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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2602529..2606139+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005397-T1 ID=KJC3_005397-T1|Name=KJC3_005397-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3611bp|location=Sequence derived from alignment at ch4:2602529..2606139+ (Aspergillus niger KJC3)
CTCGGGCTGTAAGTCGCAGGTAACTTTAGTAGAGAGAAACAGAGAGGCAG
CTACTCACTCTATCCATCTCATCTTTCCTTTCACTCATCACTTCCCCCCT
CCCTCTTCTCTTCCTCCCCCCCTCTCCCCTCCCCCCATCTTCCTTGGAGT
CTGATTGTCTCCATCCAACATTCGTTCTGCATGGTTCTTTCTTTCTCTTC
CCTTGTCGTCGCTCATCCATCAGTTTGAATCTGTTAGCCAGCATCTGTCC
CTTTCGCGCGTTTCCACTCCTTACTCACACCACCCTATCACTCACTTTCT
CTGCCTAGCCGCGCGCTCTCCTCAACCCACCCCCCTTTTCTTCAGTCTTT
AGAGTCGAGCACCTATTCTCTTCTCTCGTGCAGGCAATCAATTGTTTGCC
CGCAAGACTCTCTTTCCTCAATCCTCTCTGCCCCCTCCATGTATCGCGCT
CTCCTGCCTTCACTCCCTTGACGTTTGCGACGGACAGTGAGTGACACAAG
TCAGTGAGAGGGTGTGGGTGCGGTCCTCACACTCTTTGGAACAGCATCCC
CTCTCGTGGCTTGCTTGGATATCTTGTATTGCGGTTCTGCACACTCTTTC
GAGCATCTGTTTGCAGCTCCAACAGTTTGATTCACCCTCTTTAAGCGTTT
TCATTCTACACAGGTTGATCCTGTCAACAATCTCCGTATCATCAGGCGAG
CCTAGTTGCTGCGATCTTGATCGGCGATTCAAATATACTCGCGCCAAATA
TACCCTTATAATCGTCGCCAATCTCTCGGAAAGAAAAGCTTTCTTGTCTG
CATAAGCTCTGAAGATTTTCTTGATGCTGGCACCTTGAATCTTCACAGCC
TTGAGTAACATCACCCATCAATTGTCAATATGCGGCTCATTCCTTCTTTT
TCGACCCTTACGGCGCTGGGTCTCCTGGCCACTCGAGCCCTCGCTGCCGA
TACCCTCAGCACCAATGGTCTGACAACTTGTATGTCAGACTCTGCTATCC
AAGTCGACAAACTATCCGTCACCTATACCCGTTCTACTAGAGAAATCGTC
TTCGATGTTTCCGGCACCAATGGGGTAGAACAGAATGTCACGGCAATCTT
GACCATCTATGCCTACGGCAGTCAACTCTACTCCGAAACGTTCGACCCGT
GCAGCAGCAAATACTACGTGGAGCAACTCTGTCCCGTGGCTGCCGGTAGC
TTCTCCGCGACTGGCACGCAGACCCTACCTGAATCGATCGCTAGTGAAAT
CCCCTCCATCGCCTTCGCCATCCCAGACTTGGATGGCCAAGTGAAGCTTC
AATTGCTGTCCAAGACCGACAATGACGAGCTGGCATGCATCCAATCGGAA
CTGACCAACGGCAATACTATGCAGATCGCTGGTGTATCCTATGCTGCTGC
TGGTGTGGCTGGTGCGGCATTGGCCGTGAGCGGGCTGTCAGCTCTGGGTG
CTGTTGGCCACCCTGGTGCCGTCTCATCTAGTCCCAGCTTTGGTGATGTC
GTGAGTTGGTTTCACACTATGGCCACTAATGGAATGCTCAGTGTCAGCTA
CCCGACGGTGTACCGCAGCTTTTCGAAGAACTTTGCCTTCAGCACGGGTT
TGATTCCTTGGGGTCAAATGCAGGAGTCCATCGATAACTTCCGGAAGTCG
ACCGGCGGCAATCTCACCGACAACAGCTACCAGTATCTTCTCAATGCCAC
GCTCGTGTACTCTGACGGCACGAATTCTAGCTCAAAGTCGAAGCGAGGAC
TGGATCTGGTCACAGGCATGGCTAACCTAGCTGCGCGCGAGGTCTCGACT
TCGTATAGCAGCAATACTACTTCGTCGTCTAACAGCACCAGTGACGACAG
CAGTAGTTTCGAACATTTCGTCTCCGGAATTGAGGCCTATGCCGAACAGT
TGACCATCCCTCAAGCCAACACCTTCATGACCGTTCTGCTCATTTTCGCT
ATCCTAATTGCCGCTATTGCCGTTGGCATCTTGTTGCTCAAGGTCATCCT
CGAAGTTTGGGCGCTCTACGGCTCTTTCCCGGACAAACTCACCAACTTCC
GCAAAGACTACTGGGGTCTCCTGGGTCGCACAATTACCAACTTGATTCTG
CTGCTGTACGGCGTTTGGGTGATTTGGTGTGTCTATCAGCTCAGCAGTGG
GGATTCGTGGGCGGCGAAGCTCTTGGCTGCTGTGGCGCTTACAGTTTTCA
CGGCTGTGTTATTGTACTTTGGTCTCAAGATCATGTTCGTGGCTCGGAAG
TACAAGAAGACTGAAGGTGATGCGTCCCATTTGTACGACAACGATGAAAC
CTGGCGCAAGTACAGTCTTTTCTACGACAACTACAAAAAGGACTACTGGT
GGGCATTCGTCCCTGCCATTGTATACATGTTTGCCAAGGGTTGCGTCATT
GCTGCTGGAGATGGTCATGGGCTTGCCCAAAGCGCTGGCCAACTCATCGT
GGAGGCTCTCATGCTCACCCTTTTGCTGTGGAACCGTCCGTACGTTGCCA
AGTCTAGCCAGTGGATCAACATTTCAGTCCAGGTGGTTCGTGTCTTGTCA
ATCGCGTGTGTGTTGATCTTCGTCGACGAGCTGGGGCTCTCGGAGACGAC
CAAAACTGTCACCGGCATTGTCCTCATTGCTATTCAGTCGGGACTGAGTG
GTATCTTGGCCATTCTTATTGCCACCAACGCCATTATCCTCTGCATTCGC
GAGAACCCTCATGCTAAACGGAAGAGGGAAGCTAGTAAGTGAATTGGCCA
CTGTGTTCGACACTCTTTGGGTTGCTGACTATTGTGTTACCAGACAAAAT
GAATCGTGATCTCGATGATTTGACCCCTCTTGACGCCCGTGAATCTCTGC
TCATGGAGCATCCTCCTCGCAAGGATTACGCTGAAATGAGCAAGTTCAAC
TTTACCGGTCCTTACGAACCATACCGGGATCAACATGATTCGAAATCGCG
ACACAGCCCTACAGGTAGCACGGATCGGCTGGTTGATTCAAGCTACCCTC
TTGAAGACGTCAATGGTCGAAGTATAAGTCGAGAAAGCCGCCGAAGCCAT
GACAGTCATGGCAGCCATGAAAACCCTGAAAAGCACCATGCCACGACCCC
GGGTTATGGGTTCGCTTACTGAAGCCCGTTTGCGCTGGATGGCACTTGAC
GACGTACCAATATTTTCTTTTCTCGACCCCACATTCATCTTAAATATTGA
ACATAGAATTTTTGTGTCAGGTAAATTTGACGAATTTAGCGTACTTGATT
TGGTTGATGGTGGATCTTGGTATTTATTGTGTTTTTGTTACGCCGCTCCT
TTCTCCCTCTCTGACTCTCTTACTACCCTTTGTTTACTCTTCTGTTCTTG
TCCTATTTGATTCCCATCATGCCATTACCATACATACCTAGTTTAGGCTT
TCAGGCTTTCTTGTAAATCGGCGCTCATAGGGGGTTGCTCCTACGCATTA
TCTTGACTCCGTTATTGTGGATGGGCTGCGGGGAAAGAATCCATTGACAG
GACGCGCAAGCTGCATTCTTTGCTCACACACTCAGCCGGATTTGAGGGTG
CTGAGACCTACATCTTGTACTAGAAAGATAGAAGTTCGAATGAAAGCATT
CAATCTACTTA back to topCoding sequence (CDS) from alignment at ch4:2602529..2606139+ >KJC3_005397-T1 ID=KJC3_005397-T1|Name=KJC3_005397-T1|organism=Aspergillus niger KJC3|type=CDS|length=4368bp|location=Sequence derived from alignment at ch4:2602529..2606139+ (Aspergillus niger KJC3)
ATGCGGCTCATTCCTTCTTTTTCGACCCTTACGGCGCTGGGTCTCCTGGC
CACTCGAGCCCTCGCTGCCGATACCCTCAGCACCAATGGTCTGACAACTT
GTATGTCAGACTCTGCTATCCAAGTCGACAAACTATCCGTCACCTATACC
CGTTCTACTAGAGAAATCGTCTTCGATGTTTCCGGCACCAATGGGGTAGA
ACAGAATGTCACGGCAATCTTGACCATCTATGCCTACGGCAGTCAACTCT
ACTCCGAAACGTTCGACCCGTGCAGCAGCAAATACTACGTGGAGCAACTC
TGTCCCGTGGCTGCCGGTAGCTTCTCCGCGACTGGCACGCAGACCCTACC
TGAATCGATCGCTAGTGAAATCCCCTCCATCGCCTTCGCCATCCCAGACT
TGGATGGCCAAGTGAAGCTTCAATTGCTGTCCAAGACCGACAATGACGAG
CTGGCATGCATCCAATCGGAACTGACCAACGGCAATACTATGCAGATCGC
TGGTGTATCCTATGCTGCTGCTGGTGTGGCTGGTGCGGCATTGGCCGTGA
GCGGGCTGTCAGCTCTGGGTGCTGTTGGCCACCCTGGTGCCGTCTCATCT
AGTCCCAGCTTTGGTGATGTCGTGAGTTGGTTTCACACTATGGCCACTAA
TGGAATGCTCAGTGTCAGCTACCCGACGGTGTACCGCAGCTTTTCGAAGA
ACTTTGCCTTCAGCACGGGTTTGATTCCTTGGGGTCAAATGCAGGAGTCC
ATCGATAACTTCCGGAAGTCGACCGGCGGCAATCTCACCGACAACAGCTA
CCAGTATCTTCTCAATGCCACGCTCGTGTACTCTGACGGCACGAATTCTA
GCTCAAAGTCGAAGCGAGGACTGGATCTGGTCACAGGCATGGCTAACCTA
GCTGCGCGCGAGGTCTCGACTTCGTATAGCAGCAATACTACTTCGTCGTC
TAACAGCACCAGTGACGACAGCAGTAGTTTCGAACATTTCGTCTCCGGAA
TTGAGGCCTATGCCGAACAGTTGACCATCCCTCAAGCCAACACCTTCATG
ACCGTTCTGCTCATTTTCGCTATCCTAATTGCCGCTATTGCCGTTGGCAT
CTTGTTGCTCAAGGTCATCCTCGAAGTTTGGGCGCTCTACGGCTCTTTCC
CGGACAAACTCACCAACTTCCGCAAAGACTACTGGGGTCTCCTGGGTCGC
ACAATTACCAACTTGATTCTGCTGCTGTACGGCGTTTGGGTGATTTGGTG
TGTCTATCAGCTCAGCAGTGGGGATTCGTGGGCGGCGAAGCTCTTGGCTG
CTGTGGCGCTTACAGTTTTCACGGCTGTGTTATTGTACTTTGGTCTCAAG
ATCATGTTCGTGGCTCGGAAGTACAAGAAGACTGAAGGTGATGCGTCCCA
TTTGTACGACAACGATGAAACCTGGCGCAAGTACAGTCTTTTCTACGACA
ACTACAAAAAGGACTACTGGTGGGCATTCGTCCCTGCCATTGTATACATG
TTTGCCAAGGGTTGCGTCATTGCTGCTGGAGATGGTCATGGGCTTGCCCA
AAGCGCTGGCCAACTCATCGTGGAGGCTCTCATGCTCACCCTTTTGCTGT
GGAACCGTCCGTACGTTGCCAAGTCTAGCCAGTGGATCAACATTTCAGTC
CAGGTGGTTCGTGTCTTGTCAATCGCGTGTGTGTTGATCTTCGTCGACGA
GCTGGGGCTCTCGGAGACGACCAAAACTGTCACCGGCATTGTCCTCATTG
CTATTCAGTCGGGACTGAGTGGTATCTTGGCCATTCTTATTGCCACCAAC
GCCATTATCCTCTGCATTCGCGAGAACCCTCATGCTAAACGGAAGAGGGA
AGCTAACAAAATGAATCGTGATCTCGATGATTTGACCCCTCTTGACGCCC
GTGAATCTCTGCTCATGGAGCATCCTCCTCGCAAGGATTACGCTGAAATG
AGCAAGTTCAACTTTACCGGTCCTTACGAACCATACCGGGATCAACATGA
TTCGAAATCGCGACACAGCCCTACAGGTAGCACGGATCGGCTGGTTGATT
CAAGCTACCCTCTTGAAGACGTCAATGGTCGAAGTATAAGTCGAGAAAGC
CGCCGAAGCCATGACAGTCATGGCAGCCATGAAAACCCTGAAAAGCACCA
TGCCACGACCCCGGGTTATGGGTTCGCTTACTGAATGCGGCTCATTCCTT
CTTTTTCGACCCTTACGGCGCTGGGTCTCCTGGCCACTCGAGCCCTCGCT
GCCGATACCCTCAGCACCAATGGTCTGACAACTTGTATGTCAGACTCTGC
TATCCAAGTCGACAAACTATCCGTCACCTATACCCGTTCTACTAGAGAAA
TCGTCTTCGATGTTTCCGGCACCAATGGGGTAGAACAGAATGTCACGGCA
ATCTTGACCATCTATGCCTACGGCAGTCAACTCTACTCCGAAACGTTCGA
CCCGTGCAGCAGCAAATACTACGTGGAGCAACTCTGTCCCGTGGCTGCCG
GTAGCTTCTCCGCGACTGGCACGCAGACCCTACCTGAATCGATCGCTAGT
GAAATCCCCTCCATCGCCTTCGCCATCCCAGACTTGGATGGCCAAGTGAA
GCTTCAATTGCTGTCCAAGACCGACAATGACGAGCTGGCATGCATCCAAT
CGGAACTGACCAACGGCAATACTATGCAGATCGCTGGTGTATCCTATGCT
GCTGCTGGTGTGGCTGGTGCGGCATTGGCCGTGAGCGGGCTGTCAGCTCT
GGGTGCTGTTGGCCACCCTGGTGCCGTCTCATCTAGTCCCAGCTTTGGTG
ATGTCGTGAGTTGGTTTCACACTATGGCCACTAATGGAATGCTCAGTGTC
AGCTACCCGACGGTGTACCGCAGCTTTTCGAAGAACTTTGCCTTCAGCAC
GGGTTTGATTCCTTGGGGTCAAATGCAGGAGTCCATCGATAACTTCCGGA
AGTCGACCGGCGGCAATCTCACCGACAACAGCTACCAGTATCTTCTCAAT
GCCACGCTCGTGTACTCTGACGGCACGAATTCTAGCTCAAAGTCGAAGCG
AGGACTGGATCTGGTCACAGGCATGGCTAACCTAGCTGCGCGCGAGGTCT
CGACTTCGTATAGCAGCAATACTACTTCGTCGTCTAACAGCACCAGTGAC
GACAGCAGTAGTTTCGAACATTTCGTCTCCGGAATTGAGGCCTATGCCGA
ACAGTTGACCATCCCTCAAGCCAACACCTTCATGACCGTTCTGCTCATTT
TCGCTATCCTAATTGCCGCTATTGCCGTTGGCATCTTGTTGCTCAAGGTC
ATCCTCGAAGTTTGGGCGCTCTACGGCTCTTTCCCGGACAAACTCACCAA
CTTCCGCAAAGACTACTGGGGTCTCCTGGGTCGCACAATTACCAACTTGA
TTCTGCTGCTGTACGGCGTTTGGGTGATTTGGTGTGTCTATCAGCTCAGC
AGTGGGGATTCGTGGGCGGCGAAGCTCTTGGCTGCTGTGGCGCTTACAGT
TTTCACGGCTGTGTTATTGTACTTTGGTCTCAAGATCATGTTCGTGGCTC
GGAAGTACAAGAAGACTGAAGGTGATGCGTCCCATTTGTACGACAACGAT
GAAACCTGGCGCAAGTACAGTCTTTTCTACGACAACTACAAAAAGGACTA
CTGGTGGGCATTCGTCCCTGCCATTGTATACATGTTTGCCAAGGGTTGCG
TCATTGCTGCTGGAGATGGTCATGGGCTTGCCCAAAGCGCTGGCCAACTC
ATCGTGGAGGCTCTCATGCTCACCCTTTTGCTGTGGAACCGTCCGTACGT
TGCCAAGTCTAGCCAGTGGATCAACATTTCAGTCCAGGTGGTTCGTGTCT
TGTCAATCGCGTGTGTGTTGATCTTCGTCGACGAGCTGGGGCTCTCGGAG
ACGACCAAAACTGTCACCGGCATTGTCCTCATTGCTATTCAGTCGGGACT
GAGTGGTATCTTGGCCATTCTTATTGCCACCAACGCCATTATCCTCTGCA
TTCGCGAGAACCCTCATGCTAAACGGAAGAGGGAAGCTAACAAAATGAAT
CGTGATCTCGATGATTTGACCCCTCTTGACGCCCGTGAATCTCTGCTCAT
GGAGCATCCTCCTCGCAAGGATTACGCTGAAATGAGCAAGTTCAACTTTA
CCGGTCCTTACGAACCATACCGGGATCAACATGATTCGAAATCGCGACAC
AGCCCTACAGGTAGCACGGATCGGCTGGTTGATTCAAGCTACCCTCTTGA
AGACGTCAATGGTCGAAGTATAAGTCGAGAAAGCCGCCGAAGCCATGACA
GTCATGGCAGCCATGAAAACCCTGAAAAGCACCATGCCACGACCCCGGGT
TATGGGTTCGCTTACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005397-T1.utr5p1 | KJC3_005397-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005397-T1.utr3p1 | KJC3_005397-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-22) |
| DBxref | InterPro:IPR010308 |
| DBxref | InterPro:IPR032800 |
| DBxref | PFAM:PF14558 |
| DBxref | PFAM:PF06011 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2602529..2606139 + |
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