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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2294310..2295565+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005315-T1 ID=KJC3_005315-T1|Name=KJC3_005315-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1256bp|location=Sequence derived from alignment at ch4:2294310..2295565+ (Aspergillus niger KJC3)
ATGTCCGATAAAGACCTCCTCACCACCATAACCAAAGAACTCGCCGGGAC
TCAGTATACCTCATCCTCTCTGACCCCACTAAGCGGGGGAACCGCCAACT
TTGTCTATCGGGCTCAGCTCGACCAGCCGCTCCCAGATGGAACAAATTCC
GTCATTGTGAAGCACACAGAGGCGTTTATTGCCCTGAATCGGGAATTTAA
ACTTCCCGCTGAACGCTGTGTCGGTATTCCCTTGTGCAAAGTCGGGACAT
ACGCAAGTACAAACATCGTATTGACATATGCCATATAGCTTTTCGAAGAA
TCCATCTTGAAGGCTCTCGACGGGTTTCCTAGCATACTGGACAGAAGCAA
GCATTGCGAGACGAACCCTCAAGAAGTGTTAGTCAAGACACCTCGTCTCT
TCTCATTCAATCGCGAAACCTACACTGCTGTTCTAGAAGACCTCCCCGAT
TCTCTGGACCTTAAGTCCTACTTAATTTCAACAGCTGCTTCCAAAAACGT
GACTCAAGAATGGGCATCTTCTATAGGCCGTGCACTAGGGAATTGGCTAC
GATCATTCCATCACTGGGCTGATAATGAGGCCCAATCAGGGGTGGCGGCA
GAGATGAACAAGAACCAGTATATGAGAGACTTGAAGTTTATGGTCAACTA
TGATGCCCTCGTGAACACAATTGATAAATACCCAATTGTATTGGGAGACT
CTCGGGATGTGTTCAGCAAGGTTCGGGAAATGGCGGCTGCAGAGTTGAGT
CAAAAGGACGGAAATGGTTTTGGGATAATCCATGGAGACTTTTGGTCGGG
AAAGTACGTGGTTCTTTGCCTCGATTCATCAAAAGGAGAAGCAAACTGAT
GCAATATAGTGTCCTCATCCCCAAGATGGCCCTAGAGCAACCATATCACC
TTCCCATATTCATCATCGACTGGGAACTCTGCCACTGCGGTGCTCGTGCC
CTCGATCTAGGACAGATGTTTGCTGAGCTATACCTATTGAAGCATTTCAA
GGACATCGATGCTGCGACGTGGATAATTCAAGGCTTTATGAAAGAATATC
AGGGCCTGGATGATGAGACGGCCTTTCGGGTATTGATCCATGTTGGCGTC
CATTTCATTGCCTGGGCACCCTTAATTCCTAATTGGGGTACCTCACAGCA
GGTTGAAGATGCTGTTCGTCTGGGTAGAGACATCGTCACCAAGGCATGGG
AAAAGGATAGGAGCTGGTTTGAAGGGGTATGGAAGTCACTGTTTCGAGAT
CAGTAG back to topCoding sequence (CDS) from alignment at ch4:2294310..2295565+ >KJC3_005315-T1 ID=KJC3_005315-T1|Name=KJC3_005315-T1|organism=Aspergillus niger KJC3|type=CDS|length=3393bp|location=Sequence derived from alignment at ch4:2294310..2295565+ (Aspergillus niger KJC3)
ATGTCCGATAAAGACCTCCTCACCACCATAACCAAAGAACTCGCCGGGAC
TCAGTATACCTCATCCTCTCTGACCCCACTAAGCGGGGGAACCGCCAACT
TTGTCTATCGGGCTCAGCTCGACCAGCCGCTCCCAGATGGAACAAATTCC
GTCATTGTGAAGCACACAGAGGCGTTTATTGCCCTGAATCGGGAATTTAA
ACTTCCCGCTGAACGCTGTCTTTTCGAAGAATCCATCTTGAAGGCTCTCG
ACGGGTTTCCTAGCATACTGGACAGAAGCAAGCATTGCGAGACGAACCCT
CAAGAAGTGTTAGTCAAGACACCTCGTCTCTTCTCATTCAATCGCGAAAC
CTACACTGCTGTTCTAGAAGACCTCCCCGATTCTCTGGACCTTAAGTCCT
ACTTAATTTCAACAGCTGCTTCCAAAAACGTGACTCAAGAATGGGCATCT
TCTATAGGCCGTGCACTAGGGAATTGGCTACGATCATTCCATCACTGGGC
TGATAATGAGGCCCAATCAGGGGTGGCGGCAGAGATGAACAAGAACCAGT
ATATGAGAGACTTGAAGTTTATGGTCAACTATGATGCCCTCGTGAACACA
ATTGATAAATACCCAATTGTATTGGGAGACTCTCGGGATGTGTTCAGCAA
GGTTCGGGAAATGGCGGCTGCAGAGTTGAGTCAAAAGGACGGAAATGGTT
TTGGGATAATCCATGGAGACTTTTGGTCGGGAAATGTCCTCATCCCCAAG
ATGGCCCTAGAGCAACCATATCACCTTCCCATATTCATCATCGACTGGGA
ACTCTGCCACTGCGGTGCTCGTGCCCTCGATCTAGGACAGATGTTTGCTG
AGCTATACCTATTGAAGCATTTCAAGGACATCGATGCTGCGACGTGGATA
ATTCAAGGCTTTATGAAAGAATATCAGGGCCTGGATGATGAGACGGCCTT
TCGGGTATTGATCCATGTTGGCGTCCATTTCATTGCCTGGGCACCCTTAA
TTCCTAATTGGGGTACCTCACAGCAGGTTGAAGATGCTGTTCGTCTGGGT
AGAGACATCGTCACCAAGGCATGGGAAAAGGATAGGAGCTGGTTTGAAGG
GGTATGGAAGTCACTGTTTCGAGATCAGTAGATGTCCGATAAAGACCTCC
TCACCACCATAACCAAAGAACTCGCCGGGACTCAGTATACCTCATCCTCT
CTGACCCCACTAAGCGGGGGAACCGCCAACTTTGTCTATCGGGCTCAGCT
CGACCAGCCGCTCCCAGATGGAACAAATTCCGTCATTGTGAAGCACACAG
AGGCGTTTATTGCCCTGAATCGGGAATTTAAACTTCCCGCTGAACGCTGT
CTTTTCGAAGAATCCATCTTGAAGGCTCTCGACGGGTTTCCTAGCATACT
GGACAGAAGCAAGCATTGCGAGACGAACCCTCAAGAAGTGTTAGTCAAGA
CACCTCGTCTCTTCTCATTCAATCGCGAAACCTACACTGCTGTTCTAGAA
GACCTCCCCGATTCTCTGGACCTTAAGTCCTACTTAATTTCAACAGCTGC
TTCCAAAAACGTGACTCAAGAATGGGCATCTTCTATAGGCCGTGCACTAG
GGAATTGGCTACGATCATTCCATCACTGGGCTGATAATGAGGCCCAATCA
GGGGTGGCGGCAGAGATGAACAAGAACCAGTATATGAGAGACTTGAAGTT
TATGGTCAACTATGATGCCCTCGTGAACACAATTGATAAATACCCAATTG
TATTGGGAGACTCTCGGGATGTGTTCAGCAAGGTTCGGGAAATGGCGGCT
GCAGAGTTGAGTCAAAAGGACGGAAATGGTTTTGGGATAATCCATGGAGA
CTTTTGGTCGGGAAATGTCCTCATCCCCAAGATGGCCCTAGAGCAACCAT
ATCACCTTCCCATATTCATCATCGACTGGGAACTCTGCCACTGCGGTGCT
CGTGCCCTCGATCTAGGACAGATGTTTGCTGAGCTATACCTATTGAAGCA
TTTCAAGGACATCGATGCTGCGACGTGGATAATTCAAGGCTTTATGAAAG
AATATCAGGGCCTGGATGATGAGACGGCCTTTCGGGTATTGATCCATGTT
GGCGTCCATTTCATTGCCTGGGCACCCTTAATTCCTAATTGGGGTACCTC
ACAGCAGGTTGAAGATGCTGTTCGTCTGGGTAGAGACATCGTCACCAAGG
CATGGGAAAAGGATAGGAGCTGGTTTGAAGGGGTATGGAAGTCACTGTTT
CGAGATCAGTAGATGTCCGATAAAGACCTCCTCACCACCATAACCAAAGA
ACTCGCCGGGACTCAGTATACCTCATCCTCTCTGACCCCACTAAGCGGGG
GAACCGCCAACTTTGTCTATCGGGCTCAGCTCGACCAGCCGCTCCCAGAT
GGAACAAATTCCGTCATTGTGAAGCACACAGAGGCGTTTATTGCCCTGAA
TCGGGAATTTAAACTTCCCGCTGAACGCTGTCTTTTCGAAGAATCCATCT
TGAAGGCTCTCGACGGGTTTCCTAGCATACTGGACAGAAGCAAGCATTGC
GAGACGAACCCTCAAGAAGTGTTAGTCAAGACACCTCGTCTCTTCTCATT
CAATCGCGAAACCTACACTGCTGTTCTAGAAGACCTCCCCGATTCTCTGG
ACCTTAAGTCCTACTTAATTTCAACAGCTGCTTCCAAAAACGTGACTCAA
GAATGGGCATCTTCTATAGGCCGTGCACTAGGGAATTGGCTACGATCATT
CCATCACTGGGCTGATAATGAGGCCCAATCAGGGGTGGCGGCAGAGATGA
ACAAGAACCAGTATATGAGAGACTTGAAGTTTATGGTCAACTATGATGCC
CTCGTGAACACAATTGATAAATACCCAATTGTATTGGGAGACTCTCGGGA
TGTGTTCAGCAAGGTTCGGGAAATGGCGGCTGCAGAGTTGAGTCAAAAGG
ACGGAAATGGTTTTGGGATAATCCATGGAGACTTTTGGTCGGGAAATGTC
CTCATCCCCAAGATGGCCCTAGAGCAACCATATCACCTTCCCATATTCAT
CATCGACTGGGAACTCTGCCACTGCGGTGCTCGTGCCCTCGATCTAGGAC
AGATGTTTGCTGAGCTATACCTATTGAAGCATTTCAAGGACATCGATGCT
GCGACGTGGATAATTCAAGGCTTTATGAAAGAATATCAGGGCCTGGATGA
TGAGACGGCCTTTCGGGTATTGATCCATGTTGGCGTCCATTTCATTGCCT
GGGCACCCTTAATTCCTAATTGGGGTACCTCACAGCAGGTTGAAGATGCT
GTTCGTCTGGGTAGAGACATCGTCACCAAGGCATGGGAAAAGGATAGGAG
CTGGTTTGAAGGGGTATGGAAGTCACTGTTTCGAGATCAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR002575 |
| DBxref | PFAM:PF01636 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2294310..2295565 + |
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