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KJC3_005367-T2, KJC3_005367-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005367-T2
Unique NameKJC3_005367-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2434435..2436305-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005367-T2 ID=KJC3_005367-T2|Name=KJC3_005367-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1871bp|location=Sequence derived from alignment at ch4:2434435..2436305- (Aspergillus niger KJC3)
CGTGAGCGATTCACTTATAGCTCCTCATATGAAGCTGTCATTAGTCACCA
TCTGTTTTCGTCATAGCTGTCCTCACCATACGAGTTAGCCCTCATTCAGT
GTACAATGTGCCTCTAGTTAGGAACTTTTTCATGGAACCTTGCAGAGCGG
GCTGGCAATGTTGTTGAAATAAGCGCTATGCTTATGTTTGTATCACTGAT
AAACTATCATCTCTAATGCTTTCTCACACGCCTCAGCATGGCCACTACTC
AGACATTACCCACATTTGACCATACCTCGAGCTTGGATTCGGGGAACTCG
TCACGCAGAAATCCGCGACAGAATGCAGCCACTGGTGCCTCTGCTGCGGG
AGTGCGTGCTCTTAGTGCACAACTGGTTGCATTCTACTTCAGAGCACCTA
TCAAGGCATTTTTTCGCACCCGAGTTGAGTATGATTCTTGATTATCTCTT
GGATATTGTCCTTTCAGTCACTGACAGCCCATCCTCTCGTTCAGTTATAT
GGTATGCGGTTGCATTGTTCCTTCGCCGGCCTGGTTGCACTGATCTCTGG
AGTCCATGTCAACTGATCTATATGGCTCTTCCTATTATTTCGCTAGGCCT
TCGCTAGAGCCGTCAATCCTCATTCTGCGAAATCCGGTTGGTCTCTGCAC
ACAACCACTCCGGGGTTACTTGTCCATGCCGTTCGCACATACGGGTGGCG
CTTCATTCCTAATCAAGTTATGCCGCCTCTCCTAGCAAATGCTGGGTTGG
TTTACCTAGCCTCAAACTTGGTTACATGGGTTGTCTAACTGCTATGGATA
GGATTGGCGCCGTCCTTTATACATCTTATCTACAAGTCCTTGGTGCTTTG
TACGAACCAGCGTCTCAAGGCATCAAACGCGTATACCCACCTGCTCCACC
TTCAAGCACATTTGCAGCTGGACTTATAGCGGGCACAATTCAGTCAATAG
TAGCGGCTCCTCTGGATGCGCTTCAGGTCCGCCTCCGAGCGAGTGACTTG
CTAGAGGGCCCCTACAAGAGCATGTGGCATTATGGCCGCCATAAACTCAA
TCAAATTGGGGTGCGTGGTATCTTCGCAGGGTGGGGCTTATCCTTCACGC
GCGACGCTTTTGGTTATGCAGTATTTTTCTCTTTCTTTGAGTTCGTGAAG
TCGCAAGCCTACTATTCATTTCTGACCTGGTACTACGGCTCACGGCGGAC
TCATTACGTGGAACAGTCACAGCACATCCAGTCGAGTGACCGCGGTGTAC
CGCTCATAAGACCACATTATGCTCTGGAGCCATGTTTCTTGATGGCTGCA
GGTGTTGCAGCTTCAATTGCTCAACAGAGTATACAGCACCCGCTAAGTGC
TATTCAAAGCCTCCATGTTGCCCGCTTGGAATACATTGACCATCAGGCGA
GTCTTCATCCTTCAAAAAGGGAAATGCTACGCCTGTACTACTCTGCATAC
CAAGAAACCTTGAAAAGATGCAGGAGGAAGGCATATAGGGCAGGTGGCTG
GCGTCGTTGGTTGTTTCGTGGGTTTGCAAGGGACGCTATTCGTCAGGTAC
CTAGCACTAGTGCAGGCTTGGTGATATTCGAGGTGGTGCGTCGTAAGTAC
GCTAATATGGCAGACGCTGTATATATCCAGAAAGATGGTTATGACATTCT
TTTAGCATGATAAACATGCTGGTTCAATCATTGCGCTCCTTCCCCCCCCC
CCCCAAAAACCCACGAAAAAAAAAAGGCTACTTTCGAAGAAGGATGTGTG
GTGTGTGCGGTATGACAGCTAGGTTGATATCGGATAGAAAGTGTTAAAAT
GATAAAGTTCATTGTCGCTTGTGGTCCATGAAAGCTAGCTATACATTGTA
ACGACGAGTAGTAAAGGGGCC
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Coding sequence (CDS) from alignment at ch4:2434435..2436305-

>KJC3_005367-T2 ID=KJC3_005367-T2|Name=KJC3_005367-T2|organism=Aspergillus niger KJC3|type=CDS|length=885bp|location=Sequence derived from alignment at ch4:2434435..2436305- (Aspergillus niger KJC3)
ATGGGTTGTCTAACTGCTATGGATAGGATTGGCGCCGTCCTTTATACATC
TTATCTACAAGTCCTTGGTGCTTTGTACGAACCAGCGTCTCAAGGCATCA
AACGCGTATACCCACCTGCTCCACCTTCAAGCACATTTGCAGCTGGACTT
ATAGCGGGCACAATTCAGTCAATAGTAGCGGCTCCTCTGGATGCGCTTCA
GGTCCGCCTCCGAGCGAGTGACTTGCTAGAGGGCCCCTACAAGAGCATGT
GGCATTATGGCCGCCATAAACTCAATCAAATTGGGGTGCGTGGTATCTTC
GCAGGGTGGGGCTTATCCTTCACGCGCGACGCTTTTGGTTATGCAGTATT
TTTCTCTTTCTTTGAGTTCGTGAAGTCGCAAGCCTACTATTCATTTCTGA
CCTGGTACTACGGCTCACGGCGGACTCATTACGTGGAACAGTCACAGCAC
ATCCAGTCGAGTGACCGCGGTGTACCGCTCATAAGACCACATTATGCTCT
GGAGCCATGTTTCTTGATGGCTGCAGGTGTTGCAGCTTCAATTGCTCAAC
AGAGTATACAGCACCCGCTAAGTGCTATTCAAAGCCTCCATGTTGCCCGC
TTGGAATACATTGACCATCAGGCGAGTCTTCATCCTTCAAAAAGGGAAAT
GCTACGCCTGTACTACTCTGCATACCAAGAAACCTTGAAAAGATGCAGGA
GGAAGGCATATAGGGCAGGTGGCTGGCGTCGTTGGTTGTTTCGTGGGTTT
GCAAGGGACGCTATTCGTCAGGTACCTAGCACTAGTGCAGGCTTGGTGAT
ATTCGAGGTGGTGCGTCGTAAGTACGCTAATATGGCAGACGCTGTATATA
TCCAGAAAGATGGTTATGACATTCTTTTAGCATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005367KJC3_005367Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005367-T2KJC3_005367-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005367-T2.cdsKJC3_005367-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005367-T2.utr3p1KJC3_005367-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005367-T2.exon2KJC3_005367-T2.exon2Aspergillus niger KJC3exon
KJC3_005367-T2.exon1KJC3_005367-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005367-T2.utr5p2KJC3_005367-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_005367-T2.utr5p1KJC3_005367-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023395
DBxrefInterPro:IPR018108
DBxrefPFAM:PF00153
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2434435..2436305 -
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