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KJC3_005364-T1, KJC3_005364-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005364-T1
Unique NameKJC3_005364-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2424207..2425497+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005364-T1 ID=KJC3_005364-T1|Name=KJC3_005364-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1291bp|location=Sequence derived from alignment at ch4:2424207..2425497+ (Aspergillus niger KJC3)
CCAGCGTTATACCCGACTGAGTTTAGTAAGGCTGAACGTAAAAAGAGAAT
CTCTCCCCGTGCTGCGCACCAAGAAGCTTACGGAGTACTCAGCATCATTA
TCATACGATTATCTCACCATAGGCCGACCGAGCACAGGTTGGTACATCCT
TTCTATTTCTCAAGGCGAGTTTCCGTTCTATTTTGGGCGCCATCTTCCAG
CAGTTGATTTTTTTTGGGAGCATGACTCCTACAGACCTCTAAAGTCCACC
GGCATCGATCGACCGAACGAATATTCACTTAACGTCTCAAGTGCCGGCAA
AAGCGACATTCCTCTGCTGTATCCATGTCACAGCCATGGGATTATATTGC
TAAACTTGTCTGCATTGGGGACTCGGGGACTGGGAAGTCCAGTGTGGGTA
CACTCAAGCTTGACAGACCATCTTACTGCTGACACACGGCTGCGACTTTC
TAGTTGACGGTCCGACTTTGCGAAGGGCGCTTTTCGTCCTCCCATGATGT
TACAATCGGTGTCGAGTTCGGTTCGCGGATTGTTCCGGTGGGCCCGCCAG
CTTCAAAGGCCTTGGGAGGCGAGTTCGACGGTTCTATCCGCAATCGTGCC
CCTTCAATTACACCTTCGCCCTTATTGCCCGCTACGGCTACAACCAGCGA
ATCAGTCGCTTCTGGACTGCCCAGTCCTCCACGTAGGGTACAAGAGCTCC
AGAAAAGAATGAAGTTGTCGCTATGGGACACCGCTGGCCAAGAAACGTAC
AAATCTATTACCCGCTCTTATTTCCGTGGTGCTTCGGGTGCCCTCCTGGT
CTTCGATATTACTAGGCCTTCTACATTTGTATCGTGCACACAGTGGCTTC
ATGATCTGCGGCAAATTGCAGAAGACGGCATCGTAATTGTTCTGGTCGGC
AACAAGAGTGATCTTGCCGGTGATGACTCGAGATCGCATCAGACGGTCAC
TAGGCAAGAAGCGGAGGAGTGGTGCCGTTTGAATAACATCACACGGTATG
TTGAGACAAGCGCAAAATCTGGAGAGAACGTGGAGCGTGCTTTTCTTGAG
GTGGCTGAGATGATATATCGCAACATCGAAGCTGGCAAATATGACCTCTA
CGACCGTCGAAGTGGTGTGAAGGGCTATGGTGCCACCGGCGGATCAAACC
CGGGTATCCCAAACACTGTCACTTTAGGCTTGGATGATGCCATGCGCAAG
GGTGGAAGTGGCCTGGGAGGAGGCTGTTGTTGATACATACAGAATATTAT
ACCTTCTATCGAGCTTATTGTTCAAAGGTGGAACGGAACCA
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Coding sequence (CDS) from alignment at ch4:2424207..2425497+

>KJC3_005364-T1 ID=KJC3_005364-T1|Name=KJC3_005364-T1|organism=Aspergillus niger KJC3|type=CDS|length=1698bp|location=Sequence derived from alignment at ch4:2424207..2425497+ (Aspergillus niger KJC3)
ATGTCACAGCCATGGGATTATATTGCTAAACTTGTCTGCATTGGGGACTC
GGGGACTGGGAAGTCCAGTTTGACGGTCCGACTTTGCGAAGGGCGCTTTT
CGTCCTCCCATGATGTTACAATCGGTGTCGAGTTCGGTTCGCGGATTGTT
CCGGTGGGCCCGCCAGCTTCAAAGGCCTTGGGAGGCGAGTTCGACGGTTC
TATCCGCAATCGTGCCCCTTCAATTACACCTTCGCCCTTATTGCCCGCTA
CGGCTACAACCAGCGAATCAGTCGCTTCTGGACTGCCCAGTCCTCCACGT
AGGGTACAAGAGCTCCAGAAAAGAATGAAGTTGTCGCTATGGGACACCGC
TGGCCAAGAAACGTACAAATCTATTACCCGCTCTTATTTCCGTGGTGCTT
CGGGTGCCCTCCTGGTCTTCGATATTACTAGGCCTTCTACATTTGTATCG
TGCACACAGTGGCTTCATGATCTGCGGCAAATTGCAGAAGACGGCATCGT
AATTGTTCTGGTCGGCAACAAGAGTGATCTTGCCGGTGATGACTCGAGAT
CGCATCAGACGGTCACTAGGCAAGAAGCGGAGGAGTGGTGCCGTTTGAAT
AACATCACACGGTATGTTGAGACAAGCGCAAAATCTGGAGAGAACGTGGA
GCGTGCTTTTCTTGAGGTGGCTGAGATGATATATCGCAACATCGAAGCTG
GCAAATATGACCTCTACGACCGTCGAAGTGGTGTGAAGGGCTATGGTGCC
ACCGGCGGATCAAACCCGGGTATCCCAAACACTGTCACTTTAGGCTTGGA
TGATGCCATGCGCAAGGGTGGAAGTGGCCTGGGAGGAGGCTGTTGTTGAA
TGTCACAGCCATGGGATTATATTGCTAAACTTGTCTGCATTGGGGACTCG
GGGACTGGGAAGTCCAGTTTGACGGTCCGACTTTGCGAAGGGCGCTTTTC
GTCCTCCCATGATGTTACAATCGGTGTCGAGTTCGGTTCGCGGATTGTTC
CGGTGGGCCCGCCAGCTTCAAAGGCCTTGGGAGGCGAGTTCGACGGTTCT
ATCCGCAATCGTGCCCCTTCAATTACACCTTCGCCCTTATTGCCCGCTAC
GGCTACAACCAGCGAATCAGTCGCTTCTGGACTGCCCAGTCCTCCACGTA
GGGTACAAGAGCTCCAGAAAAGAATGAAGTTGTCGCTATGGGACACCGCT
GGCCAAGAAACGTACAAATCTATTACCCGCTCTTATTTCCGTGGTGCTTC
GGGTGCCCTCCTGGTCTTCGATATTACTAGGCCTTCTACATTTGTATCGT
GCACACAGTGGCTTCATGATCTGCGGCAAATTGCAGAAGACGGCATCGTA
ATTGTTCTGGTCGGCAACAAGAGTGATCTTGCCGGTGATGACTCGAGATC
GCATCAGACGGTCACTAGGCAAGAAGCGGAGGAGTGGTGCCGTTTGAATA
ACATCACACGGTATGTTGAGACAAGCGCAAAATCTGGAGAGAACGTGGAG
CGTGCTTTTCTTGAGGTGGCTGAGATGATATATCGCAACATCGAAGCTGG
CAAATATGACCTCTACGACCGTCGAAGTGGTGTGAAGGGCTATGGTGCCA
CCGGCGGATCAAACCCGGGTATCCCAAACACTGTCACTTTAGGCTTGGAT
GATGCCATGCGCAAGGGTGGAAGTGGCCTGGGAGGAGGCTGTTGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005364KJC3_005364Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005364-T1.utr5p1KJC3_005364-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005364-T1.exon1KJC3_005364-T1.exon1Aspergillus niger KJC3exon
KJC3_005364-T1.exon2KJC3_005364-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005364-T1.cdsKJC3_005364-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005364-T1.utr3p1KJC3_005364-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005364-T1KJC3_005364-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefPFAM:PF00009
DBxrefPFAM:PF00025
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2424207..2425497 +
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