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KJC3_005400-T1, KJC3_005400-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005400-T1
Unique NameKJC3_005400-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2613598..2615018-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005400-T1 ID=KJC3_005400-T1|Name=KJC3_005400-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1421bp|location=Sequence derived from alignment at ch4:2613598..2615018- (Aspergillus niger KJC3)
GTGAGAGAGTGTGTGTTTGTGTGAGAGAAGAGAGAACCCATATAGAATTC
ACCCCTCTAAAAGGTTGTCTTGTCAGGATTCGGACTGCTCACTCAGAGGC
CTCGCGACTCAATCTGCCAGGATGCCCAAGGTCAAACAGCAGAAGCGCAA
TAGCGCTTCGAAGGCCAGTCCCTATGCCGATGCGGCGGCAAAGACGAAGG
CCGCCAACACCGTCTTCAAGATGAATACCGATCTCGGCCAGCACATTCTG
AAAAACCCTGGCGTGGCTCAACGAATTGTTGACAAAGCCGAGTTGAAACA
GAGCGATGTGAGTCGTCCACAAACTTGGCCCATGTACCTTACAGATTTGC
CTAACCTGGAGGGGCTATTTTTTTTAAATAGGTTGTTCTGGAAATTGGTC
CTGGTACCGGTAACTTGACCGTGAAGATCCTCGAACAGGCGAAAAAAGTT
ATCGCCGTTGAGCTCGACCCTCGAATGGCTGCCGAAGTCACCAAGCGTGT
TCAAGGCACGCCTGCCCAGAAACGCTTAGACGTTATCCTTGGAGATGTGA
TCAAAACAGACCTTCCATATTTCGATGTTTGCATCAGCAACACGCCGTAT
CAGGTACGCTCTATAAACTATCTATCTCTTCAAAGTGGAAGAAAGGCTAA
TTATTCGCCCGCTAGATCTCTTCTCCCCTCACATTTAAACTTCTCGCGAC
GTCTCCGGCGCCCCGCATTTGTGTTCTCATGTTTCAACGAGAATTTGCTC
TAAGGTTATTCGCGAAGCCGGGCGATAAGCTCTACAGTCGACTCTCCGTC
AATGCTCAGATGTGGGCTAAGATCGACCACATCATGAAGGTGGGCAAGAA
CAATTTCAAGCCCCCACCGCTGGTCGAGTCGAGCGTTGTCCGTCTGGTAC
CTAAGAACCCCAGGCCACAGATCAACTACGATGAGTGGGACGGGCTTCTG
AGAATTCTATTCGTCCGGAAGAACAAGACAATTCGGTCAAGTTTCCTTGG
CAAGTCCACGGTCATGGATATGTTGGAAGCCAACTATCGAACATGGTGTG
CGCAAAACGATATCCCAGTTGAGGATGGGCCGGCGGAAGGCGCCGAATCT
GATGCGATGGACATTGGCAACGCGCAAGATGAGGATGATGATGAGGGTGA
AGACGAGCCTGACGAGGGCATGGACGTGGACGACGAAGATGACGTACCCG
ACTTCTTCAAGGAACAGACGAACGCGCGTATTCAAGAGGCTCTTAAGAAT
CGGCCTAGTCGTAAGAAGAAGGGAAAGGTAGCAGAGCTCGTCCGGGAGAA
GGTACGGCAGGTGTTGGAAGATGAAACACGCCTTGCGGACAAGCGTGCAA
GGATGTGCGATGAGAACGACTTCCTGAAGTTATTGTGGGCCTTCAACCAG
AAGGGCTTCCATTTCAGCTGA
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Coding sequence (CDS) from alignment at ch4:2613598..2615018-

>KJC3_005400-T1 ID=KJC3_005400-T1|Name=KJC3_005400-T1|organism=Aspergillus niger KJC3|type=CDS|length=3492bp|location=Sequence derived from alignment at ch4:2613598..2615018- (Aspergillus niger KJC3)
ATCTCTTCTCCCCTCACATTTAAACTTCTCGCGACGTCTCCGGCGCCCCG
CATTTGTGTTCTCATGTTTCAACGAGAATTTGCTCTAAGGTTATTCGCGA
AGCCGGGCGATAAGCTCTACAGTCGACTCTCCGTCAATGCTCAGATGTGG
GCTAAGATCGACCACATCATGAAGGTGGGCAAGAACAATTTCAAGCCCCC
ACCGCTGGTCGAGTCGAGCGTTGTCCGTCTGGTACCTAAGAACCCCAGGC
CACAGATCAACTACGATGAGTGGGACGGGCTTCTGAGAATTCTATTCGTC
CGGAAGAACAAGACAATTCGGTCAAGTTTCCTTGGCAAGTCCACGGTCAT
GGATATGTTGGAAGCCAACTATCGAACATGGTGTGCGCAAAACGATATCC
CAGTTGAGGATGGGCCGGCGGAAGGCGCCGAATCTGATGCGATGGACATT
GGCAACGCGCAAGATGAGGATGATGATGAGGGTGAAGACGAGCCTGACGA
GGGCATGGACGTGGACGACGAAGATGACGTACCCGACTTCTTCAAGGAAC
AGACGAACGCGCGTATTCAAGAGGCTCTTAAGAATCGGCCTAGTCGTAAG
AAGAAGGGAAAGGTAGCAGAGCTCGTCCGGGAGAAGGTACGGCAGGTGTT
GGAAGATGAAACACGCCTTGCGGACAAGCGTGCAAGGATGTGCGATGAGA
ACGACTTCCTGAAGTTATTGTGGGCCTTCAACCAGAAGGGCTTCCATTTC
AGCTGAGTTGTTCTGGAAATTGGTCCTGGTACCGGTAACTTGACCGTGAA
GATCCTCGAACAGGCGAAAAAAGTTATCGCCGTTGAGCTCGACCCTCGAA
TGGCTGCCGAAGTCACCAAGCGTGTTCAAGGCACGCCTGCCCAGAAACGC
TTAGACGTTATCCTTGGAGATGTGATCAAAACAGACCTTCCATATTTCGA
TGTTTGCATCAGCAACACGCCGTATCAGATGCCCAAGGTCAAACAGCAGA
AGCGCAATAGCGCTTCGAAGGCCAGTCCCTATGCCGATGCGGCGGCAAAG
ACGAAGGCCGCCAACACCGTCTTCAAGATGAATACCGATCTCGGCCAGCA
CATTCTGAAAAACCCTGGCGTGGCTCAACGAATTGTTGACAAAGCCGAGT
TGAAACAGAGCGATATCTCTTCTCCCCTCACATTTAAACTTCTCGCGACG
TCTCCGGCGCCCCGCATTTGTGTTCTCATGTTTCAACGAGAATTTGCTCT
AAGGTTATTCGCGAAGCCGGGCGATAAGCTCTACAGTCGACTCTCCGTCA
ATGCTCAGATGTGGGCTAAGATCGACCACATCATGAAGGTGGGCAAGAAC
AATTTCAAGCCCCCACCGCTGGTCGAGTCGAGCGTTGTCCGTCTGGTACC
TAAGAACCCCAGGCCACAGATCAACTACGATGAGTGGGACGGGCTTCTGA
GAATTCTATTCGTCCGGAAGAACAAGACAATTCGGTCAAGTTTCCTTGGC
AAGTCCACGGTCATGGATATGTTGGAAGCCAACTATCGAACATGGTGTGC
GCAAAACGATATCCCAGTTGAGGATGGGCCGGCGGAAGGCGCCGAATCTG
ATGCGATGGACATTGGCAACGCGCAAGATGAGGATGATGATGAGGGTGAA
GACGAGCCTGACGAGGGCATGGACGTGGACGACGAAGATGACGTACCCGA
CTTCTTCAAGGAACAGACGAACGCGCGTATTCAAGAGGCTCTTAAGAATC
GGCCTAGTCGTAAGAAGAAGGGAAAGGTAGCAGAGCTCGTCCGGGAGAAG
GTACGGCAGGTGTTGGAAGATGAAACACGCCTTGCGGACAAGCGTGCAAG
GATGTGCGATGAGAACGACTTCCTGAAGTTATTGTGGGCCTTCAACCAGA
AGGGCTTCCATTTCAGCTGAGTTGTTCTGGAAATTGGTCCTGGTACCGGT
AACTTGACCGTGAAGATCCTCGAACAGGCGAAAAAAGTTATCGCCGTTGA
GCTCGACCCTCGAATGGCTGCCGAAGTCACCAAGCGTGTTCAAGGCACGC
CTGCCCAGAAACGCTTAGACGTTATCCTTGGAGATGTGATCAAAACAGAC
CTTCCATATTTCGATGTTTGCATCAGCAACACGCCGTATCAGATGCCCAA
GGTCAAACAGCAGAAGCGCAATAGCGCTTCGAAGGCCAGTCCCTATGCCG
ATGCGGCGGCAAAGACGAAGGCCGCCAACACCGTCTTCAAGATGAATACC
GATCTCGGCCAGCACATTCTGAAAAACCCTGGCGTGGCTCAACGAATTGT
TGACAAAGCCGAGTTGAAACAGAGCGATATCTCTTCTCCCCTCACATTTA
AACTTCTCGCGACGTCTCCGGCGCCCCGCATTTGTGTTCTCATGTTTCAA
CGAGAATTTGCTCTAAGGTTATTCGCGAAGCCGGGCGATAAGCTCTACAG
TCGACTCTCCGTCAATGCTCAGATGTGGGCTAAGATCGACCACATCATGA
AGGTGGGCAAGAACAATTTCAAGCCCCCACCGCTGGTCGAGTCGAGCGTT
GTCCGTCTGGTACCTAAGAACCCCAGGCCACAGATCAACTACGATGAGTG
GGACGGGCTTCTGAGAATTCTATTCGTCCGGAAGAACAAGACAATTCGGT
CAAGTTTCCTTGGCAAGTCCACGGTCATGGATATGTTGGAAGCCAACTAT
CGAACATGGTGTGCGCAAAACGATATCCCAGTTGAGGATGGGCCGGCGGA
AGGCGCCGAATCTGATGCGATGGACATTGGCAACGCGCAAGATGAGGATG
ATGATGAGGGTGAAGACGAGCCTGACGAGGGCATGGACGTGGACGACGAA
GATGACGTACCCGACTTCTTCAAGGAACAGACGAACGCGCGTATTCAAGA
GGCTCTTAAGAATCGGCCTAGTCGTAAGAAGAAGGGAAAGGTAGCAGAGC
TCGTCCGGGAGAAGGTACGGCAGGTGTTGGAAGATGAAACACGCCTTGCG
GACAAGCGTGCAAGGATGTGCGATGAGAACGACTTCCTGAAGTTATTGTG
GGCCTTCAACCAGAAGGGCTTCCATTTCAGCTGAGTTGTTCTGGAAATTG
GTCCTGGTACCGGTAACTTGACCGTGAAGATCCTCGAACAGGCGAAAAAA
GTTATCGCCGTTGAGCTCGACCCTCGAATGGCTGCCGAAGTCACCAAGCG
TGTTCAAGGCACGCCTGCCCAGAAACGCTTAGACGTTATCCTTGGAGATG
TGATCAAAACAGACCTTCCATATTTCGATGTTTGCATCAGCAACACGCCG
TATCAGATGCCCAAGGTCAAACAGCAGAAGCGCAATAGCGCTTCGAAGGC
CAGTCCCTATGCCGATGCGGCGGCAAAGACGAAGGCCGCCAACACCGTCT
TCAAGATGAATACCGATCTCGGCCAGCACATTCTGAAAAACCCTGGCGTG
GCTCAACGAATTGTTGACAAAGCCGAGTTGAAACAGAGCGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008649rRNA methyltransferase activity
GO:0000179rRNA (adenine-N6,N6-)-dimethyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
GO:0000154rRNA modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005400KJC3_005400Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005400-T1KJC3_005400-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005400-T1.cdsKJC3_005400-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005400-T1.exon3KJC3_005400-T1.exon3Aspergillus niger KJC3exon
KJC3_005400-T1.exon2KJC3_005400-T1.exon2Aspergillus niger KJC3exon
KJC3_005400-T1.exon1KJC3_005400-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005400-T1.utr5p1KJC3_005400-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263720
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR020596
DBxrefInterPro:IPR001737
DBxrefInterPro:IPR011530
DBxrefInterPro:IPR020598
DBxrefPFAM:PF00398
DBxrefPFAM:PF13649
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2613598..2615018 -
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