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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2255389..2257395+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005303-T1 ID=KJC3_005303-T1|Name=KJC3_005303-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2007bp|location=Sequence derived from alignment at ch4:2255389..2257395+ (Aspergillus niger KJC3)
TCTTGACCAAGACGGCGCAGCTAATACCTGCCAGATTGAGTATCTGTATT
GAAGAATGCCGTGACCGGACACATCCGCCATCCTCAGTTTTCCCTCTCAT
CGTCAAACTGCCCCTCCTCCACCCGCAACCCCGCCATAAAAGACTTCTCC
CCCGCAAGAACCACTACCCAAGGCAATGGACGTAGAGGAGATTCTCCGTG
GCATCAAGCCCCTCGAGGGCCAAGTCACCGCAATTCGGACCGTTCAGGAA
ACGCGTCCCCGCGAAGACTACGGTGCGTCATCCTTGGAACTTCTCCACAA
GGACCTTAACGCATCTAACAATCCCCAGCCGATGCCTACATCACCGAAGT
CAACGTCAAATGTGCCTCGAAAGTGATCAAGTGAGCTCACCCCCGAACAC
ATACTATCTTCTTCTCCGCTCACCTTCTCTTCTCCAACAACCAGAGTCCT
GGACTCCCGCTTCCCCCGCGACTCCTCCCAACCACTAAGCCACCTCCGCC
GCTTCGCAAAACACAACCAACTCCCCGAACACCTCCGTCCCATCCTCCTC
CACGAGGGATCCTCCCCCGCGCAAACTATCTTCGTGCTAGTCTCCCCGCC
TCTCCCTGACCTTGAATCCCTCCAAGATGCTCTATCGCCATTCGCACCCC
CAACCCCTGCTGGGGAGGAGAACAGCAACAACCCCCTTACCTTCCACACC
ATCCGCATCCCCCTCCAACCCCCCCTCACCCCCGTCCAAGCCGACGCATG
GTCCAAAAGCATGTGGCCAGTCGTCTACAACCCCGCCGCGCCCCGCGCCA
TGATCGCCCCGCCACCACACATCCTAGCCCGCGCGCGCGACTCTATCCAG
CCCAAAGCAGGCCGGTACCTCGCTCTAGCGCAAAGAGTCGCGGACGAGGC
CGAACGATCAGGACTAGGCCGGCGTGTCGGCGCCGTCGTCGTGGATCCAG
ACCTTGAAGCAACGATCGCCGAGCAAGCCGCAACCGACGACAATGACAAT
GACAACGACAATGGAATCCACTGGTCCGACGCAGTCGTCGCAGTAGCCGG
CGACGGACGATACTCCCGCGCAGACACGGGCACAGAACCCCCAAACCCTC
CCAACCAATACGCAACAACCTACTCCCCCGACCACGAAGGCGGACCCGAA
CTCCACGCCCTAATGCGCGCCGTGGAACTCATCGCCAGTAAACGTCGCGA
AGACCGTCCCGGCTCATCAGCTACAAACCGGCCCTGTCTTACAGACGTGG
AGAGATACTTCCTGTCTAAATCAGACACCGACATTACTGCTGCACAGCCA
ACCGAACCCGAGCCCGAATCAAAAGAGTCTACTCCAGTCCCGCCACCGGA
AAAATACCAAAAAACTACAGAAACCACCGCACATCCCATCCATACCTCCA
CATCTACAGGCACATCCACATCGCGCATCCGCCCCCGCTCCCAAGGCGGA
TACCTCTGCACGGACCTAGACGTATACCTGACCCACGAGCCATGCATCTG
CTGTAGCATGGGTCTGCTGCTCTCGCGCTTCCGGGCTGTGGTGTTCCCTC
GTTCGGGGAGGATGGTGTCGGGTGGATTGGCGTCGGAGCCGGTGGTTAGG
CCTGTACCTGCTGAGGAAGATGAGAATGAAAATGAGAATGAGAATGAGAA
TGGGATTGGAGCTGAAAAGACGGATGATGATGGATCGGTGGAAAGGGAGT
ATTATGGGTTGCATTGGCGGAAGGAGTTGAATTGGCGGGCGTTGGGGTTT
GAGTTTGTGGAAGAGCTGGAGAATGAAGAGGGGAGTGCTGAGTTGGGGGT
GGCGTTTCATGCTTGATGATATTGTAGTATGATAGGTATGGGTATAAGTA
TAGATGCATAGGGTATAGGCGTCTTAAAAGGGGCGTTGTGTGGGTGGGTG
TAGTATTACTCTTATCGTAACCCTTTCGAGTCGTGATTGAATGAACACAA
AAGTATATGCACGAAGGCTCTACATCTACGAAAAAACAGCACCAAAAGCT
GACCTCG back to topCoding sequence (CDS) from alignment at ch4:2255389..2257395+ >KJC3_005303-T1 ID=KJC3_005303-T1|Name=KJC3_005303-T1|organism=Aspergillus niger KJC3|type=CDS|length=4563bp|location=Sequence derived from alignment at ch4:2255389..2257395+ (Aspergillus niger KJC3)
ATGGACGTAGAGGAGATTCTCCGTGGCATCAAGCCCCTCGAGGGCCAAGT
CACCGCAATTCGGACCGTTCAGGAAACGCGTCCCCGCGAAGACTACGCCG
ATGCCTACATCACCGAAGTCAACGTCAAATGTGCCTCGAAAGTGATCAAA
GTCCTGGACTCCCGCTTCCCCCGCGACTCCTCCCAACCACTAAGCCACCT
CCGCCGCTTCGCAAAACACAACCAACTCCCCGAACACCTCCGTCCCATCC
TCCTCCACGAGGGATCCTCCCCCGCGCAAACTATCTTCGTGCTAGTCTCC
CCGCCTCTCCCTGACCTTGAATCCCTCCAAGATGCTCTATCGCCATTCGC
ACCCCCAACCCCTGCTGGGGAGGAGAACAGCAACAACCCCCTTACCTTCC
ACACCATCCGCATCCCCCTCCAACCCCCCCTCACCCCCGTCCAAGCCGAC
GCATGGTCCAAAAGCATGTGGCCAGTCGTCTACAACCCCGCCGCGCCCCG
CGCCATGATCGCCCCGCCACCACACATCCTAGCCCGCGCGCGCGACTCTA
TCCAGCCCAAAGCAGGCCGGTACCTCGCTCTAGCGCAAAGAGTCGCGGAC
GAGGCCGAACGATCAGGACTAGGCCGGCGTGTCGGCGCCGTCGTCGTGGA
TCCAGACCTTGAAGCAACGATCGCCGAGCAAGCCGCAACCGACGACAATG
ACAATGACAACGACAATGGAATCCACTGGTCCGACGCAGTCGTCGCAGTA
GCCGGCGACGGACGATACTCCCGCGCAGACACGGGCACAGAACCCCCAAA
CCCTCCCAACCAATACGCAACAACCTACTCCCCCGACCACGAAGGCGGAC
CCGAACTCCACGCCCTAATGCGCGCCGTGGAACTCATCGCCAGTAAACGT
CGCGAAGACCGTCCCGGCTCATCAGCTACAAACCGGCCCTGTCTTACAGA
CGTGGAGAGATACTTCCTGTCTAAATCAGACACCGACATTACTGCTGCAC
AGCCAACCGAACCCGAGCCCGAATCAAAAGAGTCTACTCCAGTCCCGCCA
CCGGAAAAATACCAAAAAACTACAGAAACCACCGCACATCCCATCCATAC
CTCCACATCTACAGGCACATCCACATCGCGCATCCGCCCCCGCTCCCAAG
GCGGATACCTCTGCACGGACCTAGACGTATACCTGACCCACGAGCCATGC
ATCTGCTGTAGCATGGGTCTGCTGCTCTCGCGCTTCCGGGCTGTGGTGTT
CCCTCGTTCGGGGAGGATGGTGTCGGGTGGATTGGCGTCGGAGCCGGTGG
TTAGGCCTGTACCTGCTGAGGAAGATGAGAATGAAAATGAGAATGAGAAT
GAGAATGGGATTGGAGCTGAAAAGACGGATGATGATGGATCGGTGGAAAG
GGAGTATTATGGGTTGCATTGGCGGAAGGAGTTGAATTGGCGGGCGTTGG
GGTTTGAGTTTGTGGAAGAGCTGGAGAATGAAGAGGGGAGTGCTGAGTTG
GGGGTGGCGTTTCATGCTTGAATGGACGTAGAGGAGATTCTCCGTGGCAT
CAAGCCCCTCGAGGGCCAAGTCACCGCAATTCGGACCGTTCAGGAAACGC
GTCCCCGCGAAGACTACGCCGATGCCTACATCACCGAAGTCAACGTCAAA
TGTGCCTCGAAAGTGATCAAAGTCCTGGACTCCCGCTTCCCCCGCGACTC
CTCCCAACCACTAAGCCACCTCCGCCGCTTCGCAAAACACAACCAACTCC
CCGAACACCTCCGTCCCATCCTCCTCCACGAGGGATCCTCCCCCGCGCAA
ACTATCTTCGTGCTAGTCTCCCCGCCTCTCCCTGACCTTGAATCCCTCCA
AGATGCTCTATCGCCATTCGCACCCCCAACCCCTGCTGGGGAGGAGAACA
GCAACAACCCCCTTACCTTCCACACCATCCGCATCCCCCTCCAACCCCCC
CTCACCCCCGTCCAAGCCGACGCATGGTCCAAAAGCATGTGGCCAGTCGT
CTACAACCCCGCCGCGCCCCGCGCCATGATCGCCCCGCCACCACACATCC
TAGCCCGCGCGCGCGACTCTATCCAGCCCAAAGCAGGCCGGTACCTCGCT
CTAGCGCAAAGAGTCGCGGACGAGGCCGAACGATCAGGACTAGGCCGGCG
TGTCGGCGCCGTCGTCGTGGATCCAGACCTTGAAGCAACGATCGCCGAGC
AAGCCGCAACCGACGACAATGACAATGACAACGACAATGGAATCCACTGG
TCCGACGCAGTCGTCGCAGTAGCCGGCGACGGACGATACTCCCGCGCAGA
CACGGGCACAGAACCCCCAAACCCTCCCAACCAATACGCAACAACCTACT
CCCCCGACCACGAAGGCGGACCCGAACTCCACGCCCTAATGCGCGCCGTG
GAACTCATCGCCAGTAAACGTCGCGAAGACCGTCCCGGCTCATCAGCTAC
AAACCGGCCCTGTCTTACAGACGTGGAGAGATACTTCCTGTCTAAATCAG
ACACCGACATTACTGCTGCACAGCCAACCGAACCCGAGCCCGAATCAAAA
GAGTCTACTCCAGTCCCGCCACCGGAAAAATACCAAAAAACTACAGAAAC
CACCGCACATCCCATCCATACCTCCACATCTACAGGCACATCCACATCGC
GCATCCGCCCCCGCTCCCAAGGCGGATACCTCTGCACGGACCTAGACGTA
TACCTGACCCACGAGCCATGCATCTGCTGTAGCATGGGTCTGCTGCTCTC
GCGCTTCCGGGCTGTGGTGTTCCCTCGTTCGGGGAGGATGGTGTCGGGTG
GATTGGCGTCGGAGCCGGTGGTTAGGCCTGTACCTGCTGAGGAAGATGAG
AATGAAAATGAGAATGAGAATGAGAATGGGATTGGAGCTGAAAAGACGGA
TGATGATGGATCGGTGGAAAGGGAGTATTATGGGTTGCATTGGCGGAAGG
AGTTGAATTGGCGGGCGTTGGGGTTTGAGTTTGTGGAAGAGCTGGAGAAT
GAAGAGGGGAGTGCTGAGTTGGGGGTGGCGTTTCATGCTTGAATGGACGT
AGAGGAGATTCTCCGTGGCATCAAGCCCCTCGAGGGCCAAGTCACCGCAA
TTCGGACCGTTCAGGAAACGCGTCCCCGCGAAGACTACGCCGATGCCTAC
ATCACCGAAGTCAACGTCAAATGTGCCTCGAAAGTGATCAAAGTCCTGGA
CTCCCGCTTCCCCCGCGACTCCTCCCAACCACTAAGCCACCTCCGCCGCT
TCGCAAAACACAACCAACTCCCCGAACACCTCCGTCCCATCCTCCTCCAC
GAGGGATCCTCCCCCGCGCAAACTATCTTCGTGCTAGTCTCCCCGCCTCT
CCCTGACCTTGAATCCCTCCAAGATGCTCTATCGCCATTCGCACCCCCAA
CCCCTGCTGGGGAGGAGAACAGCAACAACCCCCTTACCTTCCACACCATC
CGCATCCCCCTCCAACCCCCCCTCACCCCCGTCCAAGCCGACGCATGGTC
CAAAAGCATGTGGCCAGTCGTCTACAACCCCGCCGCGCCCCGCGCCATGA
TCGCCCCGCCACCACACATCCTAGCCCGCGCGCGCGACTCTATCCAGCCC
AAAGCAGGCCGGTACCTCGCTCTAGCGCAAAGAGTCGCGGACGAGGCCGA
ACGATCAGGACTAGGCCGGCGTGTCGGCGCCGTCGTCGTGGATCCAGACC
TTGAAGCAACGATCGCCGAGCAAGCCGCAACCGACGACAATGACAATGAC
AACGACAATGGAATCCACTGGTCCGACGCAGTCGTCGCAGTAGCCGGCGA
CGGACGATACTCCCGCGCAGACACGGGCACAGAACCCCCAAACCCTCCCA
ACCAATACGCAACAACCTACTCCCCCGACCACGAAGGCGGACCCGAACTC
CACGCCCTAATGCGCGCCGTGGAACTCATCGCCAGTAAACGTCGCGAAGA
CCGTCCCGGCTCATCAGCTACAAACCGGCCCTGTCTTACAGACGTGGAGA
GATACTTCCTGTCTAAATCAGACACCGACATTACTGCTGCACAGCCAACC
GAACCCGAGCCCGAATCAAAAGAGTCTACTCCAGTCCCGCCACCGGAAAA
ATACCAAAAAACTACAGAAACCACCGCACATCCCATCCATACCTCCACAT
CTACAGGCACATCCACATCGCGCATCCGCCCCCGCTCCCAAGGCGGATAC
CTCTGCACGGACCTAGACGTATACCTGACCCACGAGCCATGCATCTGCTG
TAGCATGGGTCTGCTGCTCTCGCGCTTCCGGGCTGTGGTGTTCCCTCGTT
CGGGGAGGATGGTGTCGGGTGGATTGGCGTCGGAGCCGGTGGTTAGGCCT
GTACCTGCTGAGGAAGATGAGAATGAAAATGAGAATGAGAATGAGAATGG
GATTGGAGCTGAAAAGACGGATGATGATGGATCGGTGGAAAGGGAGTATT
ATGGGTTGCATTGGCGGAAGGAGTTGAATTGGCGGGCGTTGGGGTTTGAG
TTTGTGGAAGAGCTGGAGAATGAAGAGGGGAGTGCTGAGTTGGGGGTGGC
GTTTCATGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005303-T1.utr5p1 | KJC3_005303-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005303-T1.utr3p1 | KJC3_005303-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016193 |
| DBxref | InterPro:IPR002125 |
| DBxref | PFAM:PF00383 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2255389..2257395 + |
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