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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2660951..2663757- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005416-T1 ID=KJC3_005416-T1|Name=KJC3_005416-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2807bp|location=Sequence derived from alignment at ch4:2660951..2663757- (Aspergillus niger KJC3)
CGCGCCTTTCTTGTCTCTGCCTCTCGCTCTTCTGTCTTTCCCTTCCCAAA
GTTCCCACTTCTTGTTTCCCTCCCACCTTTTGCGACTTCGAACCTTCCCC
AACCCCCTCTCTTTTTCTCTTCTTCCCTATCCCTCACCCCCCCCATTTTC
GCATCCCACTATCGCCAATCCCTTTTTGGCTTCCTTCTTGTTTCCCCTCC
AACCATCCGTTGTAGGGCGTGTTTGTCTCTTCACGGTCGCATCTTGCGCG
ATCCTTTATTCCTCAACCAAGCTACCCGTCATCGGATTGTCGGGAACCAT
ACTGTGGACTCCTCCCTCGCTCACTGCCCGTAGGGGGCCGAGCACCCGTC
GCTGATCCTTTTTGTTTTCTGGATACGGCGCGCGTCCCCAGGCGTTTTGG
TTGCCCGGGACTTCCACCACCACCAAACAGCCACCGCTCTGGGTGGGGTA
TTCGTCTTACTGCACTGTCTCTTGTCTTCTTGGATCTGTTTCTTGCGACA
CTTAGCTCTTGGTTTGATTTATCTCCCCTGCTCTCCCCGCCACCATGTTC
TACTCGGAGACCCTGTTGTCGAAGACCGGGCCACTGGCCCGCGTCTGGTT
GTCGGCCAACCTGGAGCGCAAGCTTTCCAAGTCGCACATCTTACAATCCG
ACATTGAAAGTAGTGTCAGTGCGATCGTGGACCAAGGCCAAGCCCCCATG
GCTTTGCGATTGAGCGGTCAACTGCTCCTGGGTGTGGTTCGCATCTACAG
CCGCAAAGCGCGCTATCTGCTGGATGACTGCAATGAGGCCCTGATGAAGA
TCAAAATGGTCGGTGCTACTTGGTTCCCCCTCTCTTGCATATTCCGGCCC
CTCCGTCGCTGACTACTCTTCCTCACATAGGCCTTTCGTTTGACGAACAA
CAATGACTTGACCACTACGGTCGTTGCCCCTGGCGGCATCACTTTGCCCG
ATGTACTGACGGAATCCGACTTGTTTATGAATCTGGATTCCTCCCTTCTG
TTGCCGCAAACCCTCAACCTCGAGCCCGAGGGTAAGCGGCCTGGTTCTTC
GATGGATTTCGGTAGTCAGCTGCTCCCCGATACTGGCTTGCGCCGCTCCG
CATCGCAAGAACCTGCGCGCCTCGAGGATCACACCCTGGTCGACTTGGAT
TTGGGAGAAGATGAAACACCTCTCGGCCATGACTTCAGCATGGAAGTCGG
TCGAGATGCCCCGGCTCCCCGCCCCGTGGAGGAAGATCTTTTCAGCGATG
GGGGCAAATTCAACGATGTCGACAACCTGCAACTGGACCTTGGTGAAGAT
GATGCTCCCCTGGATAAGATGGATCTGGGCGACGACGCTCTACCCGATAA
CCTTCTGCAAACGGATGACGCCATGGACCTCGGCGATGATCATGACGAGC
CTGCCCCCAATGCCGACGATGAGCTGGAACGCGAGAGTGCCCTGAGCTCC
ATGGCGGACGATGATCTAGACGACCTTGAAAAGTCTCAAGCGTTCGAATT
AGACGTGAATGACGTGAATGACGAAGATGATGAGGTTACTGCCAAGCATG
CTCAACCGCCAAAGCGCCGCAAGGTCGTTCTCATGGCACTGGACAAGGAG
ACCGACCAAAAGGTCAAGGATGTCAGAGAACAATACTTGACGCGCGAGGA
GATCATGAAGCCCTCTTCATGGCTGCCCCGGGACCCCGTGCTGCTGACCC
TGATGAACATGCAGAAGAACGGAGACTTTGTATCGAATGTGCTCGGTGCG
GGCCGAGGACGTGGCTGGGCTCCCGAATTGCGTGACTTGCTTTCCTTCGA
TACCATCCGGAAGGCGGGCGAGCTGAAGCGGAAGCGCGACAGTGGAATCG
CCGATATGGATGTGGATGCGGCCACTGCGCCGGCCCTGGAGCTAGGCGAA
GAAGAGGCCATTGTGCCGGTCGATGAGGGAGTTGGTCTTGACTCGACTCT
GCTCCAACGCTCCGAAATCGAGTTCCCCGGTGACGAGGAGGACCAGGCTC
TGCGTCTGAGTGACGACGAAGGAATGAACCAACCATTGGAGGATGCCGAC
GACACGATCGTGGCCGACAGTGGTCCCGTGTCGATCGGTACGAAGCACGC
CGTCCACATCCTTCGGGAGCGCCTGGGTGAATCTGCGGCCGAGCAGAAGA
AGAGCGTGAAGTTCCAGGATTTGCTTCCGGAGAAGAAGGCATCCAAGGCG
GACGCCACCAAGATGTTCTTCGAGGTCCTCGTGCTGGCCACCAAGGACGC
TGTACAAGTTGAACAACGACCGGAGACCGTGGGTGGACCTCTCAAGATCC
GTGGCAAACGAGCCCTCTGGGGCTCGTGGGCTGAGGAAGGGGCCAGCGGG
GAGGCAGAGCAGCAGCCCGTTGAGGCCACCGCCTAAAGGACCTGATGACT
CCGGCGTCGTGTTTATGTACAGTTGCGTTCTCTATGAAATTTTGTTTTCG
TGTGGGCAGGGTTGCCCCGGGAATCTCTTGGCTTTTGTACGGGGCGATTA
TCCTGTGTGTATTCTTTGGAGTTTTAGGGGTCTGGCTTTTAACTTTCTCT
TAACTCTCTTCTTCTTCTTCTTTTTCTTATTCTTCTTCAATTGTTGGAAC
TTGAATCTTTTCTTCCGGGACTGAAAAGGCGGCTATTATGATTCTGCTGG
AGGGCTGGGATTGATGCCCTGTTGATCGTTGGGCGAATTGGACCATAGGT
AGCTTAGTGTAATAGAAGAACTCGAATAAACCAGCCCAGCGATGCGCATG
GGATGTATCCCTCAGATTGTGCTTCAATCAGACAGAATCAAAAATTGATA
CTATCAA back to topCoding sequence (CDS) from alignment at ch4:2660951..2663757- >KJC3_005416-T1 ID=KJC3_005416-T1|Name=KJC3_005416-T1|organism=Aspergillus niger KJC3|type=CDS|length=3540bp|location=Sequence derived from alignment at ch4:2660951..2663757- (Aspergillus niger KJC3)
GCCTTTCGTTTGACGAACAACAATGACTTGACCACTACGGTCGTTGCCCC
TGGCGGCATCACTTTGCCCGATGTACTGACGGAATCCGACTTGTTTATGA
ATCTGGATTCCTCCCTTCTGTTGCCGCAAACCCTCAACCTCGAGCCCGAG
GGTAAGCGGCCTGGTTCTTCGATGGATTTCGGTAGTCAGCTGCTCCCCGA
TACTGGCTTGCGCCGCTCCGCATCGCAAGAACCTGCGCGCCTCGAGGATC
ACACCCTGGTCGACTTGGATTTGGGAGAAGATGAAACACCTCTCGGCCAT
GACTTCAGCATGGAAGTCGGTCGAGATGCCCCGGCTCCCCGCCCCGTGGA
GGAAGATCTTTTCAGCGATGGGGGCAAATTCAACGATGTCGACAACCTGC
AACTGGACCTTGGTGAAGATGATGCTCCCCTGGATAAGATGGATCTGGGC
GACGACGCTCTACCCGATAACCTTCTGCAAACGGATGACGCCATGGACCT
CGGCGATGATCATGACGAGCCTGCCCCCAATGCCGACGATGAGCTGGAAC
GCGAGAGTGCCCTGAGCTCCATGGCGGACGATGATCTAGACGACCTTGAA
AAGTCTCAAGCGTTCGAATTAGACGTGAATGACGTGAATGACGAAGATGA
TGAGGTTACTGCCAAGCATGCTCAACCGCCAAAGCGCCGCAAGGTCGTTC
TCATGGCACTGGACAAGGAGACCGACCAAAAGGTCAAGGATGTCAGAGAA
CAATACTTGACGCGCGAGGAGATCATGAAGCCCTCTTCATGGCTGCCCCG
GGACCCCGTGCTGCTGACCCTGATGAACATGCAGAAGAACGGAGACTTTG
TATCGAATGTGCTCGGTGCGGGCCGAGGACGTGGCTGGGCTCCCGAATTG
CGTGACTTGCTTTCCTTCGATACCATCCGGAAGGCGGGCGAGCTGAAGCG
GAAGCGCGACAGTGGAATCGCCGATATGGATGTGGATGCGGCCACTGCGC
CGGCCCTGGAGCTAGGCGAAGAAGAGGCCATTGTGCCGGTCGATGAGGGA
GTTGGTCTTGACTCGACTCTGCTCCAACGCTCCGAAATCGAGTTCCCCGG
TGACGAGGAGGACCAGGCTCTGCGTCTGAGTGACGACGAAGGAATGAACC
AACCATTGGAGGATGCCGACGACACGATCGTGGCCGACAGTGGTCCCGTG
TCGATCGGTACGAAGCACGCCGTCCACATCCTTCGGGAGCGCCTGGGTGA
ATCTGCGGCCGAGCAGAAGAAGAGCGTGAAGTTCCAGGATTTGCTTCCGG
AGAAGAAGGCATCCAAGGCGGACGCCACCAAGATGTTCTTCGAGGTCCTC
GTGCTGGCCACCAAGGACGCTGTACAAGTTGAACAACGACCGGAGACCGT
GGGTGGACCTCTCAAGATCCGTGGCAAACGAGCCCTCTGGGGCTCGTGGG
CTGAGGAAGGGGCCAGCGGGGAGGCAGAGCAGCAGCCCGTTGAGGCCACC
GCCTAAATGTTCTACTCGGAGACCCTGTTGTCGAAGACCGGGCCACTGGC
CCGCGTCTGGTTGTCGGCCAACCTGGAGCGCAAGCTTTCCAAGTCGCACA
TCTTACAATCCGACATTGAAAGTAGTGTCAGTGCGATCGTGGACCAAGGC
CAAGCCCCCATGGCTTTGCGATTGAGCGGTCAACTGCTCCTGGGTGTGGT
TCGCATCTACAGCCGCAAAGCGCGCTATCTGCTGGATGACTGCAATGAGG
CCCTGATGAAGATCAAAATGGCCTTTCGTTTGACGAACAACAATGACTTG
ACCACTACGGTCGTTGCCCCTGGCGGCATCACTTTGCCCGATGTACTGAC
GGAATCCGACTTGTTTATGAATCTGGATTCCTCCCTTCTGTTGCCGCAAA
CCCTCAACCTCGAGCCCGAGGGTAAGCGGCCTGGTTCTTCGATGGATTTC
GGTAGTCAGCTGCTCCCCGATACTGGCTTGCGCCGCTCCGCATCGCAAGA
ACCTGCGCGCCTCGAGGATCACACCCTGGTCGACTTGGATTTGGGAGAAG
ATGAAACACCTCTCGGCCATGACTTCAGCATGGAAGTCGGTCGAGATGCC
CCGGCTCCCCGCCCCGTGGAGGAAGATCTTTTCAGCGATGGGGGCAAATT
CAACGATGTCGACAACCTGCAACTGGACCTTGGTGAAGATGATGCTCCCC
TGGATAAGATGGATCTGGGCGACGACGCTCTACCCGATAACCTTCTGCAA
ACGGATGACGCCATGGACCTCGGCGATGATCATGACGAGCCTGCCCCCAA
TGCCGACGATGAGCTGGAACGCGAGAGTGCCCTGAGCTCCATGGCGGACG
ATGATCTAGACGACCTTGAAAAGTCTCAAGCGTTCGAATTAGACGTGAAT
GACGTGAATGACGAAGATGATGAGGTTACTGCCAAGCATGCTCAACCGCC
AAAGCGCCGCAAGGTCGTTCTCATGGCACTGGACAAGGAGACCGACCAAA
AGGTCAAGGATGTCAGAGAACAATACTTGACGCGCGAGGAGATCATGAAG
CCCTCTTCATGGCTGCCCCGGGACCCCGTGCTGCTGACCCTGATGAACAT
GCAGAAGAACGGAGACTTTGTATCGAATGTGCTCGGTGCGGGCCGAGGAC
GTGGCTGGGCTCCCGAATTGCGTGACTTGCTTTCCTTCGATACCATCCGG
AAGGCGGGCGAGCTGAAGCGGAAGCGCGACAGTGGAATCGCCGATATGGA
TGTGGATGCGGCCACTGCGCCGGCCCTGGAGCTAGGCGAAGAAGAGGCCA
TTGTGCCGGTCGATGAGGGAGTTGGTCTTGACTCGACTCTGCTCCAACGC
TCCGAAATCGAGTTCCCCGGTGACGAGGAGGACCAGGCTCTGCGTCTGAG
TGACGACGAAGGAATGAACCAACCATTGGAGGATGCCGACGACACGATCG
TGGCCGACAGTGGTCCCGTGTCGATCGGTACGAAGCACGCCGTCCACATC
CTTCGGGAGCGCCTGGGTGAATCTGCGGCCGAGCAGAAGAAGAGCGTGAA
GTTCCAGGATTTGCTTCCGGAGAAGAAGGCATCCAAGGCGGACGCCACCA
AGATGTTCTTCGAGGTCCTCGTGCTGGCCACCAAGGACGCTGTACAAGTT
GAACAACGACCGGAGACCGTGGGTGGACCTCTCAAGATCCGTGGCAAACG
AGCCCTCTGGGGCTCGTGGGCTGAGGAAGGGGCCAGCGGGGAGGCAGAGC
AGCAGCCCGTTGAGGCCACCGCCTAAATGTTCTACTCGGAGACCCTGTTG
TCGAAGACCGGGCCACTGGCCCGCGTCTGGTTGTCGGCCAACCTGGAGCG
CAAGCTTTCCAAGTCGCACATCTTACAATCCGACATTGAAAGTAGTGTCA
GTGCGATCGTGGACCAAGGCCAAGCCCCCATGGCTTTGCGATTGAGCGGT
CAACTGCTCCTGGGTGTGGTTCGCATCTACAGCCGCAAAGCGCGCTATCT
GCTGGATGACTGCAATGAGGCCCTGATGAAGATCAAAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005416-T1.utr3p1 | KJC3_005416-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005416-T1.utr5p1 | KJC3_005416-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926115V |
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR006909 |
| DBxref | InterPro:IPR023093 |
| DBxref | InterPro:IPR006910 |
| DBxref | PFAM:PF04825 |
| DBxref | PFAM:PF04824 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2660951..2663757 - |
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