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KJC3_005295-T1, KJC3_005295-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005295-T1
Unique NameKJC3_005295-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2233407..2235360-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005295-T1 ID=KJC3_005295-T1|Name=KJC3_005295-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1954bp|location=Sequence derived from alignment at ch4:2233407..2235360- (Aspergillus niger KJC3)
ATCACGTGCATCTGCGAAGTTTTGGGCGGCCGGGAATGCATGGGAAAAGA
GGCCGACGGGCAGCGAGACAGACAAGAAGACATCTGCTAGCAGGCCATTC
CCTGCCCATCTCGCCATCATGAGGAACAGGGCGACCCAGCATCTGAGCAA
GCCGGTAAGGACATTTCTTTCTTTTTTCTTGCTCTGTCTCCTTGCTCATC
TCGCCGCAATTGCTAATTCTGGTATGCTTTGCTTAGAAAGTCCGGCAATC
ATGGAGCAAATGGAACCTATATAACATGAAGCGGTTCTCCGTCAAGAACC
CCATGTTCCGAACTCATTTCCAGCAAAAATGGGATGCCAAGTCGATAGCC
CGTGGATATCATGGCGAACAAGTCTCCGAGAAGCACTGGGTGCGCATGTT
TTCTCCCCGCATTCGTAGCGTGGTGCCCATGGATCCCGCCAAACTGGCCA
AAGACGATGGTTCTGCCTTGTCTGCCGGCCGTGGTATGGGTGTTGAGTCG
CGTTCTGACACAGCCGCGCATCTTAAACTCTCAAAATACGAGAAAGCCGA
CGCCGACCAACTGGAAAGGCCTTTTCCCTATACACAGGCGACTTTTGCTC
CCCTAGAGCGCCGGCTGGATGTGGCCGTCTTCCGGGCTATGTTCGCTAGC
AGTACGAGGCAGGCGCGGCAATTTGTCATTCATGGAGCGGTCACTGTCAA
TGGAAAGAAGGTGAGTGTGCCTGAGACGCTGCATGGTCCTTTTCATTTAA
GCGCTGCCATCGAAAGCTGATCGGTTACGTTTGACAGATGAGATACCCCG
GTTACCTGCTCAACCCTGGTGATCTTTTCCAGGTCGAACCCGAGCGTGTC
ATGTTTGCCACCGGTGCTCCAAAGGACAAGTACGACCGGCGCGCGGCTCG
TGTTGCTGAGAAGGAGGCGGAGAAGGAGGCGGAGAAAAAGGCCGAGGAAG
CCGAGGAAGCCAAGGAAGAGAGTGAGGCCAAGGAGGAGGATAAGCAAGAG
GTCCAGTCCCCGCGCCAGACCTTGCAGGCTATGCTGTCGCAGGCCAAGAA
CATCATGGCCGACAGCAAGTCGGTGCTTCCCGCCAAGCGGAAGCAGGAGC
TGCGTGGATTCCAGAAGGCCGTCCGTCGCGTGCTGTCTCGCTCTGATTCA
AACGTCCTCGCCGACAACCTGGAGGCTCAATTTTCCGAGCTGACTTTGCT
GCTCAAGGCCAAGAAGGCAGAGAAGACGAAGAAGTCGGGCAACAAGGAAA
GACAGGATACCACATCTGCCAACTCCGAGAAGTCCACCGATACCAAGGCT
GCTACTGAGGTAGACAGCGAGACTCAGCCCGGCGATAAGCTGTCCGAGGC
ATTCCGCCAGGCTGCTGAGAACCCCGAACAGGAGGTGGATACGTCCGAGT
TGACCGATGAGGAGTTCAAGATTCTTCGTCGTGCCCTTATCCAGATGCGT
GATAACCCGATCGATCATTCGAAGCCGTACGCTACGCCCTGGCGGCCGCG
GGACTTCATGAGCGCCTTTGCCACGATCCCTCGCTACCTGGAAGTGAACC
CTAAGGCTTGTGCGGCCGTCTACCTGCGCCACCCCGTTGTTCGTCCGGGC
TTGTCGGAGGTTCCATCGCCCTTCAACCTTGCGACTGGAGCGCTGGCATA
CCACTGGTACCTGAGACGGCGGTAGATGCATGAGAAATGCTTGTACTAAT
TAGTTGCCCCCATCTGTTTTTGTTCTTTGGGTTTATCTTCGCTGTTCTGC
GGGCATGTTCCACAGTCTTATTGTATTACTGGGTCGCTGGTTTGGTTTTT
TCTTAGATCTTCTCTGCATTGTCGGTGTGCTCACCGTGTATCTCTATATC
TATCTGTCTGGTCCTCTGTTGAAAGGCGAGGGTCAATGTCATGTTGCAGC
GGTGTTGGAGCTGGATGAGCACAAATGTAAATCACCAATGAAATATATCC
TCAC
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Coding sequence (CDS) from alignment at ch4:2233407..2235360-

>KJC3_005295-T1 ID=KJC3_005295-T1|Name=KJC3_005295-T1|organism=Aspergillus niger KJC3|type=CDS|length=4194bp|location=Sequence derived from alignment at ch4:2233407..2235360- (Aspergillus niger KJC3)
ATGAGATACCCCGGTTACCTGCTCAACCCTGGTGATCTTTTCCAGGTCGA
ACCCGAGCGTGTCATGTTTGCCACCGGTGCTCCAAAGGACAAGTACGACC
GGCGCGCGGCTCGTGTTGCTGAGAAGGAGGCGGAGAAGGAGGCGGAGAAA
AAGGCCGAGGAAGCCGAGGAAGCCAAGGAAGAGAGTGAGGCCAAGGAGGA
GGATAAGCAAGAGGTCCAGTCCCCGCGCCAGACCTTGCAGGCTATGCTGT
CGCAGGCCAAGAACATCATGGCCGACAGCAAGTCGGTGCTTCCCGCCAAG
CGGAAGCAGGAGCTGCGTGGATTCCAGAAGGCCGTCCGTCGCGTGCTGTC
TCGCTCTGATTCAAACGTCCTCGCCGACAACCTGGAGGCTCAATTTTCCG
AGCTGACTTTGCTGCTCAAGGCCAAGAAGGCAGAGAAGACGAAGAAGTCG
GGCAACAAGGAAAGACAGGATACCACATCTGCCAACTCCGAGAAGTCCAC
CGATACCAAGGCTGCTACTGAGGTAGACAGCGAGACTCAGCCCGGCGATA
AGCTGTCCGAGGCATTCCGCCAGGCTGCTGAGAACCCCGAACAGGAGGTG
GATACGTCCGAGTTGACCGATGAGGAGTTCAAGATTCTTCGTCGTGCCCT
TATCCAGATGCGTGATAACCCGATCGATCATTCGAAGCCGTACGCTACGC
CCTGGCGGCCGCGGGACTTCATGAGCGCCTTTGCCACGATCCCTCGCTAC
CTGGAAGTGAACCCTAAGGCTTGTGCGGCCGTCTACCTGCGCCACCCCGT
TGTTCGTCCGGGCTTGTCGGAGGTTCCATCGCCCTTCAACCTTGCGACTG
GAGCGCTGGCATACCACTGGTACCTGAGACGGCGGTAGAAAGTCCGGCAA
TCATGGAGCAAATGGAACCTATATAACATGAAGCGGTTCTCCGTCAAGAA
CCCCATGTTCCGAACTCATTTCCAGCAAAAATGGGATGCCAAGTCGATAG
CCCGTGGATATCATGGCGAACAAGTCTCCGAGAAGCACTGGGTGCGCATG
TTTTCTCCCCGCATTCGTAGCGTGGTGCCCATGGATCCCGCCAAACTGGC
CAAAGACGATGGTTCTGCCTTGTCTGCCGGCCGTGGTATGGGTGTTGAGT
CGCGTTCTGACACAGCCGCGCATCTTAAACTCTCAAAATACGAGAAAGCC
GACGCCGACCAACTGGAAAGGCCTTTTCCCTATACACAGGCGACTTTTGC
TCCCCTAGAGCGCCGGCTGGATGTGGCCGTCTTCCGGGCTATGTTCGCTA
GCAGTACGAGGCAGGCGCGGCAATTTGTCATTCATGGAGCGGTCACTGTC
AATGGAAAGAAGATGAGGAACAGGGCGACCCAGCATCTGAGCAAGCCGAT
GAGATACCCCGGTTACCTGCTCAACCCTGGTGATCTTTTCCAGGTCGAAC
CCGAGCGTGTCATGTTTGCCACCGGTGCTCCAAAGGACAAGTACGACCGG
CGCGCGGCTCGTGTTGCTGAGAAGGAGGCGGAGAAGGAGGCGGAGAAAAA
GGCCGAGGAAGCCGAGGAAGCCAAGGAAGAGAGTGAGGCCAAGGAGGAGG
ATAAGCAAGAGGTCCAGTCCCCGCGCCAGACCTTGCAGGCTATGCTGTCG
CAGGCCAAGAACATCATGGCCGACAGCAAGTCGGTGCTTCCCGCCAAGCG
GAAGCAGGAGCTGCGTGGATTCCAGAAGGCCGTCCGTCGCGTGCTGTCTC
GCTCTGATTCAAACGTCCTCGCCGACAACCTGGAGGCTCAATTTTCCGAG
CTGACTTTGCTGCTCAAGGCCAAGAAGGCAGAGAAGACGAAGAAGTCGGG
CAACAAGGAAAGACAGGATACCACATCTGCCAACTCCGAGAAGTCCACCG
ATACCAAGGCTGCTACTGAGGTAGACAGCGAGACTCAGCCCGGCGATAAG
CTGTCCGAGGCATTCCGCCAGGCTGCTGAGAACCCCGAACAGGAGGTGGA
TACGTCCGAGTTGACCGATGAGGAGTTCAAGATTCTTCGTCGTGCCCTTA
TCCAGATGCGTGATAACCCGATCGATCATTCGAAGCCGTACGCTACGCCC
TGGCGGCCGCGGGACTTCATGAGCGCCTTTGCCACGATCCCTCGCTACCT
GGAAGTGAACCCTAAGGCTTGTGCGGCCGTCTACCTGCGCCACCCCGTTG
TTCGTCCGGGCTTGTCGGAGGTTCCATCGCCCTTCAACCTTGCGACTGGA
GCGCTGGCATACCACTGGTACCTGAGACGGCGGTAGAAAGTCCGGCAATC
ATGGAGCAAATGGAACCTATATAACATGAAGCGGTTCTCCGTCAAGAACC
CCATGTTCCGAACTCATTTCCAGCAAAAATGGGATGCCAAGTCGATAGCC
CGTGGATATCATGGCGAACAAGTCTCCGAGAAGCACTGGGTGCGCATGTT
TTCTCCCCGCATTCGTAGCGTGGTGCCCATGGATCCCGCCAAACTGGCCA
AAGACGATGGTTCTGCCTTGTCTGCCGGCCGTGGTATGGGTGTTGAGTCG
CGTTCTGACACAGCCGCGCATCTTAAACTCTCAAAATACGAGAAAGCCGA
CGCCGACCAACTGGAAAGGCCTTTTCCCTATACACAGGCGACTTTTGCTC
CCCTAGAGCGCCGGCTGGATGTGGCCGTCTTCCGGGCTATGTTCGCTAGC
AGTACGAGGCAGGCGCGGCAATTTGTCATTCATGGAGCGGTCACTGTCAA
TGGAAAGAAGATGAGGAACAGGGCGACCCAGCATCTGAGCAAGCCGATGA
GATACCCCGGTTACCTGCTCAACCCTGGTGATCTTTTCCAGGTCGAACCC
GAGCGTGTCATGTTTGCCACCGGTGCTCCAAAGGACAAGTACGACCGGCG
CGCGGCTCGTGTTGCTGAGAAGGAGGCGGAGAAGGAGGCGGAGAAAAAGG
CCGAGGAAGCCGAGGAAGCCAAGGAAGAGAGTGAGGCCAAGGAGGAGGAT
AAGCAAGAGGTCCAGTCCCCGCGCCAGACCTTGCAGGCTATGCTGTCGCA
GGCCAAGAACATCATGGCCGACAGCAAGTCGGTGCTTCCCGCCAAGCGGA
AGCAGGAGCTGCGTGGATTCCAGAAGGCCGTCCGTCGCGTGCTGTCTCGC
TCTGATTCAAACGTCCTCGCCGACAACCTGGAGGCTCAATTTTCCGAGCT
GACTTTGCTGCTCAAGGCCAAGAAGGCAGAGAAGACGAAGAAGTCGGGCA
ACAAGGAAAGACAGGATACCACATCTGCCAACTCCGAGAAGTCCACCGAT
ACCAAGGCTGCTACTGAGGTAGACAGCGAGACTCAGCCCGGCGATAAGCT
GTCCGAGGCATTCCGCCAGGCTGCTGAGAACCCCGAACAGGAGGTGGATA
CGTCCGAGTTGACCGATGAGGAGTTCAAGATTCTTCGTCGTGCCCTTATC
CAGATGCGTGATAACCCGATCGATCATTCGAAGCCGTACGCTACGCCCTG
GCGGCCGCGGGACTTCATGAGCGCCTTTGCCACGATCCCTCGCTACCTGG
AAGTGAACCCTAAGGCTTGTGCGGCCGTCTACCTGCGCCACCCCGTTGTT
CGTCCGGGCTTGTCGGAGGTTCCATCGCCCTTCAACCTTGCGACTGGAGC
GCTGGCATACCACTGGTACCTGAGACGGCGGTAGAAAGTCCGGCAATCAT
GGAGCAAATGGAACCTATATAACATGAAGCGGTTCTCCGTCAAGAACCCC
ATGTTCCGAACTCATTTCCAGCAAAAATGGGATGCCAAGTCGATAGCCCG
TGGATATCATGGCGAACAAGTCTCCGAGAAGCACTGGGTGCGCATGTTTT
CTCCCCGCATTCGTAGCGTGGTGCCCATGGATCCCGCCAAACTGGCCAAA
GACGATGGTTCTGCCTTGTCTGCCGGCCGTGGTATGGGTGTTGAGTCGCG
TTCTGACACAGCCGCGCATCTTAAACTCTCAAAATACGAGAAAGCCGACG
CCGACCAACTGGAAAGGCCTTTTCCCTATACACAGGCGACTTTTGCTCCC
CTAGAGCGCCGGCTGGATGTGGCCGTCTTCCGGGCTATGTTCGCTAGCAG
TACGAGGCAGGCGCGGCAATTTGTCATTCATGGAGCGGTCACTGTCAATG
GAAAGAAGATGAGGAACAGGGCGACCCAGCATCTGAGCAAGCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0019843rRNA binding
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005295KJC3_005295Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005295-T1KJC3_005295-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005295-T1.cdsKJC3_005295-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005295-T1.utr3p1KJC3_005295-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005295-T1.exon3KJC3_005295-T1.exon3Aspergillus niger KJC3exon
KJC3_005295-T1.exon2KJC3_005295-T1.exon2Aspergillus niger KJC3exon
KJC3_005295-T1.exon1KJC3_005295-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005295-T1.utr5p1KJC3_005295-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092651FJ
DBxrefInterPro:IPR018079
DBxrefInterPro:IPR036986
DBxrefInterPro:IPR002942
DBxrefPFAM:PF01479
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2233407..2235360 -
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