGGCACATTGAAGAAGCTCCCCGATG
AGCTCGCCCGCCAGAACCTCAAAGCACCCCTCCTCCTCTCGACCCCGCAG
CAAGTCTCCCAAGCCGAGAATGTCAAAACCGTCCTGAACGGCCAAGTGGC
CGGCATCTTCACCGAAGCTACCATGCACACTCCCACTCACATCACCGACA
AGGCATTGGAATACGCAAAAGCCCAAAGTGCCGACTGCGTCGTCTCCATC
GGCGGTGGTAGCACCATCGGCCTAGGAAAGGCCATCAGCATCCGCACCGG
CCTGCCGCACATCTGTATCCCGACCACCTATGCGGGCAGTGAGATGACCC
CCATTCTGGGTGAAACGGCAGACGGATTGAAGAAGACGCGCTCCGACCCG
AAGATCCTCCCGGGGACTGTGATCTACGATGTGGACCTGACTATGACCTT
GCCGGTGGCCATGAGTGCGACGAGCGGTGTCAATGCCATCGCGCATGCGG
TGGAAGCTCTCTACGCGCGCAACACCAACCCCGTGATCAACCTAATGGCC
CTGGAAGGCACGCGCGCCCTGGCCTCCTCCCTCCCCGAAATTGTCCAGAA
CCCCAGCTCCCCCTCCGCGCGCTCCTCCGCCCAATACGGTGCCTGGCTCT
GCGGTACCTGTCTCGGCAGCGTAGGCATGTCCATCCACCACAAGCTCTGC
CACACCCTCGGCGGAAGCTTCAACCTGCCCCATGCAGAGACGCACACGGC
GGTGCTCCCGCACGCTATCTCCTACAATGCGCCGAAGATCCCCGAGGCCA
TGAAGAAGTTGGCCGAGGCGCTGCCGGAGAGTAACGGGGATGCGATCCAC
GGGCTGAATGTCCTGTTGGAGAAGTTGCAGGTTAAGCGTGGATTGAAGGA
CTTTGGTATGAAGGAGGAGGATATTGATAAGGCGGCGGATATTGCGGTTA
GTAACCCGTACTGGAACCCTAGGGAGATCCAGCGTGAGCCGATCCGGGAA
TTGATTCGAAGGGTGTGGGCTGGGGAGCCGGCGAGGGCGGATTTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0018506 | maleylacetate reductase activity |
| GO:0046872 | metal ion binding |
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005278-T1.utr5p1 | KJC3_005278-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005278-T1.utr3p1 | KJC3_005278-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR034786 |
| DBxref | InterPro:IPR016435 |
| DBxref | InterPro:IPR001670 |
| DBxref | PFAM:PF13685 |
| DBxref | PFAM:PF00465 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2162006..2163356 + |
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