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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2663976..2668149+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005417-T2 ID=KJC3_005417-T2|Name=KJC3_005417-T2|organism=Aspergillus niger KJC3|type=mRNA|length=4174bp|location=Sequence derived from alignment at ch4:2663976..2668149+ (Aspergillus niger KJC3)
CTCGGAACAACACGTCATCCGGTAAGGCTAGGCCGCATCGGGCAAGGCAT
CATCAGCCGCACCGCCCAAGGATGAAGCCGTCAATAGAAAGAAGCAAAGA
AATCCAAGGCGAAATCCAATGTATGAAGGAGAGGAGTCGATTGAAGGTTA
CCTGCTCCGAGTCATGATCAGGGTTTCTCAATAAGACAAGGTTTCTTTGT
ATTCTTATCGACAAAAGTACTAACTGCTGACCGGGTAGGTTTTATTCTCT
TCCCTCTCTTCTACTCTGCCCCGAAGTCTGGCCCAATCCTCCTCTCCCTT
CCCTGGTCTGGTCGCGCCGTGTCCACTTAGCGACTTTCCCCCCCATCTGG
GCTAACCAATTGACGATTATTGATGCAGTTACGGCCAGCTCGCGTCAAAC
CACCAGGAGAGACTGTGGCTTTGCCTTTTCGCCGGCCTTGTCGATTTTTC
CCCCCAAAGCAATTACTCTCACATCTCATTTCCTCTCCCCCCTGAAAAAA
GAACACCTCGCTCTCTTCGATTTTTATTATTCCTTCCTTACTGTTCCCGA
CGGGATGCTAGCAATTGGTGTCTGATATACCTGGGCTTATTTTCCGTTTC
GACAAAGCATGAGAGATGTCAAGGTCCGCAACGCCCGCGCTCCCTTTCCA
TAATGCCCAGATCCCCGATTCGAGACCGAGGTCGACAACCCCGGCGGACG
TGCGCTCCAGTCCTTCCCCTTCTGTAAGTGGCTTGCCCTGTCCAACTCGT
TGTCTCTCTTGCAATCTGTCCCCTCTGCCGTCTATGTACCTCCCGTCGGC
GCAGCTAACCGGAGCGCCTTGCGCGGATAGACGTCTACCTCGACATATTC
GCTCTTAGATCCGCAAGAGACCGCGGAGCGCTTACAGACCTCCCTCGTCC
ATGGCCTTAATCCCGCCGAGGCCGAGGTGCGCCTGGCACAAGAGGGACCC
AACGAACTCCCGCACGAAGAACCAGAGCCCATCTGGCTCCGCTTTCTCAA
GCAGTTTAAGGAGACCTTGATCCTCCTCCTTTTGGCCTCCGCTGCGATCT
CCTTTTTCATGGGAAACTATGACGATGCAGTCAGCATTACCCTCGCCGTC
ACAATCGTGGTCACCGTCGGATTCGTTCAGGAATATCGGTCGGAAAAGTC
TCTGGAGGCACTGAGTCGTCTGGTGCCGCACCATGCGCATCTAATTCGCG
ATGTTCCTTTGAATGGCCCTCCAGTGGCCGGCACCATTCCCCCGGCTCCT
GGTGCGGAGATGGAGTTGCAGGAGCTGCGAAGCAAGAGCCCATCCATTTC
CACCGCCGTCAAGGCCTCGACTACCGTGCCCGCCACGGAACTCGTGCCAG
GCGACTTGGTCCTCTTCACCGTCGGAGACCGCATTCCGGCAGACATAAGG
ATCACTGCCGCCACGGATCTCTCCATCGATGAGTCCAACTTGACAGGCGA
AAACGAACCGGTTGTCAAGTACCCCGATGCCATTCGCAGCCCCAAGCACC
TTCCGTCGCACTCCCCTAAGATTGTGAGCCCGCCTCGATCGCCATTTTAC
GATGCCCCGGCCAGTGGCGCCGTGGGAGCCGACATCCGCTTGAATGAACA
ACACAACATCGCTTTTATGGGTACGCTGGTTCGGTCGGGATACGGACAGG
GAATTGTGATCGGAACAGGTGCGAAGACGGAGTTTGGGAGCATTTCCGCC
TCCCTCCAGGAAATTGAAAGCCCGCGGACGCCTCTCCAGCTGTCAATGGA
CCGTTTGGGCCAGGAATTGAGTTACATCTCGTTCGGTGTCATCGGACTGA
TCGTTCTCATTGGTTTGATCCAGGGTCGCAAGCTCCTCGAGATGTTCACC
ATCGGTGTTTCGCTCGCGGTGGCTGCGATTCCGGAAGGTCTCCCTATCAT
TGTCACCGTGACGCTGGCTTTGGGAGTGCTGCGCATGGCCAAGCGAGGAG
CTATCATGCGACGGCTGCCGAGTGTCGAGACGCTAGGCTCTGTAAACGTC
GTTTGCAGTGACAAGACCGGTACTCTGACTCTGAACCACATGACGGTTAC
CAAAATGTGGCACTTTGACTGCCCCGAGCCTTTTGAGGTCCATAATGATA
TTTCCTCCTTGACGCCCGGGCCTGCAGCGCGGACCGTTCTGCGAATCGGC
AACATTGCCAACAATGCCAGACTATCTCGCGTGCATGCTAACTCTCCAGC
TAGCGCCTCCTCTGCCGCGGTCTTGTCCTCCACGGACGACAGGGCTTCTG
GAAGTATCCGTAGCAGATGGGTTGGCCAGCCTACTGACGTGGCTATTCTG
GATTTGCTGGATACATTCGGCGAGGACGATGTGCGTGAGCGTATCAGCGC
CCGTGTCGCGGAAACTCCATTCAGTTCTGAGCGCAAATGGATGGGTGTAA
TCATTGGCAACGGCACCTCCGGTGACAATGTGGCCTATATCAAGGGAGCC
CTCGAGCAGGTATTGACCCGGTGCGATACTTACTTGACCAAGGATGGCCG
TGAGGTTATCCTGGATGAACCACGGCGCCAGTCGATAAGGCACGCAGCCG
AACATATGGCGGCAGAGGGCTTGCGGGTCTTGGCTTTCGCCAGTGGAGCA
GTTAGGGACACTTCGAGAGGAAGAGCGTTTGGCAGCAGATCGGGTACGCC
CGTGTCAAAGTCCAGCAGCCAGAGTGATGACGATGACCGGTACAATGGAC
TAGTCTTTGCGGGCTTGGTGGGCATGAACGACCCTCCGCGCAAGGATGTC
CACAAGTCCATCCGGCGTCTCATGGCTGGAGGAGTGCGGGTCATCATGAT
CACGGGAGATGCGGAGACGACCGCTGTGGCCATCGCGAAGAAACTAGGAA
TGCCGGTCAGTGACGCTCCCGGATCACGGCCTGTCATGAATGGGCATGAG
ATCGATCGGATGAGCACCCAGGAGCTCGCGCAAGCCATATCCTCGACCTC
GGTCTTTGCGCGCACCAGTCCGGACCATAAAATGAAGATTGTGCGTGCCT
TGCAATCCCGTGGCGATGTAGTGGCTATGACCGGCGATGGCGTGAACGAC
GCCCCGGCACTCAAGAAGGCGGACATTGGTATCTCGATGGGCAAGCTGGG
CACAGATGTCGCCAAGGAGGCCGCGGATATGATTTTGACAGACGACGACT
TCTCGACCATCTTGCGTGCCATTGAGCAGGGCAAGGGCATCTTCTACAAC
ATCCAGAATTTCATTACCTTTCAGCTCAGTACCAGTGTTGCTGCACTGAG
TCTCGTATTGCTGAGCACCACCTTGGGCTTCAAGAACCCGTTGAACGCCA
TGCAAATCCTATGGATCAGTGAGTTTATGTCGCCTTGCATGTCTGGAGCA
CTGCTAATTTCGAAATTTAGATATCCTCATGGATGGCCCCCCTGCGCAGT
CGCTAGGAGTGGAACCTGTTGATCCGTCCATCATGAACCGGCCACCCCGA
CCCCGGAATGCCCGCGTTCTCACAAGGCCGCTCGTTCAGCGGGTGCTCAC
CTCCGCGATGATGATCATGCTCGGCACTCTGGCCATCTACATCCACGAAA
TGGGCGACGCCGACGACACCGCCAACCCCGGCGTGCACTCCCGCGTGGTG
ACCGCCCACGACACCACGATGACCTTTACATGCTTCGTGCTGTTCGACAT
GTTCAACGCATTGACGTGCCGCAGCGAGGGCAAGTCGGTGCTCCGTGGCG
AGATCTCTCTCTTTGGAAACAAGATGTTCAACTACGCCGTTCTGGGCTCG
CTCGCGGGACAGGCGTGTGTGATTTACCTTCCCTTCTTGCAGCGCATCTT
CCAGACGGAGCCCCTGGGCTTTGGACATTTGTTCCGGCTGGTGTGTATTT
CGAGTACCGTATTTTGGGTTGATGAGGCCCGCAAGTATTATATGGCGTTG
AAACGACGGGGCACGGTGGGGGTAGGATACAGTGTCAATGTTTAATAGAT
TAGGTTATAGGCTATATGTATAGATGCTTTTCCTTATACTTTGATACCAG
TATCGGCGTTTCAGTTGGGCGATAAACAAAACATAAGGTAAGGCCAACCT
GGTTAGTGTCCGTCCGGCTTGTATGAGAGGGGAAAAGAGATGCAAAAAAA
GAATGACCTACGCAGGACTCGAACCTGCAATCTCTTGATCCGTAGTCAAG
CGCCTTACCATTGGGCCAGCAGGC back to topCoding sequence (CDS) from alignment at ch4:2663976..2668149+ >KJC3_005417-T2 ID=KJC3_005417-T2|Name=KJC3_005417-T2|organism=Aspergillus niger KJC3|type=CDS|length=5670bp|location=Sequence derived from alignment at ch4:2663976..2668149+ (Aspergillus niger KJC3)
ATGGGAAACTATGACGATGCAGTCAGCATTACCCTCGCCGTCACAATCGT
GGTCACCGTCGGATTCGTTCAGGAATATCGGTCGGAAAAGTCTCTGGAGG
CACTGAGTCGTCTGGTGCCGCACCATGCGCATCTAATTCGCGATGTTCCT
TTGAATGGCCCTCCAGTGGCCGGCACCATTCCCCCGGCTCCTGGTGCGGA
GATGGAGTTGCAGGAGCTGCGAAGCAAGAGCCCATCCATTTCCACCGCCG
TCAAGGCCTCGACTACCGTGCCCGCCACGGAACTCGTGCCAGGCGACTTG
GTCCTCTTCACCGTCGGAGACCGCATTCCGGCAGACATAAGGATCACTGC
CGCCACGGATCTCTCCATCGATGAGTCCAACTTGACAGGCGAAAACGAAC
CGGTTGTCAAGTACCCCGATGCCATTCGCAGCCCCAAGCACCTTCCGTCG
CACTCCCCTAAGATTGTGAGCCCGCCTCGATCGCCATTTTACGATGCCCC
GGCCAGTGGCGCCGTGGGAGCCGACATCCGCTTGAATGAACAACACAACA
TCGCTTTTATGGGTACGCTGGTTCGGTCGGGATACGGACAGGGAATTGTG
ATCGGAACAGGTGCGAAGACGGAGTTTGGGAGCATTTCCGCCTCCCTCCA
GGAAATTGAAAGCCCGCGGACGCCTCTCCAGCTGTCAATGGACCGTTTGG
GCCAGGAATTGAGTTACATCTCGTTCGGTGTCATCGGACTGATCGTTCTC
ATTGGTTTGATCCAGGGTCGCAAGCTCCTCGAGATGTTCACCATCGGTGT
TTCGCTCGCGGTGGCTGCGATTCCGGAAGGTCTCCCTATCATTGTCACCG
TGACGCTGGCTTTGGGAGTGCTGCGCATGGCCAAGCGAGGAGCTATCATG
CGACGGCTGCCGAGTGTCGAGACGCTAGGCTCTGTAAACGTCGTTTGCAG
TGACAAGACCGGTACTCTGACTCTGAACCACATGACGGTTACCAAAATGT
GGCACTTTGACTGCCCCGAGCCTTTTGAGGTCCATAATGATATTTCCTCC
TTGACGCCCGGGCCTGCAGCGCGGACCGTTCTGCGAATCGGCAACATTGC
CAACAATGCCAGACTATCTCGCGTGCATGCTAACTCTCCAGCTAGCGCCT
CCTCTGCCGCGGTCTTGTCCTCCACGGACGACAGGGCTTCTGGAAGTATC
CGTAGCAGATGGGTTGGCCAGCCTACTGACGTGGCTATTCTGGATTTGCT
GGATACATTCGGCGAGGACGATGTGCGTGAGCGTATCAGCGCCCGTGTCG
CGGAAACTCCATTCAGTTCTGAGCGCAAATGGATGGGTGTAATCATTGGC
AACGGCACCTCCGGTGACAATGTGGCCTATATCAAGGGAGCCCTCGAGCA
GGTATTGACCCGGTGCGATACTTACTTGACCAAGGATGGCCGTGAGGTTA
TCCTGGATGAACCACGGCGCCAGTCGATAAGGCACGCAGCCGAACATATG
GCGGCAGAGGGCTTGCGGGTCTTGGCTTTCGCCAGTGGAGCAGTTAGGGA
CACTTCGAGAGGAAGAGCGTTTGGCAGCAGATCGGGTACGCCCGTGTCAA
AGTCCAGCAGCCAGAGTGATGACGATGACCGGTACAATGGACTAGTCTTT
GCGGGCTTGGTGGGCATGAACGACCCTCCGCGCAAGGATGTCCACAAGTC
CATCCGGCGTCTCATGGCTGGAGGAGTGCGGGTCATCATGATCACGGGAG
ATGCGGAGACGACCGCTGTGGCCATCGCGAAGAAACTAGGAATGCCGGTC
AGTGACGCTCCCGGATCACGGCCTGTCATGAATGGGCATGAGATCGATCG
GATGAGCACCCAGGAGCTCGCGCAAGCCATATCCTCGACCTCGGTCTTTG
CGCGCACCAGTCCGGACCATAAAATGAAGATTGTGCGTGCCTTGCAATCC
CGTGGCGATGTAGTGGCTATGACCGGCGATGGCGTGAACGACGCCCCGGC
ACTCAAGAAGGCGGACATTGGTATCTCGATGGGCAAGCTGGGCACAGATG
TCGCCAAGGAGGCCGCGGATATGATTTTGACAGACGACGACTTCTCGACC
ATCTTGCGTGCCATTGAGCAGGGCAAGGGCATCTTCTACAACATCCAGAA
TTTCATTACCTTTCAGCTCAGTACCAGTGTTGCTGCACTGAGTCTCGTAT
TGCTGAGCACCACCTTGGGCTTCAAGAACCCGTTGAACGCCATGCAAATC
CTATGGATCAATATCCTCATGGATGGCCCCCCTGCGCAGTCGCTAGGAGT
GGAACCTGTTGATCCGTCCATCATGAACCGGCCACCCCGACCCCGGAATG
CCCGCGTTCTCACAAGGCCGCTCGTTCAGCGGGTGCTCACCTCCGCGATG
ATGATCATGCTCGGCACTCTGGCCATCTACATCCACGAAATGGGCGACGC
CGACGACACCGCCAACCCCGGCGTGCACTCCCGCGTGGTGACCGCCCACG
ACACCACGATGACCTTTACATGCTTCGTGCTGTTCGACATGTTCAACGCA
TTGACGTGCCGCAGCGAGGGCAAGTCGGTGCTCCGTGGCGAGATCTCTCT
CTTTGGAAACAAGATGTTCAACTACGCCGTTCTGGGCTCGCTCGCGGGAC
AGGCGTGTGTGATTTACCTTCCCTTCTTGCAGCGCATCTTCCAGACGGAG
CCCCTGGGCTTTGGACATTTGTTCCGGCTGGTGTGTATTTCGAGTACCGT
ATTTTGGGTTGATGAGGCCCGCAAGTATTATATGGCGTTGAAACGACGGG
GCACGGTGGGGGTAGGATACAGTGTCAATGTTTAAATGGGAAACTATGAC
GATGCAGTCAGCATTACCCTCGCCGTCACAATCGTGGTCACCGTCGGATT
CGTTCAGGAATATCGGTCGGAAAAGTCTCTGGAGGCACTGAGTCGTCTGG
TGCCGCACCATGCGCATCTAATTCGCGATGTTCCTTTGAATGGCCCTCCA
GTGGCCGGCACCATTCCCCCGGCTCCTGGTGCGGAGATGGAGTTGCAGGA
GCTGCGAAGCAAGAGCCCATCCATTTCCACCGCCGTCAAGGCCTCGACTA
CCGTGCCCGCCACGGAACTCGTGCCAGGCGACTTGGTCCTCTTCACCGTC
GGAGACCGCATTCCGGCAGACATAAGGATCACTGCCGCCACGGATCTCTC
CATCGATGAGTCCAACTTGACAGGCGAAAACGAACCGGTTGTCAAGTACC
CCGATGCCATTCGCAGCCCCAAGCACCTTCCGTCGCACTCCCCTAAGATT
GTGAGCCCGCCTCGATCGCCATTTTACGATGCCCCGGCCAGTGGCGCCGT
GGGAGCCGACATCCGCTTGAATGAACAACACAACATCGCTTTTATGGGTA
CGCTGGTTCGGTCGGGATACGGACAGGGAATTGTGATCGGAACAGGTGCG
AAGACGGAGTTTGGGAGCATTTCCGCCTCCCTCCAGGAAATTGAAAGCCC
GCGGACGCCTCTCCAGCTGTCAATGGACCGTTTGGGCCAGGAATTGAGTT
ACATCTCGTTCGGTGTCATCGGACTGATCGTTCTCATTGGTTTGATCCAG
GGTCGCAAGCTCCTCGAGATGTTCACCATCGGTGTTTCGCTCGCGGTGGC
TGCGATTCCGGAAGGTCTCCCTATCATTGTCACCGTGACGCTGGCTTTGG
GAGTGCTGCGCATGGCCAAGCGAGGAGCTATCATGCGACGGCTGCCGAGT
GTCGAGACGCTAGGCTCTGTAAACGTCGTTTGCAGTGACAAGACCGGTAC
TCTGACTCTGAACCACATGACGGTTACCAAAATGTGGCACTTTGACTGCC
CCGAGCCTTTTGAGGTCCATAATGATATTTCCTCCTTGACGCCCGGGCCT
GCAGCGCGGACCGTTCTGCGAATCGGCAACATTGCCAACAATGCCAGACT
ATCTCGCGTGCATGCTAACTCTCCAGCTAGCGCCTCCTCTGCCGCGGTCT
TGTCCTCCACGGACGACAGGGCTTCTGGAAGTATCCGTAGCAGATGGGTT
GGCCAGCCTACTGACGTGGCTATTCTGGATTTGCTGGATACATTCGGCGA
GGACGATGTGCGTGAGCGTATCAGCGCCCGTGTCGCGGAAACTCCATTCA
GTTCTGAGCGCAAATGGATGGGTGTAATCATTGGCAACGGCACCTCCGGT
GACAATGTGGCCTATATCAAGGGAGCCCTCGAGCAGGTATTGACCCGGTG
CGATACTTACTTGACCAAGGATGGCCGTGAGGTTATCCTGGATGAACCAC
GGCGCCAGTCGATAAGGCACGCAGCCGAACATATGGCGGCAGAGGGCTTG
CGGGTCTTGGCTTTCGCCAGTGGAGCAGTTAGGGACACTTCGAGAGGAAG
AGCGTTTGGCAGCAGATCGGGTACGCCCGTGTCAAAGTCCAGCAGCCAGA
GTGATGACGATGACCGGTACAATGGACTAGTCTTTGCGGGCTTGGTGGGC
ATGAACGACCCTCCGCGCAAGGATGTCCACAAGTCCATCCGGCGTCTCAT
GGCTGGAGGAGTGCGGGTCATCATGATCACGGGAGATGCGGAGACGACCG
CTGTGGCCATCGCGAAGAAACTAGGAATGCCGGTCAGTGACGCTCCCGGA
TCACGGCCTGTCATGAATGGGCATGAGATCGATCGGATGAGCACCCAGGA
GCTCGCGCAAGCCATATCCTCGACCTCGGTCTTTGCGCGCACCAGTCCGG
ACCATAAAATGAAGATTGTGCGTGCCTTGCAATCCCGTGGCGATGTAGTG
GCTATGACCGGCGATGGCGTGAACGACGCCCCGGCACTCAAGAAGGCGGA
CATTGGTATCTCGATGGGCAAGCTGGGCACAGATGTCGCCAAGGAGGCCG
CGGATATGATTTTGACAGACGACGACTTCTCGACCATCTTGCGTGCCATT
GAGCAGGGCAAGGGCATCTTCTACAACATCCAGAATTTCATTACCTTTCA
GCTCAGTACCAGTGTTGCTGCACTGAGTCTCGTATTGCTGAGCACCACCT
TGGGCTTCAAGAACCCGTTGAACGCCATGCAAATCCTATGGATCAATATC
CTCATGGATGGCCCCCCTGCGCAGTCGCTAGGAGTGGAACCTGTTGATCC
GTCCATCATGAACCGGCCACCCCGACCCCGGAATGCCCGCGTTCTCACAA
GGCCGCTCGTTCAGCGGGTGCTCACCTCCGCGATGATGATCATGCTCGGC
ACTCTGGCCATCTACATCCACGAAATGGGCGACGCCGACGACACCGCCAA
CCCCGGCGTGCACTCCCGCGTGGTGACCGCCCACGACACCACGATGACCT
TTACATGCTTCGTGCTGTTCGACATGTTCAACGCATTGACGTGCCGCAGC
GAGGGCAAGTCGGTGCTCCGTGGCGAGATCTCTCTCTTTGGAAACAAGAT
GTTCAACTACGCCGTTCTGGGCTCGCTCGCGGGACAGGCGTGTGTGATTT
ACCTTCCCTTCTTGCAGCGCATCTTCCAGACGGAGCCCCTGGGCTTTGGA
CATTTGTTCCGGCTGGTGTGTATTTCGAGTACCGTATTTTGGGTTGATGA
GGCCCGCAAGTATTATATGGCGTTGAAACGACGGGGCACGGTGGGGGTAG
GATACAGTGTCAATGTTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0000166 | nucleotide binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005417-T2.utr5p1 | KJC3_005417-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005417-T2.utr3p1 | KJC3_005417-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036412 |
| DBxref | InterPro:IPR023299 |
| DBxref | InterPro:IPR008250 |
| DBxref | InterPro:IPR023298 |
| DBxref | InterPro:IPR018303 |
| DBxref | InterPro:IPR001757 |
| DBxref | InterPro:IPR006068 |
| DBxref | PFAM:PF00702 |
| DBxref | PFAM:PF00122 |
| DBxref | PFAM:PF00689 |
| DBxref | PFAM:PF13246 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2663976..2668149 + |
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