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KJC3_005358-T1, KJC3_005358-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005358-T1
Unique NameKJC3_005358-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2408176..2409910+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005358-T1 ID=KJC3_005358-T1|Name=KJC3_005358-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1735bp|location=Sequence derived from alignment at ch4:2408176..2409910+ (Aspergillus niger KJC3)
ATGCCAAAGAGGCGCAATGTTGAAGTTCTCCCTCCGCCAAAGCGTCTCCG
CATGACCCCCAGCGGCCATCTCGATCACATATCCACACTAAGTGACGAGC
TCCTACTTCATATACTGTCTTTTCTTCCTCTCCCCGCTCTGCTAGTCTGC
CAACAGTATGTCCTCCTCAGTTCAGAGTGCCGGCTTCAAAGCTCATTACT
TCTCCCCACATAGACTCTCGCGTCGGTTCCATGTCTTAGCTGGAGATTCG
GAGCTCTGGAAAAGGCAGTATTATTCTCGATGGGTACGGCCTCGAGCGCG
TCGGTTACCAAATGCTAAGCGTGCACACTTATCCCGATCTGAAATCGAGT
ATTCGCCTAGAGTGTCTACCTGGCTTGACCACAGTCACCTGGCAAAGGAA
GGAGTAGCCACGAATTGGAAGCGACAGTATCGTCTCAGACACAACTGGTC
AAAGGGAGTCTGTCGGGTCACAGAGATCGAGTTTCAACAACCACTTCGTC
GACAGATGCTAGTAACCTTTTGTGCTGGTATCGTGCTTACAGCAGATTTA
GATCACGGCCTAAGAGCTTGGGCCGCCGAGAAGCCTGGACAATGCCTAGC
AAGGTCTCCTTTGACAAAATCGCCGTCGCGATCGTTACCCGCTCCTACAG
CAATGGCGGCTGCAACGAGCGGTCCACAGCAGAGCTTAATAGATGTCACA
GTTGGTTTTGAGGATGGCCGTCTCGGTGTCTATACTCTAGACACAACAAC
TTTCTGGATTGAAACGCGCTTTTCCTACGTTGAATGCACCGGTGAAGCCA
TCACGGCAATGGCCTTGTGCTCCCCTTTCCTCCTTTTAGTCTCTCAACAC
AAGGTTCTATCTCTGTATGAAACAATCACAGACGAGGACGGTTCTTCTTT
AACCCCACAGCTACTGACTACTCTCAAGGCGGACAGTATATTGGAGCCAT
TATCTCTATCTATCCGCGCTGCGGGTCCCAAGATAGTAGCGGCTATAGTG
TACAGTTTTTACCATATAGGCTGCGGCTGGTCGCTAGGTATTCAAGAACT
GCAATTCGGCTTGGACGGTCAGCAGCTGAGTTCTCGGCTTGCTACCACAG
TCGACTGCCAATACGGGATTGTGTCCCCAACATCTCGCAGCCGGTCAAAA
AGGGACTATCGCACCACACATGTGGTAGGCTCCGGAAATGAGCTAAATTT
CAGGCCATCCGGACCTTCAATATCACACTGTGAGCCACCAACCTCGGTGT
CCTATTCTCATCCTTACCTTTTGACGTCGCACGCGGACAATACCTTGACT
CTGTACCTTGTGGTCTCCACTTCGACAAGCCTTTCTGTGACAAGCTGCCA
GCGTCTCTGGGGCCATACATCGTCAGTCTCAGCCGTGCAGGTTAGCGATC
GTGGTAAGGCAGTTTCGGTGAGCTCTAGAGGAGACGACATCAGAATATGG
GAACTTGAATCTTTGGTTTCTTCGCTCGGAGGGCACAAGGCGTTAAAGGA
TGGGAATAGCATCCGAGTCAGCCCGGGAAACAGGGCAGATCAACGACCTG
ATAGCCTTGACTTAGTGTCGGAGTCTTCTCACGGTCAACTCAACGCGGCC
CGATCAAGCTCGGTGGACAATAGCTACAGGTCAACGAGGATGCACAATTG
TATTGGCTTCGACGATGAGCGAGTCCTTCTGCTTCGCGAAAAGGAAGCTG
GGACGCAGATGCTCGAATTATATGACTTCACGTGA
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Coding sequence (CDS) from alignment at ch4:2408176..2409910+

>KJC3_005358-T1 ID=KJC3_005358-T1|Name=KJC3_005358-T1|organism=Aspergillus niger KJC3|type=CDS|length=3354bp|location=Sequence derived from alignment at ch4:2408176..2409910+ (Aspergillus niger KJC3)
ATGCCAAAGAGGCGCAATGTTGAAGTTCTCCCTCCGCCAAAGCGTCTCCG
CATGACCCCCAGCGGCCATCTCGATCACATATCCACACTAAGTGACGAGC
TCCTACTTCATATACTGTCTTTTCTTCCTCTCCCCGCTCTGCTAGTCTGC
CAACAACTCTCGCGTCGGTTCCATGTCTTAGCTGGAGATTCGGAGCTCTG
GAAAAGGCAGTATTATTCTCGATGGGTACGGCCTCGAGCGCGTCGGTTAC
CAAATGCTAAGCGTGCACACTTATCCCGATCTGAAATCGAGTATTCGCCT
AGAGTGTCTACCTGGCTTGACCACAGTCACCTGGCAAAGGAAGGAGTAGC
CACGAATTGGAAGCGACAGTATCGTCTCAGACACAACTGGTCAAAGGGAG
TCTGTCGGGTCACAGAGATCGAGTTTCAACAACCACTTCGTCGACAGATG
CTAGTAACCTTTTGTGCTGGTATCGTGCTTACAGCAGATTTAGATCACGG
CCTAAGAGCTTGGGCCGCCGAGAAGCCTGGACAATGCCTAGCAAGGTCTC
CTTTGACAAAATCGCCGTCGCGATCGTTACCCGCTCCTACAGCAATGGCG
GCTGCAACGAGCGGTCCACAGCAGAGCTTAATAGATGTCACAGTTGGTTT
TGAGGATGGCCGTCTCGGTGTCTATACTCTAGACACAACAACTTTCTGGA
TTGAAACGCGCTTTTCCTACGTTGAATGCACCGGTGAAGCCATCACGGCA
ATGGCCTTGTGCTCCCCTTTCCTCCTTTTAGTCTCTCAACACAAGGTTCT
ATCTCTGTATGAAACAATCACAGACGAGGACGGTTCTTCTTTAACCCCAC
AGCTACTGACTACTCTCAAGGCGGACAGTATATTGGAGCCATTATCTCTA
TCTATCCGCGCTGCGGGTCCCAAGATAGTAGCGGCTATAGTGTACAGTTT
TTACCATATAGGCTGCGGCTGGTCGCTAGGTATTCAAGAACTGCAATTCG
GCTTGGACGGTCAGCAGCTGAGTTCTCGGCTTGCTACCACAGTCGACTGC
CAATACGGGATTGTGTCCCCAACATCTCGCAGCCGGTCAAAAAGGGACTA
TCGCACCACACATGTGGTAGGCTCCGGAAATGAGCTAAATTTCAGGCCAT
CCGGACCTTCAATATCACACTGTGAGCCACCAACCTCGGTGTCCTATTCT
CATCCTTACCTTTTGACGTCGCACGCGGACAATACCTTGACTCTGTACCT
TGTGGTCTCCACTTCGACAAGCCTTTCTGTGACAAGCTGCCAGCGTCTCT
GGGGCCATACATCGTCAGTCTCAGCCGTGCAGGTTAGCGATCGTGGTAAG
GCAGTTTCGGTGAGCTCTAGAGGAGACGACATCAGAATATGGGAACTTGA
ATCTTTGGTTTCTTCGCTCGGAGGGCACAAGGCGTTAAAGGATGGGAATA
GCATCCGAGTCAGCCCGGGAAACAGGGCAGATCAACGACCTGATAGCCTT
GACTTAGTGTCGGAGTCTTCTCACGGTCAACTCAACGCGGCCCGATCAAG
CTCGGTGGACAATAGCTACAGGTCAACGAGGATGCACAATTGTATTGGCT
TCGACGATGAGCGAGTCCTTCTGCTTCGCGAAAAGGAAGCTGGGACGCAG
ATGCTCGAATTATATGACTTCACGTGAATGCCAAAGAGGCGCAATGTTGA
AGTTCTCCCTCCGCCAAAGCGTCTCCGCATGACCCCCAGCGGCCATCTCG
ATCACATATCCACACTAAGTGACGAGCTCCTACTTCATATACTGTCTTTT
CTTCCTCTCCCCGCTCTGCTAGTCTGCCAACAACTCTCGCGTCGGTTCCA
TGTCTTAGCTGGAGATTCGGAGCTCTGGAAAAGGCAGTATTATTCTCGAT
GGGTACGGCCTCGAGCGCGTCGGTTACCAAATGCTAAGCGTGCACACTTA
TCCCGATCTGAAATCGAGTATTCGCCTAGAGTGTCTACCTGGCTTGACCA
CAGTCACCTGGCAAAGGAAGGAGTAGCCACGAATTGGAAGCGACAGTATC
GTCTCAGACACAACTGGTCAAAGGGAGTCTGTCGGGTCACAGAGATCGAG
TTTCAACAACCACTTCGTCGACAGATGCTAGTAACCTTTTGTGCTGGTAT
CGTGCTTACAGCAGATTTAGATCACGGCCTAAGAGCTTGGGCCGCCGAGA
AGCCTGGACAATGCCTAGCAAGGTCTCCTTTGACAAAATCGCCGTCGCGA
TCGTTACCCGCTCCTACAGCAATGGCGGCTGCAACGAGCGGTCCACAGCA
GAGCTTAATAGATGTCACAGTTGGTTTTGAGGATGGCCGTCTCGGTGTCT
ATACTCTAGACACAACAACTTTCTGGATTGAAACGCGCTTTTCCTACGTT
GAATGCACCGGTGAAGCCATCACGGCAATGGCCTTGTGCTCCCCTTTCCT
CCTTTTAGTCTCTCAACACAAGGTTCTATCTCTGTATGAAACAATCACAG
ACGAGGACGGTTCTTCTTTAACCCCACAGCTACTGACTACTCTCAAGGCG
GACAGTATATTGGAGCCATTATCTCTATCTATCCGCGCTGCGGGTCCCAA
GATAGTAGCGGCTATAGTGTACAGTTTTTACCATATAGGCTGCGGCTGGT
CGCTAGGTATTCAAGAACTGCAATTCGGCTTGGACGGTCAGCAGCTGAGT
TCTCGGCTTGCTACCACAGTCGACTGCCAATACGGGATTGTGTCCCCAAC
ATCTCGCAGCCGGTCAAAAAGGGACTATCGCACCACACATGTGGTAGGCT
CCGGAAATGAGCTAAATTTCAGGCCATCCGGACCTTCAATATCACACTGT
GAGCCACCAACCTCGGTGTCCTATTCTCATCCTTACCTTTTGACGTCGCA
CGCGGACAATACCTTGACTCTGTACCTTGTGGTCTCCACTTCGACAAGCC
TTTCTGTGACAAGCTGCCAGCGTCTCTGGGGCCATACATCGTCAGTCTCA
GCCGTGCAGGTTAGCGATCGTGGTAAGGCAGTTTCGGTGAGCTCTAGAGG
AGACGACATCAGAATATGGGAACTTGAATCTTTGGTTTCTTCGCTCGGAG
GGCACAAGGCGTTAAAGGATGGGAATAGCATCCGAGTCAGCCCGGGAAAC
AGGGCAGATCAACGACCTGATAGCCTTGACTTAGTGTCGGAGTCTTCTCA
CGGTCAACTCAACGCGGCCCGATCAAGCTCGGTGGACAATAGCTACAGGT
CAACGAGGATGCACAATTGTATTGGCTTCGACGATGAGCGAGTCCTTCTG
CTTCGCGAAAAGGAAGCTGGGACGCAGATGCTCGAATTATATGACTTCAC
GTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005358KJC3_005358Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005358-T1.exon1KJC3_005358-T1.exon1Aspergillus niger KJC3exon
KJC3_005358-T1.exon2KJC3_005358-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005358-T1.cdsKJC3_005358-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005358-T1KJC3_005358-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2408176..2409910 +
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