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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2228888..2230869+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005293-T1 ID=KJC3_005293-T1|Name=KJC3_005293-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1982bp|location=Sequence derived from alignment at ch4:2228888..2230869+ (Aspergillus niger KJC3)
CCAACATCTCCGTTGAGGAAGTTGAAGATAACAGAATCTCCCTTCCTCTC
CTCCAGCTCCTCTATACCCTCCCCGGTTGGACCCTCCCTCTCGTCCATCA
TGTTGTTCCGCGCTGCGGTCCGTCAGTCCGCGCCCTTGAGGCGTCAGGCC
CTCACTCCTCTTGCTCGTCGCTCCGTCACCACCGACGCCGCCTCGTCGCA
TGCTGAAAATGTCCCCCAGGTTCGTTGAGAGCTCCCTGGATATCCCGGAT
TGACCTCCGCAATGGCCCTGGCTAATGCGATTTCCATCTATCTACAGGAG
GATGACAAGCCCTTCACTGTCCGCCTCTCCGACGAGAGCTTCGAGACCTA
CGAGATCGACCCTCCCCCGTACACCCTGGAGATCACCAAGAAGGAGCTCA
AGCAGATGTACTACGACATGGTTTCGATGAGGTATGGCCACCGTTTGGCC
CTTTGCTTTTTCTTTCCACAAGCCTCATGCAGAATCTAATCTATCGCTCA
GACGCATGGAGATGGCCGCCGACCGTCTTTACAAGGAGAAGAAGATCAGA
GGTTTCTGCCACTTGTCTACCGGTCAGGAAGCCGTCGCCACCGGTATCGA
GCACGCTATCACCCGCGACGACAAGGTCATCACTGCCTACCGTTGCCACG
GTTTCGCCATGATGCGCGGTGGTACCGTCCGCTCCATCATCGGTGAGCTG
CTCGGTCGCCGTGAGGGTATCGCCTACGGAAAGGGTGGTTCCATGCACAT
GTTCGCCCCCAACTTCTACGGCGGTAACGGTATCGTCGGTGCCCAGGTCC
CCGTCGGTGCTGGTCTCGCTTTCGCCCAGCAGTACAACGAGGAGCCCACC
ACCAGTATCGTCCTCTACGGTGACGGTGCCTCCAACCAGGGTCAGGTCTT
CGAGGCCTTCAACATGGCCAAGCTGTGGAACCTCCCCGTTCTGTTCGGTT
GTGAGAGTAAGTCATAGTCCTCACGCCACTCCATCCAAGACAGCCAAAGC
TAATTCCTTTTCTACTAGACAACAAGTACGGTATGGGTACCTCCGCCGCT
CGCTCCTCCGCCTTGACCGAGTACTACAAGCGTGGTCAGTACATCCCTGG
TATCAAGGTCAACGGCATGGACGTCCTGGCCACCAAGGCCGCCGTCAAGT
ACGGTAAGGACTGGGCCGTGGCCGGCAACGGCCCCCTGGTCTACGAGTAC
GTCACCTACCGTTACGGTGGTCACTCCATGTCCGACCCCGGTACCACCTA
CCGTAGCCGTGAGGAGATCCAGCGCATGCGCAGCACCAACGACCCCATCG
CCGGTCTCAAGCAGAAGATCCTCGACTGGAACGTCTGCTCCGAGGACGAG
CTCAAGTCCCTCGACAAGGCCGCTCGTGCCCACGTCGACGAGGAGGTCGC
CATCGCCGAGAAGATGCCCGCTCCCGAGAACACCTCCCGCATTCTCTTCG
AGGACATCTACGTCCGTGGCTCCGAGCCCAAGTGGATGCGTGGTCGCACT
GTCGACGAGACCTTCTACTACTAGATATACCCATACCACTCAAATCCAAA
TCTAGATATGTTTCTTTAAAACACAAGGCTCCCTATTTTCCAGTGTGAAG
AATGAAGCTCAGTTGGAAGAACTCTGGATGATGATGACAAGGCGAGAGAA
GAAAAAGAAAGAAATAGGAGGAGCGAGTGAGAGGAAGGTCATCCTTTTGT
TTTTCTTGTTAAACACAAAAGTTTAGACCGCGCACACACATCACGCACCA
TACCATTTGGGATTGGCAGGCTCCTACCTACTTACTACGCAAAGGCATCC
ATACCATGGATATGTTTACTATGTAATTTAGCCCGGGAAATTTTTCTGTT
TTTATTTATATTTTTGCATTACTCCAAACCTCATCTTGAAGTTTCAGATT
CTCCTAGTATGTCTCTACTCATAATAAAGCATTAAGTCGGGGAATACACC
TCTGGAGATCCATTAGATGCCTGTCGGTGGTA back to topCoding sequence (CDS) from alignment at ch4:2228888..2230869+ >KJC3_005293-T1 ID=KJC3_005293-T1|Name=KJC3_005293-T1|organism=Aspergillus niger KJC3|type=CDS|length=2058bp|location=Sequence derived from alignment at ch4:2228888..2230869+ (Aspergillus niger KJC3)
ATGGCCACCGTTTGGCCCTTTGCTTTTTCTTTCCACAAGCCTCATGCAGA
ATCTAATCTATCGCTCAGACGCATGGAGATGGCCGCCGACCGTCTTTACA
AGGAGAAGAAGATCAGAGGTTTCTGCCACTTGTCTACCGGTCAGGAAGCC
GTCGCCACCGGTATCGAGCACGCTATCACCCGCGACGACAAGGTCATCAC
TGCCTACCGTTGCCACGGTTTCGCCATGATGCGCGGTGGTACCGTCCGCT
CCATCATCGGTGAGCTGCTCGGTCGCCGTGAGGGTATCGCCTACGGAAAG
GGTGGTTCCATGCACATGTTCGCCCCCAACTTCTACGGCGGTAACGGTAT
CGTCGGTGCCCAGGTCCCCGTCGGTGCTGGTCTCGCTTTCGCCCAGCAGT
ACAACGAGGAGCCCACCACCAGTATCGTCCTCTACGGTGACGGTGCCTCC
AACCAGGGTCAGGTCTTCGAGGCCTTCAACATGGCCAAGCTGTGGAACCT
CCCCGTTCTGTTCGGTTGTGAGAACAACAAGTACGGTATGGGTACCTCCG
CCGCTCGCTCCTCCGCCTTGACCGAGTACTACAAGCGTGGTCAGTACATC
CCTGGTATCAAGGTCAACGGCATGGACGTCCTGGCCACCAAGGCCGCCGT
CAAGTACGGTAAGGACTGGGCCGTGGCCGGCAACGGCCCCCTGGTCTACG
AGTACGTCACCTACCGTTACGGTGGTCACTCCATGTCCGACCCCGGTACC
ACCTACCGTAGCCGTGAGGAGATCCAGCGCATGCGCAGCACCAACGACCC
CATCGCCGGTCTCAAGCAGAAGATCCTCGACTGGAACGTCTGCTCCGAGG
ACGAGCTCAAGTCCCTCGACAAGGCCGCTCGTGCCCACGTCGACGAGGAG
GTCGCCATCGCCGAGAAGATGCCCGCTCCCGAGAACACCTCCCGCATTCT
CTTCGAGGACATCTACGTCCGTGGCTCCGAGCCCAAGTGGATGCGTGGTC
GCACTGTCGACGAGACCTTCTACTACTAGATGGCCACCGTTTGGCCCTTT
GCTTTTTCTTTCCACAAGCCTCATGCAGAATCTAATCTATCGCTCAGACG
CATGGAGATGGCCGCCGACCGTCTTTACAAGGAGAAGAAGATCAGAGGTT
TCTGCCACTTGTCTACCGGTCAGGAAGCCGTCGCCACCGGTATCGAGCAC
GCTATCACCCGCGACGACAAGGTCATCACTGCCTACCGTTGCCACGGTTT
CGCCATGATGCGCGGTGGTACCGTCCGCTCCATCATCGGTGAGCTGCTCG
GTCGCCGTGAGGGTATCGCCTACGGAAAGGGTGGTTCCATGCACATGTTC
GCCCCCAACTTCTACGGCGGTAACGGTATCGTCGGTGCCCAGGTCCCCGT
CGGTGCTGGTCTCGCTTTCGCCCAGCAGTACAACGAGGAGCCCACCACCA
GTATCGTCCTCTACGGTGACGGTGCCTCCAACCAGGGTCAGGTCTTCGAG
GCCTTCAACATGGCCAAGCTGTGGAACCTCCCCGTTCTGTTCGGTTGTGA
GAACAACAAGTACGGTATGGGTACCTCCGCCGCTCGCTCCTCCGCCTTGA
CCGAGTACTACAAGCGTGGTCAGTACATCCCTGGTATCAAGGTCAACGGC
ATGGACGTCCTGGCCACCAAGGCCGCCGTCAAGTACGGTAAGGACTGGGC
CGTGGCCGGCAACGGCCCCCTGGTCTACGAGTACGTCACCTACCGTTACG
GTGGTCACTCCATGTCCGACCCCGGTACCACCTACCGTAGCCGTGAGGAG
ATCCAGCGCATGCGCAGCACCAACGACCCCATCGCCGGTCTCAAGCAGAA
GATCCTCGACTGGAACGTCTGCTCCGAGGACGAGCTCAAGTCCCTCGACA
AGGCCGCTCGTGCCCACGTCGACGAGGAGGTCGCCATCGCCGAGAAGATG
CCCGCTCCCGAGAACACCTCCCGCATTCTCTTCGAGGACATCTACGTCCG
TGGCTCCGAGCCCAAGTGGATGCGTGGTCGCACTGTCGACGAGACCTTCT
ACTACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005293-T1.utr3p1 | KJC3_005293-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262Q8D |
| DBxref | InterPro:IPR029061 |
| DBxref | InterPro:IPR001017 |
| DBxref | PFAM:PF00676 |
| Product | alpha subunit of pyruvate dehydrogenase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2228888..2230869 + |
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