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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2230847..2233184- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005294-T1 ID=KJC3_005294-T1|Name=KJC3_005294-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2338bp|location=Sequence derived from alignment at ch4:2230847..2233184- (Aspergillus niger KJC3)
CGAGCAATTTTCATTTCGATTTCGACTTCGACCTTCGACTTTCCTTTTCC
TCTTTCTTTCCTCTTCAATCACCAGCACGCCGGCAGTGCGTCCACTGCTG
CTGCTTCATCCTCATCGTCCTTTTTTCTGATTATTGTCCTCCTTATAATA
CCCCGCCAGTCGCACAGACAGTCCAGTATCACAGACCATGTCAATGTATC
CCTGGCATGGCTCCACGACCAACGCCGCCGCCGCCTCTTCTGGACCTCGC
ATCGACTCCCCCTCCTCCACTACTCAGTCCTCCCTACAAGTGCCTGGGTT
ACGATGGCTCCCTTCCATGATCTCGCGCGCAACACCTCTTCCCACCTTGT
CATCTTCCAATCTTCGTATAGCCCAGCAGCAGCATCAGCAACAACACCCG
TCGCCGCAGCCTTCCCAAACACCACCGCAGCCGCAGCCGCAGCCGCAAAC
TCCCCTCTCCCATCCTCATCCCCATTCCAATCAACACAATAACCAACCGG
CACGCCCGCAAACACGCCAACCTGGACCAGCCGTTATCGATTCGCGATCC
CAACAACCACTGACTGAGGCCCTCGAAAGCGAAGCAAGTGACCATACGGA
TCCCGGTGCGCGCGACCCCACCCACACCGACGCTCTCGCAGATCCCGACT
ACGGCACATCGCCCGATAATTTAGCTCAGGGAAGGAATATTTCCCGACAA
TCCGGACATAGACCTACGACTACCGCTGGGATTATGCCTAACGGCACCGC
GGCTAATCGAGCCGCACTCCATGCAGCAGCAGCCAGTATCGTTAGACCCT
ATCCAATGGAAGACCATGACGACGATCCCGATGGCGCGCCAAACGGCGAT
CGGTCGCGCAAGCATGGAAAGCGATTGACTACCCTGGAAGAAGTCTCGTT
GTTCAATATCTGCAACCGGCATGCGAGCGAATTCGGACAGCGTAGTAATC
TCTGTAAATGGTGGATGACTGTTACAGAAGAGTTTACGCAGGACCAGGGA
CACCCATACTCGTGGCATTCGGTGCGTCGTAAAGTGGAGTTGGTTACAAA
ACAGCGGATGAAGTTCCTCGACGAACAGCGCGACAAGGGCGCGGACGCGA
GCGAAGACCTGTCGAATCCCCGGTGGCGGGCAGCAGTGGACGCATGGATT
CCTACATGGCGGAGATGGGAGGACGCAGAGGCACGGCGAATCGAGAAGCG
CGATTCGCGCAAACCGAGAAAGAGGAAAGACCGGCCATGGGACACATGGA
CTATGAGTCCCAGTGACGAGTGGAAAGGCACAACAAGCCCACTTCCTACT
GTCAGCCAACACCAACCTGGACCTGTGACTCCTGTATCGCAGAGCACAGT
GCGACTACCCCCAGGGTTCGACAGTATGTTTTCGAATCAGGGACTACAGA
CCCCGTCGCCAGCGATTAGTGTTCCGGATGGGCTTGCGACACAACAGCGG
GCGACGCCATCCACGACTGTAGCAGCAGCAGCGGCTGCTGCTGCTGCTGC
TGCAACAAATAATCCGCCATCAGGGACGGACAACTCCATGATGAGCGCTA
TGCTGGAGACCCTGGGAAAACTCAACCGTCACCTCGACTCGGTTAACACC
CAGCCTACCTCATCTGCGATCAAAAAACCGACGTCGCCCTCCAGATCCCG
TGCTCGCGAACAACGCCGGGACGCTCAACCAGCGGAACTCAACACAACTA
CCAATAACGCCCCTCCTGCCTCCGTCGCACAAACCGGACTTACGCACTTA
TCATCCGACTTCATCAACAAACTCAAGGATGAGCTCCGTCAGGAAATGCG
CGCCGAAGTGCGTGCCGAGCTAGAGAAAGATCGAGCCACACTCGAAGAGA
AATTGGACTCGGTGCAGCGGACGCAGGAAATGATCCTTGAGATGTTGAGA
CAGGAGCCTGCTTGAGAACCCTTTCTCTGTCTCTCGTTCTTTCTTATTTC
CTCGTTCTTCTTTTCTCTCATATTATTCACATCCTCCTGCTTTCTGTTTA
AATATTCGTGCCTCCTTTGATTTCACCATATGATACCCATGGACGAGTAT
GTCGACTATCTTATATCCTATGTCTTTTATTAGCTTTCTTTTCGATTCCT
ATTGTCTTTGAATGCTGCAGTGCGGATATGTGACTTGACTGAGTGACTGA
CCGACTGACTGTTGGCGACATCCTTTCTCTTCTCTTTTCATATTTCCATT
CTATTCAATTTCTCATATATTCACTATGACCTTTCGGGGAAACAATACAT
ATATAACCTACCTATACTTTCACTACATCCAAGGTCCATATCTGTATGAA
GTAGTGCCGAGTAAATACCACCGACAGGCATCTAATGG back to topCoding sequence (CDS) from alignment at ch4:2230847..2233184- >KJC3_005294-T1 ID=KJC3_005294-T1|Name=KJC3_005294-T1|organism=Aspergillus niger KJC3|type=CDS|length=1728bp|location=Sequence derived from alignment at ch4:2230847..2233184- (Aspergillus niger KJC3)
ATGTCAATGTATCCCTGGCATGGCTCCACGACCAACGCCGCCGCCGCCTC
TTCTGGACCTCGCATCGACTCCCCCTCCTCCACTACTCAGTCCTCCCTAC
AAGTGCCTGGGTTACGATGGCTCCCTTCCATGATCTCGCGCGCAACACCT
CTTCCCACCTTGTCATCTTCCAATCTTCGTATAGCCCAGCAGCAGCATCA
GCAACAACACCCGTCGCCGCAGCCTTCCCAAACACCACCGCAGCCGCAGC
CGCAGCCGCAAACTCCCCTCTCCCATCCTCATCCCCATTCCAATCAACAC
AATAACCAACCGGCACGCCCGCAAACACGCCAACCTGGACCAGCCGTTAT
CGATTCGCGATCCCAACAACCACTGACTGAGGCCCTCGAAAGCGAAGCAA
GTGACCATACGGATCCCGGTGCGCGCGACCCCACCCACACCGACGCTCTC
GCAGATCCCGACTACGGCACATCGCCCGATAATTTAGCTCAGGGAAGGAA
TATTTCCCGACAATCCGGACATAGACCTACGACTACCGCTGGGATTATGC
CTAACGGCACCGCGGCTAATCGAGCCGCACTCCATGCAGCAGCAGCCAGT
ATCGTTAGACCCTATCCAATGGAAGACCATGACGACGATCCCGATGGCGC
GCCAAACGGCGATCGGTCGCGCAAGCATGGAAAGCGATTGACTACCCTGG
AAGAAGTCTCGTTGTTCAATATCTGCAACCGGCATGCGAGCGAATTCGGA
CAGCGTAGTAATCTCTGTAAATGGTGGATGACTGTTACAGAAGAGTTTAC
GCAGGACCAGGGACACCCATACTCGTGGCATTCGGTGCGTCGTAAAGTGG
AGTTGGTTACAAAACAGCGGATGAAGTTCCTCGACGAACAGCGCGACAAG
GGCGCGGACGCGAGCGAAGACCTGTCGAATCCCCGGTGGCGGGCAGCAGT
GGACGCATGGATTCCTACATGGCGGAGATGGGAGGACGCAGAGGCACGGC
GAATCGAGAAGCGCGATTCGCGCAAACCGAGAAAGAGGAAAGACCGGCCA
TGGGACACATGGACTATGAGTCCCAGTGACGAGTGGAAAGGCACAACAAG
CCCACTTCCTACTGTCAGCCAACACCAACCTGGACCTGTGACTCCTGTAT
CGCAGAGCACAGTGCGACTACCCCCAGGGTTCGACAGTATGTTTTCGAAT
CAGGGACTACAGACCCCGTCGCCAGCGATTAGTGTTCCGGATGGGCTTGC
GACACAACAGCGGGCGACGCCATCCACGACTGTAGCAGCAGCAGCGGCTG
CTGCTGCTGCTGCTGCAACAAATAATCCGCCATCAGGGACGGACAACTCC
ATGATGAGCGCTATGCTGGAGACCCTGGGAAAACTCAACCGTCACCTCGA
CTCGGTTAACACCCAGCCTACCTCATCTGCGATCAAAAAACCGACGTCGC
CCTCCAGATCCCGTGCTCGCGAACAACGCCGGGACGCTCAACCAGCGGAA
CTCAACACAACTACCAATAACGCCCCTCCTGCCTCCGTCGCACAAACCGG
ACTTACGCACTTATCATCCGACTTCATCAACAAACTCAAGGATGAGCTCC
GTCAGGAAATGCGCGCCGAAGTGCGTGCCGAGCTAGAGAAAGATCGAGCC
ACACTCGAAGAGAAATTGGACTCGGTGCAGCGGACGCAGGAAATGATCCT
TGAGATGTTGAGACAGGAGCCTGCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005294-T1.utr3p1 | KJC3_005294-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005294-T1.utr5p1 | KJC3_005294-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2230847..2233184 - |
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