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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2625757..2628055- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005404-T1 ID=KJC3_005404-T1|Name=KJC3_005404-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2299bp|location=Sequence derived from alignment at ch4:2625757..2628055- (Aspergillus niger KJC3)
GTCCAGTCAACCACGGCAGCATCCGCGGCCCATGTGTTTCGGCGGCACCC
CCACCCATACGTCAACAGCCTAAACATCGCCGTGCTTCTTCTCCCCTTCT
CCTGTTTCCCTCACTCTTCTAGCCCTGATTGAATCCTACTTGTGTCTTTA
ATTATTTAGCGACGGACATTGCATGTAAGTAAAATCATGTCTATTATAAA
TGGTCTGCTAGCACCCCTTACCCGCTTGCTTTACTATCACCACTGCTAAC
AAGACCACCTAGAGTCCATCTGGGCTGCCAGCCCCTCCACCACCAGGGGT
CAGCCCACTCAGCTTTCTGCGGACGCCAAGGGCGAACGGATTGCATATGC
GGTATGGAATTAAATTTTCTGGCATCCATGCAAATAAAATATTCGTCAAT
GCTTACTGTTCCTTTCTCGAAATCTTCAGGCAAACAAATCGGTTTTCCTC
CGCTCGATTGACAACCCCGCCATCGCCAGGCAGTACACCGAACATAAGAC
GCAGACCACTGTTGCCCGCTTCTCACCCTCGGGCTTCTATGTTGCCAGTG
GTGATGCCAGTGGTATAGTGAGAGTCTGGGACTGTGTTGGAGAGGGTATC
ACCAAGGGCGAATACAGCATTGTGAATGGCCGGATCAATGATCTTGCCTG
GGATGGCGATTCCCAGCGCATCATTGCCGTCGGTGATGGAAAGCAGCGCT
ACGGCCACTGCATTACTTGGGATAGTGGTAATACTGTCGGAGAGATCTAT
GGCCACACCCAACAGATCAATTCCGTTTCGATCAGGCAGCAAAGGCCATT
GCGGGCCGCTGCTGCCGGTGACGACAAGAACCTAGTCTTCTACCACGGTG
CACCATTCAAGTTCAACACGGGAATCCGGGATAAGCACACCAACTATATC
TATGGAGTCGGCTTCAGCCCGGACGGCTCGACATTGGTCAGTGTTGGCGC
GGACCGCAAGATCTGGCTGTACGATGGCAAGACGGGAGAAGTCAGAGGCC
AGATTGGCGAAGGAGAGCACAACGGCAGCATTTTCGGCCTTTCGTGGTCT
AAGGACTCGCGGAAGTTTGCGACAGCCAGCGCAGACAAGACTGTCAAGAT
TTGGGACGTGGAAGCGGGCAAGGTTACCCAGAGTTGGAATATGGGAGAGG
AAGGAGCTGCGAATGTTAAGGACCAGCAGGTCGGAGTGGTCTGGCCTCAG
GGAAGAAGCGATGGCCTGCTGATCAGTCTTTCGTTGAGCGGCGACCTTAA
TTACCTAGTTGAAGGCACCCCGAAGCCCAGACAGGTCGTCCAGGGACACC
AGAAGAACATCACGTCCTTGACCCAGTCTCGCTCTGGCAGCGATGCTGAG
ACCCTGTGGACTGGAAGTTTTGACGGCCGGGTCTGCAGCTGGGATGTTCC
CACTGGGGCTGCGGAAGAAATGGAAGGCGACAGCCACACGACCTATATTG
CAGGTCTCGCGCCTACACAGGAAGGCAATGGTCGGATCTACAGCGTCGCC
TGGGACGACACCATTCGCTCCGTGGATATAGGTGCCAAGACCTATACCGG
AATCTCTTCTAAGCTGTCGGGACAGCCCAAGGGCGTTGCAGCCGCAAATG
ACTTGGTGTTAGTGGGAGCGTCGGAGAGCGTTGAGATCTACAAGGACGGA
CAGAAGACTGGCGACTTCAAGCCTGATTTCCCCGTCACTGCGGTTGCGGC
TCATGGCAACGTTGCAGCTGTCGGAGGTGAAAATGCGACCGTACAGATCT
TGGATATTGCGGCCTCGAGCCTTTCCCCCAAGACTACCATCAAGGCTACG
CGGAATGCGGTGTCTGCCTTGTCTTTCTCATCCGACGGATCTCTCCTGGC
CGTGGGCGACTCTCGGGGTCGCATCCTTGTTTACAAGGTCGCAGACGGTA
GCCTTGTTACGGATCGTTGGACGGCGCACACCTCTCGAATTACTTCACTT
GCCTGGAACGAAGACAATGACCACCTGACCAGCGGGTCATTGGATACCAA
CATCTTCGTCTGGAGCTTGTCCAAGCCCGGCGACTGGCTTCAGGTGTCTA
ACGCTCACAAAGAAGGCGTGAACGGTGTTGCCTGGATCGCCGGGGGATCT
AAGATTGCCTCAGCCGGTGCTGATGCGGCAGTTAAGGTGTGGAAAGTGGA
AGGTCTCAATTAGAGATGGGGGCCGACTTATAGAGAGTATATGCCAAGTG
TATAGTGAACGTTGAGGTTTTGGCTGGTCCACAATGTATTTGCTTTTCCT
GGCTTTCTGAGTTCAAGTCATTATTCCGATGTTATCAGTTTGTAGGGAG back to topCoding sequence (CDS) from alignment at ch4:2625757..2628055- >KJC3_005404-T1 ID=KJC3_005404-T1|Name=KJC3_005404-T1|organism=Aspergillus niger KJC3|type=CDS|length=5517bp|location=Sequence derived from alignment at ch4:2625757..2628055- (Aspergillus niger KJC3)
GCAAACAAATCGGTTTTCCTCCGCTCGATTGACAACCCCGCCATCGCCAG
GCAGTACACCGAACATAAGACGCAGACCACTGTTGCCCGCTTCTCACCCT
CGGGCTTCTATGTTGCCAGTGGTGATGCCAGTGGTATAGTGAGAGTCTGG
GACTGTGTTGGAGAGGGTATCACCAAGGGCGAATACAGCATTGTGAATGG
CCGGATCAATGATCTTGCCTGGGATGGCGATTCCCAGCGCATCATTGCCG
TCGGTGATGGAAAGCAGCGCTACGGCCACTGCATTACTTGGGATAGTGGT
AATACTGTCGGAGAGATCTATGGCCACACCCAACAGATCAATTCCGTTTC
GATCAGGCAGCAAAGGCCATTGCGGGCCGCTGCTGCCGGTGACGACAAGA
ACCTAGTCTTCTACCACGGTGCACCATTCAAGTTCAACACGGGAATCCGG
GATAAGCACACCAACTATATCTATGGAGTCGGCTTCAGCCCGGACGGCTC
GACATTGGTCAGTGTTGGCGCGGACCGCAAGATCTGGCTGTACGATGGCA
AGACGGGAGAAGTCAGAGGCCAGATTGGCGAAGGAGAGCACAACGGCAGC
ATTTTCGGCCTTTCGTGGTCTAAGGACTCGCGGAAGTTTGCGACAGCCAG
CGCAGACAAGACTGTCAAGATTTGGGACGTGGAAGCGGGCAAGGTTACCC
AGAGTTGGAATATGGGAGAGGAAGGAGCTGCGAATGTTAAGGACCAGCAG
GTCGGAGTGGTCTGGCCTCAGGGAAGAAGCGATGGCCTGCTGATCAGTCT
TTCGTTGAGCGGCGACCTTAATTACCTAGTTGAAGGCACCCCGAAGCCCA
GACAGGTCGTCCAGGGACACCAGAAGAACATCACGTCCTTGACCCAGTCT
CGCTCTGGCAGCGATGCTGAGACCCTGTGGACTGGAAGTTTTGACGGCCG
GGTCTGCAGCTGGGATGTTCCCACTGGGGCTGCGGAAGAAATGGAAGGCG
ACAGCCACACGACCTATATTGCAGGTCTCGCGCCTACACAGGAAGGCAAT
GGTCGGATCTACAGCGTCGCCTGGGACGACACCATTCGCTCCGTGGATAT
AGGTGCCAAGACCTATACCGGAATCTCTTCTAAGCTGTCGGGACAGCCCA
AGGGCGTTGCAGCCGCAAATGACTTGGTGTTAGTGGGAGCGTCGGAGAGC
GTTGAGATCTACAAGGACGGACAGAAGACTGGCGACTTCAAGCCTGATTT
CCCCGTCACTGCGGTTGCGGCTCATGGCAACGTTGCAGCTGTCGGAGGTG
AAAATGCGACCGTACAGATCTTGGATATTGCGGCCTCGAGCCTTTCCCCC
AAGACTACCATCAAGGCTACGCGGAATGCGGTGTCTGCCTTGTCTTTCTC
ATCCGACGGATCTCTCCTGGCCGTGGGCGACTCTCGGGGTCGCATCCTTG
TTTACAAGGTCGCAGACGGTAGCCTTGTTACGGATCGTTGGACGGCGCAC
ACCTCTCGAATTACTTCACTTGCCTGGAACGAAGACAATGACCACCTGAC
CAGCGGGTCATTGGATACCAACATCTTCGTCTGGAGCTTGTCCAAGCCCG
GCGACTGGCTTCAGGTGTCTAACGCTCACAAAGAAGGCGTGAACGGTGTT
GCCTGGATCGCCGGGGGATCTAAGATTGCCTCAGCCGGTGCTGATGCGGC
AGTTAAGGTGTGGAAAGTGGAAGGTCTCAATTAGAGTCCATCTGGGCTGC
CAGCCCCTCCACCACCAGGGGTCAGCCCACTCAGCTTTCTGCGGACGCCA
AGGGCGAACGGATTGCATATGCGATGTCTATTATAAATGGCAAACAAATC
GGTTTTCCTCCGCTCGATTGACAACCCCGCCATCGCCAGGCAGTACACCG
AACATAAGACGCAGACCACTGTTGCCCGCTTCTCACCCTCGGGCTTCTAT
GTTGCCAGTGGTGATGCCAGTGGTATAGTGAGAGTCTGGGACTGTGTTGG
AGAGGGTATCACCAAGGGCGAATACAGCATTGTGAATGGCCGGATCAATG
ATCTTGCCTGGGATGGCGATTCCCAGCGCATCATTGCCGTCGGTGATGGA
AAGCAGCGCTACGGCCACTGCATTACTTGGGATAGTGGTAATACTGTCGG
AGAGATCTATGGCCACACCCAACAGATCAATTCCGTTTCGATCAGGCAGC
AAAGGCCATTGCGGGCCGCTGCTGCCGGTGACGACAAGAACCTAGTCTTC
TACCACGGTGCACCATTCAAGTTCAACACGGGAATCCGGGATAAGCACAC
CAACTATATCTATGGAGTCGGCTTCAGCCCGGACGGCTCGACATTGGTCA
GTGTTGGCGCGGACCGCAAGATCTGGCTGTACGATGGCAAGACGGGAGAA
GTCAGAGGCCAGATTGGCGAAGGAGAGCACAACGGCAGCATTTTCGGCCT
TTCGTGGTCTAAGGACTCGCGGAAGTTTGCGACAGCCAGCGCAGACAAGA
CTGTCAAGATTTGGGACGTGGAAGCGGGCAAGGTTACCCAGAGTTGGAAT
ATGGGAGAGGAAGGAGCTGCGAATGTTAAGGACCAGCAGGTCGGAGTGGT
CTGGCCTCAGGGAAGAAGCGATGGCCTGCTGATCAGTCTTTCGTTGAGCG
GCGACCTTAATTACCTAGTTGAAGGCACCCCGAAGCCCAGACAGGTCGTC
CAGGGACACCAGAAGAACATCACGTCCTTGACCCAGTCTCGCTCTGGCAG
CGATGCTGAGACCCTGTGGACTGGAAGTTTTGACGGCCGGGTCTGCAGCT
GGGATGTTCCCACTGGGGCTGCGGAAGAAATGGAAGGCGACAGCCACACG
ACCTATATTGCAGGTCTCGCGCCTACACAGGAAGGCAATGGTCGGATCTA
CAGCGTCGCCTGGGACGACACCATTCGCTCCGTGGATATAGGTGCCAAGA
CCTATACCGGAATCTCTTCTAAGCTGTCGGGACAGCCCAAGGGCGTTGCA
GCCGCAAATGACTTGGTGTTAGTGGGAGCGTCGGAGAGCGTTGAGATCTA
CAAGGACGGACAGAAGACTGGCGACTTCAAGCCTGATTTCCCCGTCACTG
CGGTTGCGGCTCATGGCAACGTTGCAGCTGTCGGAGGTGAAAATGCGACC
GTACAGATCTTGGATATTGCGGCCTCGAGCCTTTCCCCCAAGACTACCAT
CAAGGCTACGCGGAATGCGGTGTCTGCCTTGTCTTTCTCATCCGACGGAT
CTCTCCTGGCCGTGGGCGACTCTCGGGGTCGCATCCTTGTTTACAAGGTC
GCAGACGGTAGCCTTGTTACGGATCGTTGGACGGCGCACACCTCTCGAAT
TACTTCACTTGCCTGGAACGAAGACAATGACCACCTGACCAGCGGGTCAT
TGGATACCAACATCTTCGTCTGGAGCTTGTCCAAGCCCGGCGACTGGCTT
CAGGTGTCTAACGCTCACAAAGAAGGCGTGAACGGTGTTGCCTGGATCGC
CGGGGGATCTAAGATTGCCTCAGCCGGTGCTGATGCGGCAGTTAAGGTGT
GGAAAGTGGAAGGTCTCAATTAGAGTCCATCTGGGCTGCCAGCCCCTCCA
CCACCAGGGGTCAGCCCACTCAGCTTTCTGCGGACGCCAAGGGCGAACGG
ATTGCATATGCGATGTCTATTATAAATGGCAAACAAATCGGTTTTCCTCC
GCTCGATTGACAACCCCGCCATCGCCAGGCAGTACACCGAACATAAGACG
CAGACCACTGTTGCCCGCTTCTCACCCTCGGGCTTCTATGTTGCCAGTGG
TGATGCCAGTGGTATAGTGAGAGTCTGGGACTGTGTTGGAGAGGGTATCA
CCAAGGGCGAATACAGCATTGTGAATGGCCGGATCAATGATCTTGCCTGG
GATGGCGATTCCCAGCGCATCATTGCCGTCGGTGATGGAAAGCAGCGCTA
CGGCCACTGCATTACTTGGGATAGTGGTAATACTGTCGGAGAGATCTATG
GCCACACCCAACAGATCAATTCCGTTTCGATCAGGCAGCAAAGGCCATTG
CGGGCCGCTGCTGCCGGTGACGACAAGAACCTAGTCTTCTACCACGGTGC
ACCATTCAAGTTCAACACGGGAATCCGGGATAAGCACACCAACTATATCT
ATGGAGTCGGCTTCAGCCCGGACGGCTCGACATTGGTCAGTGTTGGCGCG
GACCGCAAGATCTGGCTGTACGATGGCAAGACGGGAGAAGTCAGAGGCCA
GATTGGCGAAGGAGAGCACAACGGCAGCATTTTCGGCCTTTCGTGGTCTA
AGGACTCGCGGAAGTTTGCGACAGCCAGCGCAGACAAGACTGTCAAGATT
TGGGACGTGGAAGCGGGCAAGGTTACCCAGAGTTGGAATATGGGAGAGGA
AGGAGCTGCGAATGTTAAGGACCAGCAGGTCGGAGTGGTCTGGCCTCAGG
GAAGAAGCGATGGCCTGCTGATCAGTCTTTCGTTGAGCGGCGACCTTAAT
TACCTAGTTGAAGGCACCCCGAAGCCCAGACAGGTCGTCCAGGGACACCA
GAAGAACATCACGTCCTTGACCCAGTCTCGCTCTGGCAGCGATGCTGAGA
CCCTGTGGACTGGAAGTTTTGACGGCCGGGTCTGCAGCTGGGATGTTCCC
ACTGGGGCTGCGGAAGAAATGGAAGGCGACAGCCACACGACCTATATTGC
AGGTCTCGCGCCTACACAGGAAGGCAATGGTCGGATCTACAGCGTCGCCT
GGGACGACACCATTCGCTCCGTGGATATAGGTGCCAAGACCTATACCGGA
ATCTCTTCTAAGCTGTCGGGACAGCCCAAGGGCGTTGCAGCCGCAAATGA
CTTGGTGTTAGTGGGAGCGTCGGAGAGCGTTGAGATCTACAAGGACGGAC
AGAAGACTGGCGACTTCAAGCCTGATTTCCCCGTCACTGCGGTTGCGGCT
CATGGCAACGTTGCAGCTGTCGGAGGTGAAAATGCGACCGTACAGATCTT
GGATATTGCGGCCTCGAGCCTTTCCCCCAAGACTACCATCAAGGCTACGC
GGAATGCGGTGTCTGCCTTGTCTTTCTCATCCGACGGATCTCTCCTGGCC
GTGGGCGACTCTCGGGGTCGCATCCTTGTTTACAAGGTCGCAGACGGTAG
CCTTGTTACGGATCGTTGGACGGCGCACACCTCTCGAATTACTTCACTTG
CCTGGAACGAAGACAATGACCACCTGACCAGCGGGTCATTGGATACCAAC
ATCTTCGTCTGGAGCTTGTCCAAGCCCGGCGACTGGCTTCAGGTGTCTAA
CGCTCACAAAGAAGGCGTGAACGGTGTTGCCTGGATCGCCGGGGGATCTA
AGATTGCCTCAGCCGGTGCTGATGCGGCAGTTAAGGTGTGGAAAGTGGAA
GGTCTCAATTAGAGTCCATCTGGGCTGCCAGCCCCTCCACCACCAGGGGT
CAGCCCACTCAGCTTTCTGCGGACGCCAAGGGCGAACGGATTGCATATGC
GATGTCTATTATAAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005404-T1.utr3p1 | KJC3_005404-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005404-T1.utr5p1 | KJC3_005404-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092619L1 |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR024977 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF12894 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2625757..2628055 - |
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