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KJC3_005389-T1, KJC3_005389-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005389-T1
Unique NameKJC3_005389-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2584958..2586713-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005389-T1 ID=KJC3_005389-T1|Name=KJC3_005389-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1756bp|location=Sequence derived from alignment at ch4:2584958..2586713- (Aspergillus niger KJC3)
CTCCGCTGCGGCTGGAAGGGTCTCTTGAGTATCCATTCTCATGCATTATC
TCCTGAGAATTCGACCTATACGAAGGATATTGTCACCCAGGTGAGTCCAT
TGCATCTGTGAAGGGCTTAACCTGTCCTTCTTTTTCGCTTCTTCATCCTT
TCTCTTTCCTGGTCTATTTTACCCTCACCTCATCTTTGAGAACTTTCAAG
ATCCCTTCCTAAATTCGTTTTCGCTACTTCATCCTCTGATTCGTCTCACT
GCTTCTTCCCAATCGATTTCTCTGGCCCCATTTTCGCGAGAGAGACTTTC
TCACAATCACCTACGAAAGGCAACACACGATTGTCGGAAGCATGGCCGGT
AGAGCAGGCATGAAACGTGATGCTAATCATTTGACGACACCAGAGGCCGA
TTCAAAGAAACCCAAGGCCAATGGAAGCATCACTTCATTCTTTGGTGCCC
CCAAGAACAAGTCCAGCGACTCAAAGGCCACTTCGTCTTCATCGGCCTTT
AATAAGCAGAAATGGGTCGACTCATTGACTTCAGAACAAAAGGAGCTCCT
TCAACTTGAGATTGACACTCTTGATGAGAGCTGGCTGGCACAGCTCAAGG
AGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCGCTTCCTCCAGAAG
GAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCGAAGAAGATATCTACTC
ATGGTAAATCCCCATTGTCTCCCATTTTGGCTCTACAATTATTATAGCAA
TTGGGGCAGCTAATCTTGAATACTAGGTCCCGTCATACACCTCTCCACAA
GGTGAAGGTGGTCATCGTCGGCCAAGATCCTTATCATAATTATAACCAGG
CCCATGGCCTTGCATTCTCCGTCCGCCCTCCAACTCCTGCCCCGCCTTCC
CTCGTCAACATCTTTAACGAAATTCATAATGACTATCCTTCTTTCCAAAG
ACCCGCAAACAAGGGTGGCCTTCTCATACCCTGGGCTGAGCGTGGTGTAC
TGATGCTCAACACTTGCTTGACCGTACGCGCGCATCAAGCCGCTAGCCAT
TCAAACAAGGGCTGGGAACTGTTCACGCAGAAAGCCATAGACTTAGTGGC
CCGAGTACGGACGCGCGGTGTTGTTTTCCTTGCATGGGGAACACCCGCAG
GGAAGCGCGTGACAGGCATCAATAGAGCAAAGCATTATGTTCTGCAATCG
GTCCACCCAAGCCCGCTAAGTGCGTCAAGAGGATTCGTAAGTAGACCCTT
GTTATCATCATTCATTGGCCATCTAATTTTGACGTTTGGTTGTTTTGTAG
TTCGGAAACCAGCATTTCAAAAAATGTAATGAGTGGCTTGCTGAACGTTA
TGGTGCCGACGAAGTCATTGACTGGTCATTGACTTCGAAGAGCAAAACCA
GCTCTCCTTTTGCCACCATTCAAAGCCCCGCTCTCACTGGTGCCCCGAAT
AAGCCTATCGCTAAAGGGTCAGATGCTAGTTTGGAGGAAGAGGTCTCCAG
GACAACAGAGCCTGCCAAGTCCACCGAGGCCGTTGACGAGTTTGAAGACG
ATCTCGATGCGCTGGAAGCCCTAGCAGCAGCAGAAGCGACCAGATAGTTG
CTAATACTGAGTACATTGTAAGAATTCCAGGTCTCTTTCCTTCATTGCCA
TCTCCATTTCCACCTTCTCATACCTTGAGGGGAGCTATTAGAGCAAAGTC
GTGATCGAGATCAAGCCACCGTTCTTGCTCATGGATCACGGTATTATTCA
CCGCAT
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Coding sequence (CDS) from alignment at ch4:2584958..2586713-

>KJC3_005389-T1 ID=KJC3_005389-T1|Name=KJC3_005389-T1|organism=Aspergillus niger KJC3|type=CDS|length=3357bp|location=Sequence derived from alignment at ch4:2584958..2586713- (Aspergillus niger KJC3)
TTCGGAAACCAGCATTTCAAAAAATGTAATGAGTGGCTTGCTGAACGTTA
TGGTGCCGACGAAGTCATTGACTGGTCATTGACTTCGAAGAGCAAAACCA
GCTCTCCTTTTGCCACCATTCAAAGCCCCGCTCTCACTGGTGCCCCGAAT
AAGCCTATCGCTAAAGGGTCAGATGCTAGTTTGGAGGAAGAGGTCTCCAG
GACAACAGAGCCTGCCAAGTCCACCGAGGCCGTTGACGAGTTTGAAGACG
ATCTCGATGCGCTGGAAGCCCTAGCAGCAGCAGAAGCGACCAGATAGGTC
CCGTCATACACCTCTCCACAAGGTGAAGGTGGTCATCGTCGGCCAAGATC
CTTATCATAATTATAACCAGGCCCATGGCCTTGCATTCTCCGTCCGCCCT
CCAACTCCTGCCCCGCCTTCCCTCGTCAACATCTTTAACGAAATTCATAA
TGACTATCCTTCTTTCCAAAGACCCGCAAACAAGGGTGGCCTTCTCATAC
CCTGGGCTGAGCGTGGTGTACTGATGCTCAACACTTGCTTGACCGTACGC
GCGCATCAAGCCGCTAGCCATTCAAACAAGGGCTGGGAACTGTTCACGCA
GAAAGCCATAGACTTAGTGGCCCGAGTACGGACGCGCGGTGTTGTTTTCC
TTGCATGGGGAACACCCGCAGGGAAGCGCGTGACAGGCATCAATAGAGCA
AAGCATTATGTTCTGCAATCGGTCCACCCAAGCCCGCTAAGTGCGTCAAG
AGGATTCATGGCCGGTAGAGCAGGCATGAAACGTGATGCTAATCATTTGA
CGACACCAGAGGCCGATTCAAAGAAACCCAAGGCCAATGGAAGCATCACT
TCATTCTTTGGTGCCCCCAAGAACAAGTCCAGCGACTCAAAGGCCACTTC
GTCTTCATCGGCCTTTAATAAGCAGAAATGGGTCGACTCATTGACTTCAG
AACAAAAGGAGCTCCTTCAACTTGAGATTGACACTCTTGATGAGAGCTGG
CTGGCACAGCTCAAGGAGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAA
GCGCTTCCTCCAGAAGGAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCG
AAGAAGATATCTACTCATGTTCGGAAACCAGCATTTCAAAAAATGTAATG
AGTGGCTTGCTGAACGTTATGGTGCCGACGAAGTCATTGACTGGTCATTG
ACTTCGAAGAGCAAAACCAGCTCTCCTTTTGCCACCATTCAAAGCCCCGC
TCTCACTGGTGCCCCGAATAAGCCTATCGCTAAAGGGTCAGATGCTAGTT
TGGAGGAAGAGGTCTCCAGGACAACAGAGCCTGCCAAGTCCACCGAGGCC
GTTGACGAGTTTGAAGACGATCTCGATGCGCTGGAAGCCCTAGCAGCAGC
AGAAGCGACCAGATAGGTCCCGTCATACACCTCTCCACAAGGTGAAGGTG
GTCATCGTCGGCCAAGATCCTTATCATAATTATAACCAGGCCCATGGCCT
TGCATTCTCCGTCCGCCCTCCAACTCCTGCCCCGCCTTCCCTCGTCAACA
TCTTTAACGAAATTCATAATGACTATCCTTCTTTCCAAAGACCCGCAAAC
AAGGGTGGCCTTCTCATACCCTGGGCTGAGCGTGGTGTACTGATGCTCAA
CACTTGCTTGACCGTACGCGCGCATCAAGCCGCTAGCCATTCAAACAAGG
GCTGGGAACTGTTCACGCAGAAAGCCATAGACTTAGTGGCCCGAGTACGG
ACGCGCGGTGTTGTTTTCCTTGCATGGGGAACACCCGCAGGGAAGCGCGT
GACAGGCATCAATAGAGCAAAGCATTATGTTCTGCAATCGGTCCACCCAA
GCCCGCTAAGTGCGTCAAGAGGATTCATGGCCGGTAGAGCAGGCATGAAA
CGTGATGCTAATCATTTGACGACACCAGAGGCCGATTCAAAGAAACCCAA
GGCCAATGGAAGCATCACTTCATTCTTTGGTGCCCCCAAGAACAAGTCCA
GCGACTCAAAGGCCACTTCGTCTTCATCGGCCTTTAATAAGCAGAAATGG
GTCGACTCATTGACTTCAGAACAAAAGGAGCTCCTTCAACTTGAGATTGA
CACTCTTGATGAGAGCTGGCTGGCACAGCTCAAGGAGGAAGTCGTCAAGC
CTGAGTTCCTGGCCCTGAAGCGCTTCCTCCAGAAGGAAAAGCAATCGGGA
GCTAAAATCTTTCCTCCCGAAGAAGATATCTACTCATGTTCGGAAACCAG
CATTTCAAAAAATGTAATGAGTGGCTTGCTGAACGTTATGGTGCCGACGA
AGTCATTGACTGGTCATTGACTTCGAAGAGCAAAACCAGCTCTCCTTTTG
CCACCATTCAAAGCCCCGCTCTCACTGGTGCCCCGAATAAGCCTATCGCT
AAAGGGTCAGATGCTAGTTTGGAGGAAGAGGTCTCCAGGACAACAGAGCC
TGCCAAGTCCACCGAGGCCGTTGACGAGTTTGAAGACGATCTCGATGCGC
TGGAAGCCCTAGCAGCAGCAGAAGCGACCAGATAGGTCCCGTCATACACC
TCTCCACAAGGTGAAGGTGGTCATCGTCGGCCAAGATCCTTATCATAATT
ATAACCAGGCCCATGGCCTTGCATTCTCCGTCCGCCCTCCAACTCCTGCC
CCGCCTTCCCTCGTCAACATCTTTAACGAAATTCATAATGACTATCCTTC
TTTCCAAAGACCCGCAAACAAGGGTGGCCTTCTCATACCCTGGGCTGAGC
GTGGTGTACTGATGCTCAACACTTGCTTGACCGTACGCGCGCATCAAGCC
GCTAGCCATTCAAACAAGGGCTGGGAACTGTTCACGCAGAAAGCCATAGA
CTTAGTGGCCCGAGTACGGACGCGCGGTGTTGTTTTCCTTGCATGGGGAA
CACCCGCAGGGAAGCGCGTGACAGGCATCAATAGAGCAAAGCATTATGTT
CTGCAATCGGTCCACCCAAGCCCGCTAAGTGCGTCAAGAGGATTCATGGC
CGGTAGAGCAGGCATGAAACGTGATGCTAATCATTTGACGACACCAGAGG
CCGATTCAAAGAAACCCAAGGCCAATGGAAGCATCACTTCATTCTTTGGT
GCCCCCAAGAACAAGTCCAGCGACTCAAAGGCCACTTCGTCTTCATCGGC
CTTTAATAAGCAGAAATGGGTCGACTCATTGACTTCAGAACAAAAGGAGC
TCCTTCAACTTGAGATTGACACTCTTGATGAGAGCTGGCTGGCACAGCTC
AAGGAGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCGCTTCCTCCA
GAAGGAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCGAAGAAGATATCT
ACTCATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0004844uracil DNA N-glycosylase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006284base-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005389KJC3_005389Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005389-T1KJC3_005389-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005389-T1.cdsKJC3_005389-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005389-T1.utr3p1KJC3_005389-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005389-T1.exon3KJC3_005389-T1.exon3Aspergillus niger KJC3exon
KJC3_005389-T1.exon2KJC3_005389-T1.exon2Aspergillus niger KJC3exon
KJC3_005389-T1.exon1KJC3_005389-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005389-T1.utr5p1KJC3_005389-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264GMT
DBxrefInterPro:IPR018085
DBxrefInterPro:IPR002043
DBxrefInterPro:IPR036895
DBxrefInterPro:IPR005122
DBxrefPFAM:PF03167
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2584958..2586713 -
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