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KJC3_005385-T1, KJC3_005385-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005385-T1
Unique NameKJC3_005385-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2571835..2574477+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005385-T1 ID=KJC3_005385-T1|Name=KJC3_005385-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2643bp|location=Sequence derived from alignment at ch4:2571835..2574477+ (Aspergillus niger KJC3)
GTCAATGCCTCATCTAGGTAGGTAATGGCTAATCAGTCAACCGGTATTGG
CAGGACCACCTTGTACTGACAGCGGAACTTAGTTTACTTAGTTTTTTACT
CGCCCTCTCCATTTCCTTGAGTATTCCCTCTACATCTATTCCGAGGAACT
CTAAGGGTTTCTTGTCGTGACATTGTCCCCGCACGGTATCCGGCCGTTAG
ACGCGCATTCGACCAAGAGCGGATTTGCAATACCGGCGTCGAAGTTACTC
ACGATCTGCCCTCTCAATATGGACTCGGACCCCGTACCCTCATCATCACC
CGGATTTGGAACACCCGCCTATCCTTTCCGAAAAAATAGACCCAATGCGC
TGCCAACGAGGACATCGGTCCTTCCCATACTGCTTCCTCCTTCGACACTT
CGGCCTGTGGCCTTCCGTACCTTCACGCGCAAGCATAATCTAACAATATC
CTCCTCTGCGCTTCAAACACTAGCCACCTTTGTGGGGAAGAATTGTGGCT
CAGCATGGCGCGAAGAAGGTCTCGCAGAAAGAGCACTCGATGAAGTGGCT
AAAGCCTGGAAGAAAGCTGGCGGTGGCGTCATTGTCGATGAAGGGAAAGG
CGCCTCACTGAAAGCCATCCTCCAGACTTTAGAGAGCAATATGAGTGGGG
GAAGGGTTATCTCTGGGAAGCACGCCACGCCAGATGAGGTCCCTTCGAGA
ACAACAAGCCCAGGCCAAGGAAACAGACGCTCTAGGGCCGATCCGCAATT
GTATGCAGCGGCAGGGCTGGAAGGAGAAGGTGCAGCAGAAAATTCTGACG
TACCCTCACACCCGAGACATTGGGTTAGGGTTATCGAGGCTTTTGATATA
CCGCGATTGACCTATAATGCGGATAAGAGATACTTCGAAGTCGCAAGATC
AAGGCCCACTCTGTTCCCTCCATCCTCTCACAGGACCAATCTGTTTAGGG
ATCGTTACAATGTTATCCATCAACGTCTGCTTCGGCATGAGTCATTCCAA
TCACCGTCCGGTCCCTCGCGTATCTTGCGGAAATCATCATCTTCTTTAGC
GGTTACCCAAGGCTACAAGCTCACACCAATCGCGAATTTACTCGGAAGAA
ATGGCACATCACACCTTATTCTAGGTTTACTCTCAATGTCCCCAACGGGG
GACTTGAATTTGAGCGATTTAACCGGGAGTATTTCTTTGGATCTGAGACA
CGCGCGGATGGTGCCTGAAGACGGAGCCTGGCTCGCTCCAGGGATGTTTG
TCCTCGTTGATGGGATATATGAGGAAGAGGAAAATGTTAGGGGGTCTACT
CTAGGCGGCAATTCCGGGGTCGGGGGTGCCATTGGAGGAGTTTTTGTGGG
CGTTTCTATATGCGGTCCTCCTTGTGAGCGACGGGAGACATCTCTCGGGA
TGAACAACCAACAAAGTGGCAGAGAGGTCAGTTCCAGTGGGGGGCTTGGA
TGGATTGACTTCCTGGGAGTTGGAAGTGAACGTGCGCAGGGCCCGCGAAT
GAGGCATATTGAAACCAGCTATCTACGAGGTGTACACGGAAGCGCTGAAG
GCGACCGCCGGTTAAAGGTGGCTGCTTTGGGGGAGGTTAATCTGGATGAT
ATGAGGACTTTAGATGCGTTGAGGAAGGTCTTCAGCGTCTATCACCACTT
GCCTTTGGAGGAGCGTCCAAGCATATTTGTCCTGACGGGGAACTTCGTGC
AAAAAGCCATCATAAACAGCAGTGGCCAGGCGGGCAGCATCGAGTACAAA
GAACATTTCGATGCTCTCTCCTTGATACTGTCGGAGTTCCCTTCGTTGTT
GCAGCACTCGACATTCGTATTTGTTCCGGGCGACAATGATCCATGGCCGT
CGGCTTTCTCAGCTGGCGCCGCCTCCCCAATCCCACGCCATTCGATTCCA
GAATTATTCACTACTAGAGTGAAACGAGCATTTGCTACTGCCAACTCGCA
GTTGGACTCCTCTCAGCCGTCTGGGCCTCCTGGGGAAGCGATATGGACTT
CAAATCCTTCCCGCCTTACCCTATTCGGGCCTGTCCATGATATTGCGATA
TTCAGAGACGATATTTCTAACAGATTGAGACGAAACGCTGTAAACCTCTC
ACATGGCGCCGACACCGCGATGGCTGAAGACGCGCACGCTTCTGCCGGGG
AAACCGACCATCTCGAACCTCACAGCCATAGCCCACAGACAGGCATAAGC
TCTAGTCTAGTCCCGAGTACAACCCTTTTCGCTCGAAGGCTTGTGAAATC
GATTCTCGACCAGGGCACTTTGTCGCCTTTCCCGCTTTCTTTGCGACCCG
TTTTGTGGGATTATGTCTCCTCCTTACAGCTGTATCCGTTGCCAACTGCA
ATCATTCTAGCAGATCCAGAGGCCGCGCCGTTTTGTATAACGTATGAGGG
CTGCCATGTGATGAATACTGGCAGGCTTGTTCCGGAAGGCGAGCTATCCT
TTGTCCGGTGGGTTGAGTATGATGCCATCAAGAATCGAGGCAGGATACAG
CAGGAACGCTTGTAGCTGGGAAGTACGTAACGGAACTTATGCACTAAGTG
CTAGAAACAGATATTTAATTCTTGCGAGGTTAGGGACATGGTGTTATGTA
GATATACATTTTTGTTTTGACGTACAATGAACTATTACATTCG
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Coding sequence (CDS) from alignment at ch4:2571835..2574477+

>KJC3_005385-T1 ID=KJC3_005385-T1|Name=KJC3_005385-T1|organism=Aspergillus niger KJC3|type=CDS|length=2247bp|location=Sequence derived from alignment at ch4:2571835..2574477+ (Aspergillus niger KJC3)
ATGGACTCGGACCCCGTACCCTCATCATCACCCGGATTTGGAACACCCGC
CTATCCTTTCCGAAAAAATAGACCCAATGCGCTGCCAACGAGGACATCGG
TCCTTCCCATACTGCTTCCTCCTTCGACACTTCGGCCTGTGGCCTTCCGT
ACCTTCACGCGCAAGCATAATCTAACAATATCCTCCTCTGCGCTTCAAAC
ACTAGCCACCTTTGTGGGGAAGAATTGTGGCTCAGCATGGCGCGAAGAAG
GTCTCGCAGAAAGAGCACTCGATGAAGTGGCTAAAGCCTGGAAGAAAGCT
GGCGGTGGCGTCATTGTCGATGAAGGGAAAGGCGCCTCACTGAAAGCCAT
CCTCCAGACTTTAGAGAGCAATATGAGTGGGGGAAGGGTTATCTCTGGGA
AGCACGCCACGCCAGATGAGGTCCCTTCGAGAACAACAAGCCCAGGCCAA
GGAAACAGACGCTCTAGGGCCGATCCGCAATTGTATGCAGCGGCAGGGCT
GGAAGGAGAAGGTGCAGCAGAAAATTCTGACGTACCCTCACACCCGAGAC
ATTGGGTTAGGGTTATCGAGGCTTTTGATATACCGCGATTGACCTATAAT
GCGGATAAGAGATACTTCGAAGTCGCAAGATCAAGGCCCACTCTGTTCCC
TCCATCCTCTCACAGGACCAATCTGTTTAGGGATCGTTACAATGTTATCC
ATCAACGTCTGCTTCGGCATGAGTCATTCCAATCACCGTCCGGTCCCTCG
CGTATCTTGCGGAAATCATCATCTTCTTTAGCGGTTACCCAAGGCTACAA
GCTCACACCAATCGCGAATTTACTCGGAAGAAATGGCACATCACACCTTA
TTCTAGGTTTACTCTCAATGTCCCCAACGGGGGACTTGAATTTGAGCGAT
TTAACCGGGAGTATTTCTTTGGATCTGAGACACGCGCGGATGGTGCCTGA
AGACGGAGCCTGGCTCGCTCCAGGGATGTTTGTCCTCGTTGATGGGATAT
ATGAGGAAGAGGAAAATGTTAGGGGGTCTACTCTAGGCGGCAATTCCGGG
GTCGGGGGTGCCATTGGAGGAGTTTTTGTGGGCGTTTCTATATGCGGTCC
TCCTTGTGAGCGACGGGAGACATCTCTCGGGATGAACAACCAACAAAGTG
GCAGAGAGGTCAGTTCCAGTGGGGGGCTTGGATGGATTGACTTCCTGGGA
GTTGGAAGTGAACGTGCGCAGGGCCCGCGAATGAGGCATATTGAAACCAG
CTATCTACGAGGTGTACACGGAAGCGCTGAAGGCGACCGCCGGTTAAAGG
TGGCTGCTTTGGGGGAGGTTAATCTGGATGATATGAGGACTTTAGATGCG
TTGAGGAAGGTCTTCAGCGTCTATCACCACTTGCCTTTGGAGGAGCGTCC
AAGCATATTTGTCCTGACGGGGAACTTCGTGCAAAAAGCCATCATAAACA
GCAGTGGCCAGGCGGGCAGCATCGAGTACAAAGAACATTTCGATGCTCTC
TCCTTGATACTGTCGGAGTTCCCTTCGTTGTTGCAGCACTCGACATTCGT
ATTTGTTCCGGGCGACAATGATCCATGGCCGTCGGCTTTCTCAGCTGGCG
CCGCCTCCCCAATCCCACGCCATTCGATTCCAGAATTATTCACTACTAGA
GTGAAACGAGCATTTGCTACTGCCAACTCGCAGTTGGACTCCTCTCAGCC
GTCTGGGCCTCCTGGGGAAGCGATATGGACTTCAAATCCTTCCCGCCTTA
CCCTATTCGGGCCTGTCCATGATATTGCGATATTCAGAGACGATATTTCT
AACAGATTGAGACGAAACGCTGTAAACCTCTCACATGGCGCCGACACCGC
GATGGCTGAAGACGCGCACGCTTCTGCCGGGGAAACCGACCATCTCGAAC
CTCACAGCCATAGCCCACAGACAGGCATAAGCTCTAGTCTAGTCCCGAGT
ACAACCCTTTTCGCTCGAAGGCTTGTGAAATCGATTCTCGACCAGGGCAC
TTTGTCGCCTTTCCCGCTTTCTTTGCGACCCGTTTTGTGGGATTATGTCT
CCTCCTTACAGCTGTATCCGTTGCCAACTGCAATCATTCTAGCAGATCCA
GAGGCCGCGCCGTTTTGTATAACGTATGAGGGCTGCCATGTGATGAATAC
TGGCAGGCTTGTTCCGGAAGGCGAGCTATCCTTTGTCCGGTGGGTTGAGT
ATGATGCCATCAAGAATCGAGGCAGGATACAGCAGGAACGCTTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005385KJC3_005385Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005385-T1KJC3_005385-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005385-T1.utr5p1KJC3_005385-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_005385-T1.utr5p2KJC3_005385-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005385-T1.exon1KJC3_005385-T1.exon1Aspergillus niger KJC3exon
KJC3_005385-T1.exon2KJC3_005385-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005385-T1.cdsKJC3_005385-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005385-T1.utr3p1KJC3_005385-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007185
DBxrefPFAM:PF04042
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2571835..2574477 +
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