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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2369208..2370203- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005344-T1 ID=KJC3_005344-T1|Name=KJC3_005344-T1|organism=Aspergillus niger KJC3|type=mRNA|length=996bp|location=Sequence derived from alignment at ch4:2369208..2370203- (Aspergillus niger KJC3)
CTTCATCACCTCCATCTCTATATCACAACCATTGAAACTTGAATCTGGAT
ATTGGTATTACTATTGGTTTTTAGGAAAGGTTGCTTTCTACGCGTCGAGC
CCAGTGTCGAATTCTTCACCATGAAGTTGTCTGCTACTGCTACCGTCTTG
GGGTTGCTTCCCTTGGCCCTGGCCGAATCGATTCTGGTCACGTTCCCTTC
AGGTACCCCTGACTCGGTGGTTGATCAGGCAAAGCAATCAGTTAAGGACG
CTGTATGTGACCGGGTGCTTTGACAGCGTTGGCACATCTCTATTTTACTG
ACTGGTCGTTTCTGGTAGGGTGGCAAGATCACCCATAATTACAGTAAGCA
TCATGCAGCGTTCCTAGTTCCCTAGTCATCCTTGCGTTTTGGGTAGTGGC
AGTGCTAACATGCCGCTTTATACAGCTTTGCTCAAGTAATTCTCTCCTGA
AAGTTTCGGAGTGCTTGGTCTGACATACATACACACAGGGGCTTCGCAGC
CGACACCAAGGACGATTCGGTTCAACAGCTATCGACTGAATTCGCAGCAT
ACAATCCAACTATTGAGAAAGACATCACTGTCACTATCCAGTAATGGGAT
ATTGGATATTCCGGGAGAAGCAAGCTCCCTTTTCTCCATTCCAAATTACT
ACTGAATGATGGATGGTTCTCCCGCTGGTTTCGGGGCTTGACCGTTGATG
CTCGATAATGGATGAATAGATGGGGAAAAACTAGCCTAGATTGTAATTCA
GGATTTCTATGTATCATTGTCTTTCTCTGTTTTGAAAAAGGGAGTATGTG
TCTCGTTGTCGCCTGAATGAACCATGTTATGGACTTCTAAAGCCGGCGAC
TGTTTCCCATAACCCAACAAACAACAAAATCACCATGACATGAATAACTG
AATTGGATAATTCGTCACGATTTTAAATCTTATGAACCACTTTGATCTTT
GGTGGGTGTTGTTTCATATGGTGGAAGTAGAAAATAGGAAGCAACG back to topCoding sequence (CDS) from alignment at ch4:2369208..2370203- >KJC3_005344-T1 ID=KJC3_005344-T1|Name=KJC3_005344-T1|organism=Aspergillus niger KJC3|type=CDS|length=1092bp|location=Sequence derived from alignment at ch4:2369208..2370203- (Aspergillus niger KJC3)
GGGCTTCGCAGCCGACACCAAGGACGATTCGGTTCAACAGCTATCGACTG
AATTCGCAGCATACAATCCAACTATTGAGAAAGACATCACTGTCACTATC
CAGTAACTTTGCTCAAGGTGGCAAGATCACCCATAATTACAATGAAGTTG
TCTGCTACTGCTACCGTCTTGGGGTTGCTTCCCTTGGCCCTGGCCGAATC
GATTCTGGTCACGTTCCCTTCAGGTACCCCTGACTCGGTGGTTGATCAGG
CAAAGCAATCAGTTAAGGACGCTGGGCTTCGCAGCCGACACCAAGGACGA
TTCGGTTCAACAGCTATCGACTGAATTCGCAGCATACAATCCAACTATTG
AGAAAGACATCACTGTCACTATCCAGTAACTTTGCTCAAGGTGGCAAGAT
CACCCATAATTACAATGAAGTTGTCTGCTACTGCTACCGTCTTGGGGTTG
CTTCCCTTGGCCCTGGCCGAATCGATTCTGGTCACGTTCCCTTCAGGTAC
CCCTGACTCGGTGGTTGATCAGGCAAAGCAATCAGTTAAGGACGCTGGGC
TTCGCAGCCGACACCAAGGACGATTCGGTTCAACAGCTATCGACTGAATT
CGCAGCATACAATCCAACTATTGAGAAAGACATCACTGTCACTATCCAGT
AACTTTGCTCAAGGTGGCAAGATCACCCATAATTACAATGAAGTTGTCTG
CTACTGCTACCGTCTTGGGGTTGCTTCCCTTGGCCCTGGCCGAATCGATT
CTGGTCACGTTCCCTTCAGGTACCCCTGACTCGGTGGTTGATCAGGCAAA
GCAATCAGTTAAGGACGCTGGGCTTCGCAGCCGACACCAAGGACGATTCG
GTTCAACAGCTATCGACTGAATTCGCAGCATACAATCCAACTATTGAGAA
AGACATCACTGTCACTATCCAGTAACTTTGCTCAAGGTGGCAAGATCACC
CATAATTACAATGAAGTTGTCTGCTACTGCTACCGTCTTGGGGTTGCTTC
CCTTGGCCCTGGCCGAATCGATTCTGGTCACGTTCCCTTCAGGTACCCCT
GACTCGGTGGTTGATCAGGCAAAGCAATCAGTTAAGGACGCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005344-T1.utr3p1 | KJC3_005344-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005344-T1.utr5p1 | KJC3_005344-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| DBxref | InterPro:IPR037045 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2369208..2370203 - |
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