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KJC3_005357-T1, KJC3_005357-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005357-T1
Unique NameKJC3_005357-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2405547..2407843-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005357-T1 ID=KJC3_005357-T1|Name=KJC3_005357-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2297bp|location=Sequence derived from alignment at ch4:2405547..2407843- (Aspergillus niger KJC3)
CGGGGAGACCTCCCTGTATGTGAGCATAAGCTTGGATCAATGGAGGTCCT
TAAACAGCTCCAAGCTTCTGTTACCCAAGCCTTTGGCGATTATTTCAAAG
ATGCCTACGAAATCATTCAACAAGAACTTGCTCTTCGAGACGCGAAGGTG
CAGGCGGCCGAGGAGAGGGTTAGAGCTGCAGATGAAGCACGAAAAAGAAC
GGATGCTGAAATGGCCGCCTTGAAGGATGAGGTTACTCTCCTACGGAACG
AGCTACGTCTCGGGGATGTTGGCTTCACTGAAGACCAAGTTACTGCTCAG
AAGTCCCTCGAACTGGAGGCAACGTACGCGCCGCATCGTGCTATAGATCG
TATATGTGCCAATCGCATGGACTCCGAGGGCTTCAGCTCTACTGAGATAA
CGCCTGTGAGGGATCTGTATGTCGCGCTCTACAGAGAAGCTCAGACGCTT
ATGAAAGCCTCTGGCGAACTTCGAAAACAAGTCAAACGTCACAAAAAAAA
GTTGATGCATTGGAGAAAGAGCCTCGACCGCGACAACTTCACCTTGGTAC
TCGATGGGAAAGCAGTTGAATTTCAGCGGGCTAAGACAAACGGCTGTGAA
GAACATTCAAGCTTGTTCACTGATTTATCAACACCTACTCCACTAAAATC
TTCAGAATCGGCCATTCATCCAGTTTTACGAGGAGCTTCCGCCCCTATTT
TGCATACTTTAGGAGTAGGTGCTTATGATAGATCTTCAAATGACGACGAG
CGAAGGGAGCCGGCTGCAGCTCAGAGTGCAACTGCTCCGGCCGCAACTAT
CAAACGGAAACGTTCAGCATCACAACCGCCTCATCAGATATCCCCAGCAA
TTCATGACCATGTCATTATCCATAAATACAGTGGCCCAAGCCAGCCTATT
TCAATCAAAGAGGAGAGCTTATCATCCAGCCCTTCGGGGAGGCCATTGTC
TAGTTGCGAGGCTATTGGAACCCAGGACCTAGATGAGGTTGGTGTCATGG
TTGAAACGCCAACTAAGAGAAAGAAGTATAAGGGAATTAGCTCCCAGCGA
GCGGCTTCACCAGCGATTGAAACCAGATGCAAAGACCTGCCCCCAGCAAC
AGTTGATTCATTTTCGAGACGAGCCACGGTACTGCAATCAGTCGATGGCA
ACACGAGCACCAATAGATATGACCAACAGTTAGGCACAGCAGCCGCGAAG
GGGTCAAAACCAAGACCTAAATACTCCATCTCGGCGATGGCTGAGGATGG
CGAAGAGAATGACGCGGAAGCCGCTACACCAAATCGATTTGACACGTCGG
CATCTGAAGCTAGGACGCCACGTTCAGATCCAGGCAAGGAAGGCCAATCT
GCCGTACAGCGACTGGAGGGGCTTCTTGAAGGACCGGTACCTGCGAAGCA
ACAACTCCAGCCCAAAAGTACAATTAGCGAATTTACAAGGGGTCGCACAG
TGCAAAGCTCCCCCTCTTCTGTTGGACGACCTTTGTCACATATATCCGAA
AATAGCAGGAGAATACAGGCAAATGCTAAGTCAGAAAATATGCAGGGGGG
TTCGAAACTTGATACTCAACATGACACCACTCAGGCCACCTCGTCTTCGG
GCAGCGAAGCACAACGGATAGAGGAGAACGCCACGCGTATACAATATAGA
GCTTTGCCGCTGCATTGTCTCGAACTCAGCCATTTCAAAATTAATCCAAA
TTATAATCAAGGGGTAGATTTTGCATTTAGCAGTGTCATCCGCACCACGG
ACGAGCGCAAGTGTGCAAAGGGTTGTATGCGCCCTGGCTGCTGCGGAGGC
AAGTTCAATGCCATGGCACGCCTGGGCGGTCTTCCGACGAACGCAACCTC
TAACAAGGACAGAGAACAGGAAGAGCGGAAGATTCTGGAGGACTATTTGG
GAGAAGAAAGACATATACTCGATAAACTAAGCACAGAGGATCGGGAGAGC
CTTCTGCAAGAGGCGAGCGCCAGGCTTATTGCCAATCGATTTGGGAAGCA
TAGGCATCACCACCAGCGATCAGGATCGCCACCTGGATACTGGCGCACAG
ATATGCCCGATACACAGGAATTGCAGCGTGATCATGAGGAGGCAAGGGAA
ATTGAAAGGGAGAAGGTGCGACACCGATATCGAGAGGCAATGCGCCCGGG
TGGTCTCTGGAAGTTTGCAGATGAATGAAAACAGTGTAATTAAGGGCTGC
GCTTTGGTTTACAGGGGAGCTTCTGAAAAAGCTGGCTAGGCAGTAAATAG
ATGCCGGGGTTTCCCCTACAGTGGCTTCCAATAAGTCTAAACATTGC
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Coding sequence (CDS) from alignment at ch4:2405547..2407843-

>KJC3_005357-T1 ID=KJC3_005357-T1|Name=KJC3_005357-T1|organism=Aspergillus niger KJC3|type=CDS|length=2139bp|location=Sequence derived from alignment at ch4:2405547..2407843- (Aspergillus niger KJC3)
ATGGAGGTCCTTAAACAGCTCCAAGCTTCTGTTACCCAAGCCTTTGGCGA
TTATTTCAAAGATGCCTACGAAATCATTCAACAAGAACTTGCTCTTCGAG
ACGCGAAGGTGCAGGCGGCCGAGGAGAGGGTTAGAGCTGCAGATGAAGCA
CGAAAAAGAACGGATGCTGAAATGGCCGCCTTGAAGGATGAGGTTACTCT
CCTACGGAACGAGCTACGTCTCGGGGATGTTGGCTTCACTGAAGACCAAG
TTACTGCTCAGAAGTCCCTCGAACTGGAGGCAACGTACGCGCCGCATCGT
GCTATAGATCGTATATGTGCCAATCGCATGGACTCCGAGGGCTTCAGCTC
TACTGAGATAACGCCTGTGAGGGATCTGTATGTCGCGCTCTACAGAGAAG
CTCAGACGCTTATGAAAGCCTCTGGCGAACTTCGAAAACAAGTCAAACGT
CACAAAAAAAAGTTGATGCATTGGAGAAAGAGCCTCGACCGCGACAACTT
CACCTTGGTACTCGATGGGAAAGCAGTTGAATTTCAGCGGGCTAAGACAA
ACGGCTGTGAAGAACATTCAAGCTTGTTCACTGATTTATCAACACCTACT
CCACTAAAATCTTCAGAATCGGCCATTCATCCAGTTTTACGAGGAGCTTC
CGCCCCTATTTTGCATACTTTAGGAGTAGGTGCTTATGATAGATCTTCAA
ATGACGACGAGCGAAGGGAGCCGGCTGCAGCTCAGAGTGCAACTGCTCCG
GCCGCAACTATCAAACGGAAACGTTCAGCATCACAACCGCCTCATCAGAT
ATCCCCAGCAATTCATGACCATGTCATTATCCATAAATACAGTGGCCCAA
GCCAGCCTATTTCAATCAAAGAGGAGAGCTTATCATCCAGCCCTTCGGGG
AGGCCATTGTCTAGTTGCGAGGCTATTGGAACCCAGGACCTAGATGAGGT
TGGTGTCATGGTTGAAACGCCAACTAAGAGAAAGAAGTATAAGGGAATTA
GCTCCCAGCGAGCGGCTTCACCAGCGATTGAAACCAGATGCAAAGACCTG
CCCCCAGCAACAGTTGATTCATTTTCGAGACGAGCCACGGTACTGCAATC
AGTCGATGGCAACACGAGCACCAATAGATATGACCAACAGTTAGGCACAG
CAGCCGCGAAGGGGTCAAAACCAAGACCTAAATACTCCATCTCGGCGATG
GCTGAGGATGGCGAAGAGAATGACGCGGAAGCCGCTACACCAAATCGATT
TGACACGTCGGCATCTGAAGCTAGGACGCCACGTTCAGATCCAGGCAAGG
AAGGCCAATCTGCCGTACAGCGACTGGAGGGGCTTCTTGAAGGACCGGTA
CCTGCGAAGCAACAACTCCAGCCCAAAAGTACAATTAGCGAATTTACAAG
GGGTCGCACAGTGCAAAGCTCCCCCTCTTCTGTTGGACGACCTTTGTCAC
ATATATCCGAAAATAGCAGGAGAATACAGGCAAATGCTAAGTCAGAAAAT
ATGCAGGGGGGTTCGAAACTTGATACTCAACATGACACCACTCAGGCCAC
CTCGTCTTCGGGCAGCGAAGCACAACGGATAGAGGAGAACGCCACGCGTA
TACAATATAGAGCTTTGCCGCTGCATTGTCTCGAACTCAGCCATTTCAAA
ATTAATCCAAATTATAATCAAGGGGTAGATTTTGCATTTAGCAGTGTCAT
CCGCACCACGGACGAGCGCAAGTGTGCAAAGGGTTGTATGCGCCCTGGCT
GCTGCGGAGGCAAGTTCAATGCCATGGCACGCCTGGGCGGTCTTCCGACG
AACGCAACCTCTAACAAGGACAGAGAACAGGAAGAGCGGAAGATTCTGGA
GGACTATTTGGGAGAAGAAAGACATATACTCGATAAACTAAGCACAGAGG
ATCGGGAGAGCCTTCTGCAAGAGGCGAGCGCCAGGCTTATTGCCAATCGA
TTTGGGAAGCATAGGCATCACCACCAGCGATCAGGATCGCCACCTGGATA
CTGGCGCACAGATATGCCCGATACACAGGAATTGCAGCGTGATCATGAGG
AGGCAAGGGAAATTGAAAGGGAGAAGGTGCGACACCGATATCGAGAGGCA
ATGCGCCCGGGTGGTCTCTGGAAGTTTGCAGATGAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0004519endonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005357KJC3_005357Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005357-T1.cdsKJC3_005357-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005357-T1.utr3p1KJC3_005357-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005357-T1.exon1KJC3_005357-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005357-T1.utr5p1KJC3_005357-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005357-T1KJC3_005357-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013882
DBxrefPFAM:PF08573
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2405547..2407843 -
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