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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2273034..2276093+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005309-T1 ID=KJC3_005309-T1|Name=KJC3_005309-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3060bp|location=Sequence derived from alignment at ch4:2273034..2276093+ (Aspergillus niger KJC3)
TCTGCTACTTTTTACGGTAGGGGAAGCTTCAGGGTTCTGGTGCTTCTCCT
CTCCTGGTGCTGCCCTTGGGGCTTCTGTAGCCCTTCTCTTGACTTTTCAT
TGTTCAGATTTTTTCTTGCTCAACCACAATCCCCCACCTGCCTCAGTCGG
AGGCTGTACCGCGACTCTAGTCATATCTCCGCATTTTCCTTCCATAACTG
CTTTTTTTGCCCCCGCCATACGAAGGTACTTTCACGCCTTTACCTTAAAA
GGCAGAGTGAATAATGTCGGGCAATCCTAGTCAGATTCCTACCACATCTA
TGAAAGCGGTGAACATTCCGAGTCAGCCAGCCTCTGCGACATTTACTCCA
TCGTCATTCGATAGCGGCTCTCCGCGGTCTCAGCGGCGCCCGGGAGGCTC
TGGCAGCTTTGGAGCTGGGTTGACATCTCAGGCTAGAAACTCAGGCTCTC
CTAGGCACAATCAAGCTCTCAGGAGTCAGCATAAACGACAGAGGCGTCCT
CGATTGCTAGATGATGAGGATTATAGCGAATCGGTACGTGTCTCGAATTC
TAGGGAGTGGCTACAGCTACATCACGCTCACTCGAGCCTCACTCGAGCCA
CACTATCCTGCCATACTTCCCGCCCTTGTATTATCCCCACCTGATGCTCT
TTGTGATTCCGTATGCGTAAAGCCTTGGGAAGCTTCCTTGAGATCCCCTG
GACATCATATACGCGAAGGGGCTTACATAAGATGCTGAAGGAGGGGCCTG
CGCATACAAGATAATCTGGGGGTTGTAGCAGAAGTGCGAACAATGTGGCT
GGAGTCACTCACTAGGACTATCGCTATTGCTTTGCTATCCTTGTTTACTG
ACTCGTCCGTCTCCCCAGGCCATCATGAGATCCACGACCAGTCGCAAGGG
ACAGACGTCCATCACTCATCTGATGAACTTCTCCCTTCCCCCTCGTCCTC
AGTACCATCCTCCACCCCGTAATACTCGCCGCTATACGTCCTGGGGTCCA
GGTTCCGGCTACCATGCCATGGACAAATCCCGCTACGTTCATGCCAACTA
TCGCTTTATTGTGACGCCAAATCGCAACTACCATGCACAAGCGGCCAATG
CTGATGTCCATCTTGACTGGGATTCAGTGATGCAGGTCTTGGTATCAGAG
CAGACACAGTCAGCTAGCTGCCCCATCTGTTTGTCCACACCGGTAGCGCC
ACGCATGGCTCGTTGTGGTCATATATTCTGCCTTCCTTGTTTGATTCGCT
ACATGCATTCGACTGACGAGGAAAAACCGGTTCCTGAGAAGAAGCCACGA
TGGAAAAAGTGCCCCATCTGTTGGGACTCTGTGTACATTTCGGAAACTCG
GCCTGTGCGATGGTTTCGTGGCCAAGAAGGGGACCTCCCATTCGAGGGGG
GTGATGTCGTGCTAAGGCTAGTGAAAAGAGAGCCCGGAAGCACGTTAGCA
CTCCCACGGGATGGAGCTGAGGGAATAGCACCAGATGAGGATGTTCCGTG
GTATCATGCTGCAGAAGTGGCTGATTACGCGCGCATAATGAAAGGAGGTG
AAGATTATATGAAAGAACAATACGACATTGAGATTGATGAGCTCCGCAGG
CAGGAGCTTGAGGATGAGCTTTTATTTGGAGATGATACTACTTGGACACG
GAAGGCGGTTGCAGCAATTGCAGATGCCAAATCCAAGGTAGAGGGTATAG
GGAACCCACCCGAGATTGTGCGACTGCCCGTCCCAAGCCAAGAGCCAAAG
GAACCTGTCGCCGCACACTCACCACCAGAGGAAATTGCTGCCATGTATGC
ATCGCAGCATGCAATCAAGTCAGGCCAAAGTTCGTCTGCGGAGTCTATCC
CCGCGTCAGATACTGGGCCTGGTTCGGCCTCCACTCCGGAGACGTCCAAT
GATGTGGATCGTACAGCCGAAGCTTTGGGCCAGGTTGACCTGAATACAAC
CTCTGCCCCGAAAAAGAAAAAGAGAGATCCTGGACACGGCCGAAATAATA
TGCCCTCAAAGCGAGGTCCTACTACATCTGACCATGCGTTCTTCTTCTAC
CAAGCTCTACCCCAATTCTACCTTTCGCCCTTGGACATCCGCATCTTGAA
AGCTGCATTTGGCGATTACTCTTCATTCCCGGCCACCATTCTCCCTAGGG
TTGAGCGTATTTCGAGCGGTCATATTGTGGACGACGAGCTACGCAAACGA
GTCAAGTATCTCAGCCACCTGCCGCAAGGTTGTGAGGTGAACTTTCTCGA
GTGTGACTGGAGAGACGTAGTTGTGCCGGAGGTGCTAGAAAATTTCAAGT
CGGAAACTGAAAAGAGACGGAAGCGCAATAAGGAGAAAGAGGTGCGAGAA
GAGAAGGATCGCATCCGAGCGGAGAAAGAAGAGGATGAAAAGCGCTGGGC
AGCGGCGCGCCGGAAGAGGCCTAGCATTGGCCCCGTCGATGAACCTCCCT
TCTCCGACCGCGATTTTCAGCCGTTATCGGGCTCTGCTGGCGAGCCTTCT
GGCTTCGATATAGGCTCTTCCTCTGCATCCCCTCCGCCCTCCTCGAGTCC
CCCCGGATCTCGTACGGTGTGGGGAACAGTTGCCGCTCCGACACTTTCGG
CTCCGTCGAGCTCACAAGCCCCTGCCGATGGTTGGCTGCAGGGCTGGGAG
GAGGAGCTGTGGGCCCAGCAAGAAAGGGAGCTCTTGGCTCAATCTGCTGC
TGAGGCGAACACTCCAGCTTCTTCCTCTGGCGGGAAAAAGAAGAAGAATA
AGAAAATTACACTCATGTCGACCAATATCCAAAGAGGGGCATAGAAGGTG
CAACTATCTGTGCGTTCTTCGTCCACCAGCTTCTGGTGATCCACTTTGTC
GTTTACAATCTTTTCTATACGGTATTTGTGGATTTTTCTCTACTTTATCA
CGAATATTATGTTATAATCATGTGTGGGGGGTTGTTTGCAGATACATTCT
GGGAAGAGCATAGGTCAGGAGTCGAGAGTGTTTTTATGGAAATTTGATGG
CTACATATGTGTACCAATTACAACAACTAGATAAAAATGATAAAGCAGCT
AAGATTAGAG back to topCoding sequence (CDS) from alignment at ch4:2273034..2276093+ >KJC3_005309-T1 ID=KJC3_005309-T1|Name=KJC3_005309-T1|organism=Aspergillus niger KJC3|type=CDS|length=4320bp|location=Sequence derived from alignment at ch4:2273034..2276093+ (Aspergillus niger KJC3)
ATGAAAGCGGTGAACATTCCGAGTCAGCCAGCCTCTGCGACATTTACTCC
ATCGTCATTCGATAGCGGCTCTCCGCGGTCTCAGCGGCGCCCGGGAGGCT
CTGGCAGCTTTGGAGCTGGGTTGACATCTCAGGCTAGAAACTCAGGCTCT
CCTAGGCACAATCAAGCTCTCAGGAGTCAGCATAAACGACAGAGGCGTCC
TCGATTGCTAGATGATGAGGATTATAGCGAATCGGCCATCATGAGATCCA
CGACCAGTCGCAAGGGACAGACGTCCATCACTCATCTGATGAACTTCTCC
CTTCCCCCTCGTCCTCAGTACCATCCTCCACCCCGTAATACTCGCCGCTA
TACGTCCTGGGGTCCAGGTTCCGGCTACCATGCCATGGACAAATCCCGCT
ACGTTCATGCCAACTATCGCTTTATTGTGACGCCAAATCGCAACTACCAT
GCACAAGCGGCCAATGCTGATGTCCATCTTGACTGGGATTCAGTGATGCA
GGTCTTGGTATCAGAGCAGACACAGTCAGCTAGCTGCCCCATCTGTTTGT
CCACACCGGTAGCGCCACGCATGGCTCGTTGTGGTCATATATTCTGCCTT
CCTTGTTTGATTCGCTACATGCATTCGACTGACGAGGAAAAACCGGTTCC
TGAGAAGAAGCCACGATGGAAAAAGTGCCCCATCTGTTGGGACTCTGTGT
ACATTTCGGAAACTCGGCCTGTGCGATGGTTTCGTGGCCAAGAAGGGGAC
CTCCCATTCGAGGGGGGTGATGTCGTGCTAAGGCTAGTGAAAAGAGAGCC
CGGAAGCACGTTAGCACTCCCACGGGATGGAGCTGAGGGAATAGCACCAG
ATGAGGATGTTCCGTGGTATCATGCTGCAGAAGTGGCTGATTACGCGCGC
ATAATGAAAGGAGGTGAAGATTATATGAAAGAACAATACGACATTGAGAT
TGATGAGCTCCGCAGGCAGGAGCTTGAGGATGAGCTTTTATTTGGAGATG
ATACTACTTGGACACGGAAGGCGGTTGCAGCAATTGCAGATGCCAAATCC
AAGGTAGAGGGTATAGGGAACCCACCCGAGATTGTGCGACTGCCCGTCCC
AAGCCAAGAGCCAAAGGAACCTGTCGCCGCACACTCACCACCAGAGGAAA
TTGCTGCCATGTATGCATCGCAGCATGCAATCAAGTCAGGCCAAAGTTCG
TCTGCGGAGTCTATCCCCGCGTCAGATACTGGGCCTGGTTCGGCCTCCAC
TCCGGAGACGTCCAATGATGTGGATCGTACAGCCGAAGCTTTGGGCCAGG
TTGACCTGAATACAACCTCTGCCCCGAAAAAGAAAAAGAGAGATCCTGGA
CACGGCCGAAATAATATGCCCTCAAAGCGAGGTCCTACTACATCTGACCA
TGCGTTCTTCTTCTACCAAGCTCTACCCCAATTCTACCTTTCGCCCTTGG
ACATCCGCATCTTGAAAGCTGCATTTGGCGATTACTCTTCATTCCCGGCC
ACCATTCTCCCTAGGGTTGAGCGTATTTCGAGCGGTCATATTGTGGACGA
CGAGCTACGCAAACGAGTCAAGTATCTCAGCCACCTGCCGCAAGGTTGTG
AGGTGAACTTTCTCGAGTGTGACTGGAGAGACGTAGTTGTGCCGGAGGTG
CTAGAAAATTTCAAGTCGGAAACTGAAAAGAGACGGAAGCGCAATAAGGA
GAAAGAGGTGCGAGAAGAGAAGGATCGCATCCGAGCGGAGAAAGAAGAGG
ATGAAAAGCGCTGGGCAGCGGCGCGCCGGAAGAGGCCTAGCATTGGCCCC
GTCGATGAACCTCCCTTCTCCGACCGCGATTTTCAGCCGTTATCGGGCTC
TGCTGGCGAGCCTTCTGGCTTCGATATAGGCTCTTCCTCTGCATCCCCTC
CGCCCTCCTCGAGTCCCCCCGGATCTCGTACGGTGTGGGGAACAGTTGCC
GCTCCGACACTTTCGGCTCCGTCGAGCTCACAAGCCCCTGCCGATGGTTG
GCTGCAGGGCTGGGAGGAGGAGCTGTGGGCCCAGCAAGAAAGGGAGCTCT
TGGCTCAATCTGCTGCTGAGGCGAACACTCCAGCTTCTTCCTCTGGCGGG
AAAAAGAAGAAGAATAAGAAAATTACACTCATGTCGACCAATATCCAAAG
AGGGGCATAGATGAAAGCGGTGAACATTCCGAGTCAGCCAGCCTCTGCGA
CATTTACTCCATCGTCATTCGATAGCGGCTCTCCGCGGTCTCAGCGGCGC
CCGGGAGGCTCTGGCAGCTTTGGAGCTGGGTTGACATCTCAGGCTAGAAA
CTCAGGCTCTCCTAGGCACAATCAAGCTCTCAGGAGTCAGCATAAACGAC
AGAGGCGTCCTCGATTGCTAGATGATGAGGATTATAGCGAATCGGCCATC
ATGAGATCCACGACCAGTCGCAAGGGACAGACGTCCATCACTCATCTGAT
GAACTTCTCCCTTCCCCCTCGTCCTCAGTACCATCCTCCACCCCGTAATA
CTCGCCGCTATACGTCCTGGGGTCCAGGTTCCGGCTACCATGCCATGGAC
AAATCCCGCTACGTTCATGCCAACTATCGCTTTATTGTGACGCCAAATCG
CAACTACCATGCACAAGCGGCCAATGCTGATGTCCATCTTGACTGGGATT
CAGTGATGCAGGTCTTGGTATCAGAGCAGACACAGTCAGCTAGCTGCCCC
ATCTGTTTGTCCACACCGGTAGCGCCACGCATGGCTCGTTGTGGTCATAT
ATTCTGCCTTCCTTGTTTGATTCGCTACATGCATTCGACTGACGAGGAAA
AACCGGTTCCTGAGAAGAAGCCACGATGGAAAAAGTGCCCCATCTGTTGG
GACTCTGTGTACATTTCGGAAACTCGGCCTGTGCGATGGTTTCGTGGCCA
AGAAGGGGACCTCCCATTCGAGGGGGGTGATGTCGTGCTAAGGCTAGTGA
AAAGAGAGCCCGGAAGCACGTTAGCACTCCCACGGGATGGAGCTGAGGGA
ATAGCACCAGATGAGGATGTTCCGTGGTATCATGCTGCAGAAGTGGCTGA
TTACGCGCGCATAATGAAAGGAGGTGAAGATTATATGAAAGAACAATACG
ACATTGAGATTGATGAGCTCCGCAGGCAGGAGCTTGAGGATGAGCTTTTA
TTTGGAGATGATACTACTTGGACACGGAAGGCGGTTGCAGCAATTGCAGA
TGCCAAATCCAAGGTAGAGGGTATAGGGAACCCACCCGAGATTGTGCGAC
TGCCCGTCCCAAGCCAAGAGCCAAAGGAACCTGTCGCCGCACACTCACCA
CCAGAGGAAATTGCTGCCATGTATGCATCGCAGCATGCAATCAAGTCAGG
CCAAAGTTCGTCTGCGGAGTCTATCCCCGCGTCAGATACTGGGCCTGGTT
CGGCCTCCACTCCGGAGACGTCCAATGATGTGGATCGTACAGCCGAAGCT
TTGGGCCAGGTTGACCTGAATACAACCTCTGCCCCGAAAAAGAAAAAGAG
AGATCCTGGACACGGCCGAAATAATATGCCCTCAAAGCGAGGTCCTACTA
CATCTGACCATGCGTTCTTCTTCTACCAAGCTCTACCCCAATTCTACCTT
TCGCCCTTGGACATCCGCATCTTGAAAGCTGCATTTGGCGATTACTCTTC
ATTCCCGGCCACCATTCTCCCTAGGGTTGAGCGTATTTCGAGCGGTCATA
TTGTGGACGACGAGCTACGCAAACGAGTCAAGTATCTCAGCCACCTGCCG
CAAGGTTGTGAGGTGAACTTTCTCGAGTGTGACTGGAGAGACGTAGTTGT
GCCGGAGGTGCTAGAAAATTTCAAGTCGGAAACTGAAAAGAGACGGAAGC
GCAATAAGGAGAAAGAGGTGCGAGAAGAGAAGGATCGCATCCGAGCGGAG
AAAGAAGAGGATGAAAAGCGCTGGGCAGCGGCGCGCCGGAAGAGGCCTAG
CATTGGCCCCGTCGATGAACCTCCCTTCTCCGACCGCGATTTTCAGCCGT
TATCGGGCTCTGCTGGCGAGCCTTCTGGCTTCGATATAGGCTCTTCCTCT
GCATCCCCTCCGCCCTCCTCGAGTCCCCCCGGATCTCGTACGGTGTGGGG
AACAGTTGCCGCTCCGACACTTTCGGCTCCGTCGAGCTCACAAGCCCCTG
CCGATGGTTGGCTGCAGGGCTGGGAGGAGGAGCTGTGGGCCCAGCAAGAA
AGGGAGCTCTTGGCTCAATCTGCTGCTGAGGCGAACACTCCAGCTTCTTC
CTCTGGCGGGAAAAAGAAGAAGAATAAGAAAATTACACTCATGTCGACCA
ATATCCAAAGAGGGGCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005309-T1.utr3p1 | KJC3_005309-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017907 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR018957 |
| DBxref | InterPro:IPR001841 |
| DBxref | PFAM:PF13445 |
| DBxref | PFAM:PF00097 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2273034..2276093 + |
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