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KJC3_005285-T1, KJC3_005285-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005285-T1
Unique NameKJC3_005285-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2176164..2178534+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005285-T1 ID=KJC3_005285-T1|Name=KJC3_005285-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2371bp|location=Sequence derived from alignment at ch4:2176164..2178534+ (Aspergillus niger KJC3)
CACTGCTATGTATACTAATTAATGCTGACGCAATATCACAGTCTGTGATG
CTGTGCATCCTCCCTGAAAATGGATTCGAAAGCCACTCTGGGCAGTATTC
AGAAAGCCGTCTGGGCCGGAAAGCTGCCCTTACATATCACCTTGGCCCCA
TCAGAGAGCCGTACATTTGACCAGACAGATCCATACCTAGTACGTCCTCT
TCTAGTACCTGATGAACTAGAGCTAACTCACTCAGATCTCCTGTCCTCGC
ATATCATACTTACCATCGCTTCTCCCAAGGCTGAGAGCTTTCTTCGCCCC
CTCCTTAATTGACCCCGGTTCCCGCCCGCACGAAGGCTGGTTCTCCTTCG
AGGGCGTTCCGTTGAAATGGCACTACCCAGTTGGCCTCCTTTATGACCTT
TATGCCGGAGCAGATCCTGCCTCTAAAGGAGGTGCTGAAACTGACTTGGT
ATCCACAACGGATGAAGACCCGTTACCATGGCGTCTAGTCGTGCATTTCA
GCGACTGGCCTGATGAAGAACTCGTCCGACTTGATGCAGATGGGATAGTG
ATGCACGATGCTTTTATCAACAGCGTCAAGGAAGCAGATTTCTTGAGGAA
CGGTACCGCTAAAGGAATCATGACCCTTTCCAGGGAGGATTCGGCGGGGC
TTTGGGAGTCAGTGAGAGATGGTACGTTATTCCATTCACTTGGACTTGAA
CAAAGAGGGAAGTGCTAACCATGCACCCAGTGGACCTTCCAAACTTCCAG
CGAATATCCAACATTCTTCTACCACCACAGTCACAGCCGTTTCGCAACAT
TCCTGTCCGGTTCTTTCTCCCCCTTCCCCCGGACTCAGACTCGCCCTCTC
TCAAAGTAGTCCAGTCTCCAATTCCACCAACCATTCAACCAACTTCCGGA
TCCAGCGCCAGTGTCATTGCAAGTCAATCCATACTGAGTACGTCCAGGGG
TCCTCAACCGCAGACCATAGGGTCAGCACTGCACTCACTACTACCGCATT
TATTTCCTAGTCGGAGGACCCCTGTCCTGGCAAAGCCTGTACTGCATGGT
GCCGCGGTGCCAATGGGTGCACCGCTAGACGAAGTGGTGAGGTGTTCAGG
GTATGGCGATGGGTGGCTCTACATTGTGATCAGAATGATGGGTTAACACA
TAGTTGCCTTACTGGCAAAATGTTTCGCCATCGATGACTTGGCATTGCCG
TTAGATAGCGTTGATATCATTTGATATTACCGGTTCTTCAATATACTAGT
ATCGTTGCACTACCTATATTCTCTTTTCTCTACCCCAAGGTGAATAGTCA
ATTCTAGTTGCGATAATTACATTTGCCCAAGAAGATCTTTGTACGCGTTG
GTCTTAGCTCATCAACTGACAGCCCCATGATTGCTGATGATGAGTAGGTA
GACATTAGATCCTCGCTAGCAAGTGACTTTGACTTTAAAGGCAGTCATGA
ACTTTCGCAGAGCATTAATGTTAGTATTATATTCGAGGCGCCCTTGTAAG
CACCTGGAAGTTGGGCCGAGTTCTCCGTCCGTTGCTAGCCCGGCGTGATA
GTGGGAGAAGGTAATCAGTAATGGTACTACTCAATATGTGTCCCTCATTC
ACATCACTGTTGAGCCATATCTACCCCAAGTGCCAGTCACCTCACAGACC
CACAACAATAAATTGATAAGGTGACAGTAATGGGCAGAGTACCAAGTATA
GAAACACATAACCCGTGCAGCACAACCGCGCTTACAATGCAATAATATCA
AGGAAGGAATAACTAAAAGCGTCTATCAAACTAACATCTTAATTTAGAAA
TATGTGAAACTCGAGGGACCGTCAAGATGCAAGATGGAGATCGAAGTCCC
AGGGTAGGTAAGTGTAAAGCATGCAACGTCTGTATGAAAAGGCGTATTGA
ACGTAAAGTAAGACACGTACGGTCAGTAATATACCAGTATGGTACAGAAA
TACAGATCGTCAGGGTAGAAGATCATATCTAGATCCTGAAATAGACACAG
CAAGCAGGGGGGATGTCGCAAGCGCAAGAGGTATGACTGGATGGAGGGTA
GAAAGTGGATGTATGAATTGCTTCATTCATTTCTATTATTATCGTGGCGC
AGGGAGGGAGTGGGAAACGAGATTAGAGCCTGGGGTAGGATGGTAGCGTG
CAGTTGGTGGTGATGGTGATTTGCGTCAATGGAAAATGCAGGTAGGGGTT
TAGGGTGGAACGCAAGCGCGGTTCGGATAGGACAAAGTTGTTGATGATTG
GGGGAGAAGTAAGGTAGTGGATGAGATGAACTTGTGATGCTGGGTGGGAA
GAGGGGAATGATGGTGGGAGAATGAGAAAGGTTAGTATGTTGGCCTCATG
CTAGTGCTTTGAGGATGGTCC
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Coding sequence (CDS) from alignment at ch4:2176164..2178534+

>KJC3_005285-T1 ID=KJC3_005285-T1|Name=KJC3_005285-T1|organism=Aspergillus niger KJC3|type=CDS|length=2916bp|location=Sequence derived from alignment at ch4:2176164..2178534+ (Aspergillus niger KJC3)
ATGGATTCGAAAGCCACTCTGGGCAGTATTCAGAAAGCCGTCTGGGCCGG
AAAGCTGCCCTTACATATCACCTTGGCCCCATCAGAGAGCCGTACATTTG
ACCAGACAGATCCATACCTAATCTCCTGTCCTCGCATATCATACTTACCA
TCGCTTCTCCCAAGGCTGAGAGCTTTCTTCGCCCCCTCCTTAATTGACCC
CGGTTCCCGCCCGCACGAAGGCTGGTTCTCCTTCGAGGGCGTTCCGTTGA
AATGGCACTACCCAGTTGGCCTCCTTTATGACCTTTATGCCGGAGCAGAT
CCTGCCTCTAAAGGAGGTGCTGAAACTGACTTGGTATCCACAACGGATGA
AGACCCGTTACCATGGCGTCTAGTCGTGCATTTCAGCGACTGGCCTGATG
AAGAACTCGTCCGACTTGATGCAGATGGGATAGTGATGCACGATGCTTTT
ATCAACAGCGTCAAGGAAGCAGATTTCTTGAGGAACGGTACCGCTAAAGG
AATCATGACCCTTTCCAGGGAGGATTCGGCGGGGCTTTGGGAGTCAGTGA
GAGATGTGGACCTTCCAAACTTCCAGCGAATATCCAACATTCTTCTACCA
CCACAGTCACAGCCGTTTCGCAACATTCCTGTCCGGTTCTTTCTCCCCCT
TCCCCCGGACTCAGACTCGCCCTCTCTCAAAGTAGTCCAGTCTCCAATTC
CACCAACCATTCAACCAACTTCCGGATCCAGCGCCAGTGTCATTGCAAGT
CAATCCATACTGAGTACGTCCAGGGGTCCTCAACCGCAGACCATAGGGTC
AGCACTGCACTCACTACTACCGCATTTATTTCCTAGTCGGAGGACCCCTG
TCCTGGCAAAGCCTGTACTGCATGGTGCCGCGGTGCCAATGGGTGCACCG
CTAGACGAAGTGGTGAGGTGTTCAGGGTATGGCGATGGGTGGCTCTACAT
TGTGATCAGAATGATGGGTTAAATGGATTCGAAAGCCACTCTGGGCAGTA
TTCAGAAAGCCGTCTGGGCCGGAAAGCTGCCCTTACATATCACCTTGGCC
CCATCAGAGAGCCGTACATTTGACCAGACAGATCCATACCTAATCTCCTG
TCCTCGCATATCATACTTACCATCGCTTCTCCCAAGGCTGAGAGCTTTCT
TCGCCCCCTCCTTAATTGACCCCGGTTCCCGCCCGCACGAAGGCTGGTTC
TCCTTCGAGGGCGTTCCGTTGAAATGGCACTACCCAGTTGGCCTCCTTTA
TGACCTTTATGCCGGAGCAGATCCTGCCTCTAAAGGAGGTGCTGAAACTG
ACTTGGTATCCACAACGGATGAAGACCCGTTACCATGGCGTCTAGTCGTG
CATTTCAGCGACTGGCCTGATGAAGAACTCGTCCGACTTGATGCAGATGG
GATAGTGATGCACGATGCTTTTATCAACAGCGTCAAGGAAGCAGATTTCT
TGAGGAACGGTACCGCTAAAGGAATCATGACCCTTTCCAGGGAGGATTCG
GCGGGGCTTTGGGAGTCAGTGAGAGATGTGGACCTTCCAAACTTCCAGCG
AATATCCAACATTCTTCTACCACCACAGTCACAGCCGTTTCGCAACATTC
CTGTCCGGTTCTTTCTCCCCCTTCCCCCGGACTCAGACTCGCCCTCTCTC
AAAGTAGTCCAGTCTCCAATTCCACCAACCATTCAACCAACTTCCGGATC
CAGCGCCAGTGTCATTGCAAGTCAATCCATACTGAGTACGTCCAGGGGTC
CTCAACCGCAGACCATAGGGTCAGCACTGCACTCACTACTACCGCATTTA
TTTCCTAGTCGGAGGACCCCTGTCCTGGCAAAGCCTGTACTGCATGGTGC
CGCGGTGCCAATGGGTGCACCGCTAGACGAAGTGGTGAGGTGTTCAGGGT
ATGGCGATGGGTGGCTCTACATTGTGATCAGAATGATGGGTTAAATGGAT
TCGAAAGCCACTCTGGGCAGTATTCAGAAAGCCGTCTGGGCCGGAAAGCT
GCCCTTACATATCACCTTGGCCCCATCAGAGAGCCGTACATTTGACCAGA
CAGATCCATACCTAATCTCCTGTCCTCGCATATCATACTTACCATCGCTT
CTCCCAAGGCTGAGAGCTTTCTTCGCCCCCTCCTTAATTGACCCCGGTTC
CCGCCCGCACGAAGGCTGGTTCTCCTTCGAGGGCGTTCCGTTGAAATGGC
ACTACCCAGTTGGCCTCCTTTATGACCTTTATGCCGGAGCAGATCCTGCC
TCTAAAGGAGGTGCTGAAACTGACTTGGTATCCACAACGGATGAAGACCC
GTTACCATGGCGTCTAGTCGTGCATTTCAGCGACTGGCCTGATGAAGAAC
TCGTCCGACTTGATGCAGATGGGATAGTGATGCACGATGCTTTTATCAAC
AGCGTCAAGGAAGCAGATTTCTTGAGGAACGGTACCGCTAAAGGAATCAT
GACCCTTTCCAGGGAGGATTCGGCGGGGCTTTGGGAGTCAGTGAGAGATG
TGGACCTTCCAAACTTCCAGCGAATATCCAACATTCTTCTACCACCACAG
TCACAGCCGTTTCGCAACATTCCTGTCCGGTTCTTTCTCCCCCTTCCCCC
GGACTCAGACTCGCCCTCTCTCAAAGTAGTCCAGTCTCCAATTCCACCAA
CCATTCAACCAACTTCCGGATCCAGCGCCAGTGTCATTGCAAGTCAATCC
ATACTGAGTACGTCCAGGGGTCCTCAACCGCAGACCATAGGGTCAGCACT
GCACTCACTACTACCGCATTTATTTCCTAGTCGGAGGACCCCTGTCCTGG
CAAAGCCTGTACTGCATGGTGCCGCGGTGCCAATGGGTGCACCGCTAGAC
GAAGTGGTGAGGTGTTCAGGGTATGGCGATGGGTGGCTCTACATTGTGAT
CAGAATGATGGGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006914autophagy
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG5KJC3_005285Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005285-T1KJC3_005285-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005285-T1.utr5p1KJC3_005285-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005285-T1.exon1KJC3_005285-T1.exon1Aspergillus niger KJC3exon
KJC3_005285-T1.exon2KJC3_005285-T1.exon2Aspergillus niger KJC3exon
KJC3_005285-T1.exon3KJC3_005285-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005285-T1.cdsKJC3_005285-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005285-T1.utr3p1KJC3_005285-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007239
DBxrefInterPro:IPR042527
DBxrefInterPro:IPR042526
DBxrefPFAM:PF04106
Productautophagy protein 5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2176164..2178534 +
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