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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2273034..2276093+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005309-T2 ID=KJC3_005309-T2|Name=KJC3_005309-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3060bp|location=Sequence derived from alignment at ch4:2273034..2276093+ (Aspergillus niger KJC3)
TCTGCTACTTTTTACGGTAGGGGAAGCTTCAGGGTTCTGGTGCTTCTCCT
CTCCTGGTGCTGCCCTTGGGGCTTCTGTAGCCCTTCTCTTGACTTTTCAT
TGTTCAGATTTTTTCTTGCTCAACCACAATCCCCCACCTGCCTCAGTCGG
AGGCTGTACCGCGACTCTAGTCATATCTCCGCATTTTCCTTCCATAACTG
CTTTTTTTGCCCCCGCCATACGAAGGTACTTTCACGCCTTTACCTTAAAA
GGCAGAGTGAATAATGTCGGGCAATCCTAGTCAGATTCCTACCACATCTA
TGAAAGCGGTGAACATTCCGAGTCAGCCAGCCTCTGCGACATTTACTCCA
TCGTCATTCGATAGCGGCTCTCCGCGGTCTCAGCGGCGCCCGGGAGGCTC
TGGCAGCTTTGGAGCTGGGTTGACATCTCAGGCTAGAAACTCAGGCTCTC
CTAGGCACAATCAAGCTCTCAGGAGTCAGCATAAACGACAGAGGCGTCCT
CGATTGCTAGATGATGAGGATTATAGCGAATCGGTACGTGTCTCGAATTC
TAGGGAGTGGCTACAGCTACATCACGCTCACTCGAGCCTCACTCGAGCCA
CACTATCCTGCCATACTTCCCGCCCTTGTATTATCCCCACCTGATGCTCT
TTGTGATTCCGTATGCGTAAAGCCTTGGGAAGCTTCCTTGAGATCCCCTG
GACATCATATACGCGAAGGGGCTTACATAAGATGCTGAAGGAGGGGCCTG
CGCATACAAGATAATCTGGGGGTTGTAGCAGAAGTGCGAACAATGTGGCT
GGAGTCACTCACTAGGACTATCGCTATTGCTTTGCTATCCTTGTTTACTG
ACTCGTCCGTCTCCCCAGGCCATCATGAGATCCACGACCAGTCGCAAGGG
ACAGACGTCCATCACTCATCTGATGAACTTCTCCCTTCCCCCTCGTCCTC
AGTACCATCCTCCACCCCGTAATACTCGCCGCTATACGTCCTGGGGTCCA
GGTTCCGGCTACCATGCCATGGACAAATCCCGCTACGTTCATGCCAACTA
TCGCTTTATTGTGACGCCAAATCGCAACTACCATGCACAAGCGGCCAATG
CTGATGTCCATCTTGACTGGGATTCAGTGATGCAGGTCTTGGTATCAGAG
CAGACACAGTCAGCTAGCTGCCCCATCTGTTTGTCCACACCGGTAGCGCC
ACGCATGGCTCGTTGTGGTCATATATTCTGCCTTCCTTGTTTGATTCGCT
ACATGCATTCGACTGACGAGGAAAAACCGGTTCCTGAGAAGAAGCCACGA
TGGAAAAAGTGCCCCATCTGTTGGGACTCTGTGTACATTTCGGAAACTCG
GCCTGTGCGATGGTTTCGTGGCCAAGAAGGGGACCTCCCATTCGAGGGGG
GTGATGTCGTGCTAAGGCTAGTGAAAAGAGAGCCCGGAAGCACGTTAGCA
CTCCCACGGGATGGAGCTGAGGGAATAGCACCAGATGAGGATGTTCCGTG
GTATCATGCTGCAGAAGTGGCTGATTACGCGCGCATAATGAAAGGAGGTG
AAGATTATATGAAAGAACAATACGACATTGAGATTGATGAGCTCCGCAGG
CAGGAGCTTGAGGATGAGCTTTTATTTGGAGATGATACTACTTGGACACG
GAAGGCGGTTGCAGCAATTGCAGATGCCAAATCCAAGGTAGAGGGTATAG
GGAACCCACCCGAGATTGTGCGACTGCCCGTCCCAAGCCAAGAGCCAAAG
GAACCTGTCGCCGCACACTCACCACCAGAGGAAATTGCTGCCATGTATGC
ATCGCAGCATGCAATCAAGTCAGGCCAAAGTTCGTCTGCGGAGTCTATCC
CCGCGTCAGATACTGGGCCTGGTTCGGCCTCCACTCCGGAGACGTCCAAT
GATGTGGATCGTACAGCCGAAGCTTTGGGCCAGGTTGACCTGAATACAAC
CTCTGCCCCGAAAAAGAAAAAGAGAGATCCTGGACACGGCCGAAATAATA
TGCCCTCAAAGCGAGGTCCTACTACATCTGACCATGCGTTCTTCTTCTAC
CAAGCTCTACCCCAATTCTACCTTTCGCCCTTGGACATCCGCATCTTGAA
AGCTGCATTTGGCGATTACTCTTCATTCCCGGCCACCATTCTCCCTAGGG
TTGAGCGTATTTCGAGCGGTCATATTGTGGACGACGAGCTACGCAAACGA
GTCAAGTATCTCAGCCACCTGCCGCAAGGTTGTGAGGTGAACTTTCTCGA
GTGTGACTGGAGAGACGTAGTTGTGCCGGAGGTGCTAGAAAATTTCAAGT
CGGAAACTGAAAAGAGACGGAAGCGCAATAAGGAGAAAGAGGTGCGAGAA
GAGAAGGATCGCATCCGAGCGGAGAAAGAAGAGGATGAAAAGCGCTGGGC
AGCGGCGCGCCGGAAGAGGCCTAGCATTGGCCCCGTCGATGAACCTCCCT
TCTCCGACCGCGATTTTCAGCCGTTATCGGGCTCTGCTGGCGAGCCTTCT
GGCTTCGATATAGGCTCTTCCTCTGCATCCCCTCCGCCCTCCTCGAGTCC
CCCCGGATCTCGTACGGTGTGGGGAACAGTTGCCGCTCCGACACTTTCGG
CTCCGTCGAGCTCACAAGCCCCTGCCGATGGTTGGCTGCAGGGCTGGGAG
GAGGAGCTGTGGGCCCAGCAAGAAAGGGAGCTCTTGGCTCAATCTGCTGC
TGAGGCGAACACTCCAGCTTCTTCCTCTGGCGGGAAAAAGAAGAAGAATA
AGAAAATTACACTCATGTCGACCAATATCCAAAGAGGGGCATAGAAGGTG
CAACTATCTGTGCGTTCTTCGTCCACCAGCTTCTGGTGATCCACTTTGTC
GTTTACAATCTTTTCTATACGGTATTTGTGGATTTTTCTCTACTTTATCA
CGAATATTATGTTATAATCATGTGTGGGGGGTTGTTTGCAGATACATTCT
GGGAAGAGCATAGGTCAGGAGTCGAGAGTGTTTTTATGGAAATTTGATGG
CTACATATGTGTACCAATTACAACAACTAGATAAAAATGATAAAGCAGCT
AAGATTAGAG back to topCoding sequence (CDS) from alignment at ch4:2273034..2276093+ >KJC3_005309-T2 ID=KJC3_005309-T2|Name=KJC3_005309-T2|organism=Aspergillus niger KJC3|type=CDS|length=4392bp|location=Sequence derived from alignment at ch4:2273034..2276093+ (Aspergillus niger KJC3)
ATGTCGGGCAATCCTAGTCAGATTCCTACCACATCTATGAAAGCGGTGAA
CATTCCGAGTCAGCCAGCCTCTGCGACATTTACTCCATCGTCATTCGATA
GCGGCTCTCCGCGGTCTCAGCGGCGCCCGGGAGGCTCTGGCAGCTTTGGA
GCTGGGTTGACATCTCAGGCTAGAAACTCAGGCTCTCCTAGGCACAATCA
AGCTCTCAGGAGTCAGCATAAACGACAGAGGCGTCCTCGATTGCTAGATG
ATGAGGATTATAGCGAATCGGCCATCATGAGATCCACGACCAGTCGCAAG
GGACAGACGTCCATCACTCATCTGATGAACTTCTCCCTTCCCCCTCGTCC
TCAGTACCATCCTCCACCCCGTAATACTCGCCGCTATACGTCCTGGGGTC
CAGGTTCCGGCTACCATGCCATGGACAAATCCCGCTACGTTCATGCCAAC
TATCGCTTTATTGTGACGCCAAATCGCAACTACCATGCACAAGCGGCCAA
TGCTGATGTCCATCTTGACTGGGATTCAGTGATGCAGGTCTTGGTATCAG
AGCAGACACAGTCAGCTAGCTGCCCCATCTGTTTGTCCACACCGGTAGCG
CCACGCATGGCTCGTTGTGGTCATATATTCTGCCTTCCTTGTTTGATTCG
CTACATGCATTCGACTGACGAGGAAAAACCGGTTCCTGAGAAGAAGCCAC
GATGGAAAAAGTGCCCCATCTGTTGGGACTCTGTGTACATTTCGGAAACT
CGGCCTGTGCGATGGTTTCGTGGCCAAGAAGGGGACCTCCCATTCGAGGG
GGGTGATGTCGTGCTAAGGCTAGTGAAAAGAGAGCCCGGAAGCACGTTAG
CACTCCCACGGGATGGAGCTGAGGGAATAGCACCAGATGAGGATGTTCCG
TGGTATCATGCTGCAGAAGTGGCTGATTACGCGCGCATAATGAAAGGAGG
TGAAGATTATATGAAAGAACAATACGACATTGAGATTGATGAGCTCCGCA
GGCAGGAGCTTGAGGATGAGCTTTTATTTGGAGATGATACTACTTGGACA
CGGAAGGCGGTTGCAGCAATTGCAGATGCCAAATCCAAGGTAGAGGGTAT
AGGGAACCCACCCGAGATTGTGCGACTGCCCGTCCCAAGCCAAGAGCCAA
AGGAACCTGTCGCCGCACACTCACCACCAGAGGAAATTGCTGCCATGTAT
GCATCGCAGCATGCAATCAAGTCAGGCCAAAGTTCGTCTGCGGAGTCTAT
CCCCGCGTCAGATACTGGGCCTGGTTCGGCCTCCACTCCGGAGACGTCCA
ATGATGTGGATCGTACAGCCGAAGCTTTGGGCCAGGTTGACCTGAATACA
ACCTCTGCCCCGAAAAAGAAAAAGAGAGATCCTGGACACGGCCGAAATAA
TATGCCCTCAAAGCGAGGTCCTACTACATCTGACCATGCGTTCTTCTTCT
ACCAAGCTCTACCCCAATTCTACCTTTCGCCCTTGGACATCCGCATCTTG
AAAGCTGCATTTGGCGATTACTCTTCATTCCCGGCCACCATTCTCCCTAG
GGTTGAGCGTATTTCGAGCGGTCATATTGTGGACGACGAGCTACGCAAAC
GAGTCAAGTATCTCAGCCACCTGCCGCAAGGTTGTGAGGTGAACTTTCTC
GAGTGTGACTGGAGAGACGTAGTTGTGCCGGAGGTGCTAGAAAATTTCAA
GTCGGAAACTGAAAAGAGACGGAAGCGCAATAAGGAGAAAGAGGTGCGAG
AAGAGAAGGATCGCATCCGAGCGGAGAAAGAAGAGGATGAAAAGCGCTGG
GCAGCGGCGCGCCGGAAGAGGCCTAGCATTGGCCCCGTCGATGAACCTCC
CTTCTCCGACCGCGATTTTCAGCCGTTATCGGGCTCTGCTGGCGAGCCTT
CTGGCTTCGATATAGGCTCTTCCTCTGCATCCCCTCCGCCCTCCTCGAGT
CCCCCCGGATCTCGTACGGTGTGGGGAACAGTTGCCGCTCCGACACTTTC
GGCTCCGTCGAGCTCACAAGCCCCTGCCGATGGTTGGCTGCAGGGCTGGG
AGGAGGAGCTGTGGGCCCAGCAAGAAAGGGAGCTCTTGGCTCAATCTGCT
GCTGAGGCGAACACTCCAGCTTCTTCCTCTGGCGGGAAAAAGAAGAAGAA
TAAGAAAATTACACTCATGTCGACCAATATCCAAAGAGGGGCATAGATGT
CGGGCAATCCTAGTCAGATTCCTACCACATCTATGAAAGCGGTGAACATT
CCGAGTCAGCCAGCCTCTGCGACATTTACTCCATCGTCATTCGATAGCGG
CTCTCCGCGGTCTCAGCGGCGCCCGGGAGGCTCTGGCAGCTTTGGAGCTG
GGTTGACATCTCAGGCTAGAAACTCAGGCTCTCCTAGGCACAATCAAGCT
CTCAGGAGTCAGCATAAACGACAGAGGCGTCCTCGATTGCTAGATGATGA
GGATTATAGCGAATCGGCCATCATGAGATCCACGACCAGTCGCAAGGGAC
AGACGTCCATCACTCATCTGATGAACTTCTCCCTTCCCCCTCGTCCTCAG
TACCATCCTCCACCCCGTAATACTCGCCGCTATACGTCCTGGGGTCCAGG
TTCCGGCTACCATGCCATGGACAAATCCCGCTACGTTCATGCCAACTATC
GCTTTATTGTGACGCCAAATCGCAACTACCATGCACAAGCGGCCAATGCT
GATGTCCATCTTGACTGGGATTCAGTGATGCAGGTCTTGGTATCAGAGCA
GACACAGTCAGCTAGCTGCCCCATCTGTTTGTCCACACCGGTAGCGCCAC
GCATGGCTCGTTGTGGTCATATATTCTGCCTTCCTTGTTTGATTCGCTAC
ATGCATTCGACTGACGAGGAAAAACCGGTTCCTGAGAAGAAGCCACGATG
GAAAAAGTGCCCCATCTGTTGGGACTCTGTGTACATTTCGGAAACTCGGC
CTGTGCGATGGTTTCGTGGCCAAGAAGGGGACCTCCCATTCGAGGGGGGT
GATGTCGTGCTAAGGCTAGTGAAAAGAGAGCCCGGAAGCACGTTAGCACT
CCCACGGGATGGAGCTGAGGGAATAGCACCAGATGAGGATGTTCCGTGGT
ATCATGCTGCAGAAGTGGCTGATTACGCGCGCATAATGAAAGGAGGTGAA
GATTATATGAAAGAACAATACGACATTGAGATTGATGAGCTCCGCAGGCA
GGAGCTTGAGGATGAGCTTTTATTTGGAGATGATACTACTTGGACACGGA
AGGCGGTTGCAGCAATTGCAGATGCCAAATCCAAGGTAGAGGGTATAGGG
AACCCACCCGAGATTGTGCGACTGCCCGTCCCAAGCCAAGAGCCAAAGGA
ACCTGTCGCCGCACACTCACCACCAGAGGAAATTGCTGCCATGTATGCAT
CGCAGCATGCAATCAAGTCAGGCCAAAGTTCGTCTGCGGAGTCTATCCCC
GCGTCAGATACTGGGCCTGGTTCGGCCTCCACTCCGGAGACGTCCAATGA
TGTGGATCGTACAGCCGAAGCTTTGGGCCAGGTTGACCTGAATACAACCT
CTGCCCCGAAAAAGAAAAAGAGAGATCCTGGACACGGCCGAAATAATATG
CCCTCAAAGCGAGGTCCTACTACATCTGACCATGCGTTCTTCTTCTACCA
AGCTCTACCCCAATTCTACCTTTCGCCCTTGGACATCCGCATCTTGAAAG
CTGCATTTGGCGATTACTCTTCATTCCCGGCCACCATTCTCCCTAGGGTT
GAGCGTATTTCGAGCGGTCATATTGTGGACGACGAGCTACGCAAACGAGT
CAAGTATCTCAGCCACCTGCCGCAAGGTTGTGAGGTGAACTTTCTCGAGT
GTGACTGGAGAGACGTAGTTGTGCCGGAGGTGCTAGAAAATTTCAAGTCG
GAAACTGAAAAGAGACGGAAGCGCAATAAGGAGAAAGAGGTGCGAGAAGA
GAAGGATCGCATCCGAGCGGAGAAAGAAGAGGATGAAAAGCGCTGGGCAG
CGGCGCGCCGGAAGAGGCCTAGCATTGGCCCCGTCGATGAACCTCCCTTC
TCCGACCGCGATTTTCAGCCGTTATCGGGCTCTGCTGGCGAGCCTTCTGG
CTTCGATATAGGCTCTTCCTCTGCATCCCCTCCGCCCTCCTCGAGTCCCC
CCGGATCTCGTACGGTGTGGGGAACAGTTGCCGCTCCGACACTTTCGGCT
CCGTCGAGCTCACAAGCCCCTGCCGATGGTTGGCTGCAGGGCTGGGAGGA
GGAGCTGTGGGCCCAGCAAGAAAGGGAGCTCTTGGCTCAATCTGCTGCTG
AGGCGAACACTCCAGCTTCTTCCTCTGGCGGGAAAAAGAAGAAGAATAAG
AAAATTACACTCATGTCGACCAATATCCAAAGAGGGGCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005309-T2.utr5p1 | KJC3_005309-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005309-T2.utr3p1 | KJC3_005309-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017907 |
| DBxref | InterPro:IPR018957 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR001841 |
| DBxref | PFAM:PF13445 |
| DBxref | PFAM:PF00097 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2273034..2276093 + |
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