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KJC3_005422-T1, KJC3_005422-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005422-T1
Unique NameKJC3_005422-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2679361..2680609+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005422-T1 ID=KJC3_005422-T1|Name=KJC3_005422-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1249bp|location=Sequence derived from alignment at ch4:2679361..2680609+ (Aspergillus niger KJC3)
ATGGGCAACGAATCTTCGACCCTGATAGACGAGAAAACCCCCCCGTCGGT
GCTGGAGGCCCGTACCATCGAGGCGATTGCCAAATATGTCAAGCAAAAAC
CGGTGAAACGCGTGGTGGTGATGGTATGGACATTTCCCTCCGATTACCCC
TCCCCCGCACCGTGTCAGATCGAATTCTACATCCTCAAAGATTGACATAG
ATGGGGATATAGCTAACAGACAATTATATGTATAGGTCGGAGCTGGTATT
AGTACCTCGGCCGGAATTCCCGATTTCCGGTCGCCAGATACCGGCATCTA
CTCGAATCTCGCCCATTTGGACCTGCCCGATCCCGAAGCCGTCTTCGACA
TCAGTTTCTTCCGTCAGAATCCCCGCCCATTCTACGCTCTGGCCCGGGAA
TTGGCCCCGGGTCAGTTCCGACCCACCATCGCACACTCGTTCATCAAGCT
GCTCTACGACAAGGGAATGCTACTGAAGCATTTCTCACAGAACATTGACT
GTCTGGAGCGGCTGGCTGGGGTACCGGGTGATAAGATCGTCGAGGCCCAT
GGAAGCTTCGCGACACAGCATTGCATCGACTGCAAGGCGGAATACCCCGA
GGACTTGATGAAAAAGGCTATCACTAAGGGAAAGGTCCCGTACTGTACTC
AGTGCAAGGGGCTGGTGAAGCCCGACATTGTCTTCTTCGGAGAGTCGCTG
CCGGCTGACTTTTTCGACAACCGGGACCTTCCCGAGCAGGCGGACTTGTG
CATTGTTATGGGAACCAGTCTACAAGTGCAGCCGTTTGCCAGTCTGCCCG
CATTCGTTAGTGATGGAGTACCCCGCGTGCTGATCAACATGGAGCGGGTG
GGCGGGCTGGGATCCCGCCCGGACGATGTACTGGTGCTGGGTGATTGCGA
CACTGGGGTGAGGCGATTGGCACGGGCGCTGGGCTGGGGGGAGGAGTTAG
AGGAGCTGTGGGAGAGGACGAACCCGGACCCGGCCGCACGGGCGGCGGAG
AATGCATCCCCACAAACCCGGGAGGAGCGGCTGCAAGATGAAGTGGACCG
GCTCACGGAGGAGGTTGATCGCACGCTGGGAATCTCGCAGGCGTACCAGC
AGCGAGTGCGGCAGCATCTGGAGCGACAGTCGGGCACGCACGCGGATGCA
GCGGGTAGGAAGGAGAAGCAAGCCGAGGAGGAGAACGACCGGATTGGGGG
ATTGGCTCATGTCTTCCCGCATCTGGCGCGAATGCAGGAAGGGAGGTGA
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Coding sequence (CDS) from alignment at ch4:2679361..2680609+

>KJC3_005422-T1 ID=KJC3_005422-T1|Name=KJC3_005422-T1|organism=Aspergillus niger KJC3|type=CDS|length=2274bp|location=Sequence derived from alignment at ch4:2679361..2680609+ (Aspergillus niger KJC3)
ATGGGCAACGAATCTTCGACCCTGATAGACGAGAAAACCCCCCCGTCGGT
GCTGGAGGCCCGTACCATCGAGGCGATTGCCAAATATGTCAAGCAAAAAC
CGGTGAAACGCGTGGTGGTGATGGTCGGAGCTGGTATTAGTACCTCGGCC
GGAATTCCCGATTTCCGGTCGCCAGATACCGGCATCTACTCGAATCTCGC
CCATTTGGACCTGCCCGATCCCGAAGCCGTCTTCGACATCAGTTTCTTCC
GTCAGAATCCCCGCCCATTCTACGCTCTGGCCCGGGAATTGGCCCCGGGT
CAGTTCCGACCCACCATCGCACACTCGTTCATCAAGCTGCTCTACGACAA
GGGAATGCTACTGAAGCATTTCTCACAGAACATTGACTGTCTGGAGCGGC
TGGCTGGGGTACCGGGTGATAAGATCGTCGAGGCCCATGGAAGCTTCGCG
ACACAGCATTGCATCGACTGCAAGGCGGAATACCCCGAGGACTTGATGAA
AAAGGCTATCACTAAGGGAAAGGTCCCGTACTGTACTCAGTGCAAGGGGC
TGGTGAAGCCCGACATTGTCTTCTTCGGAGAGTCGCTGCCGGCTGACTTT
TTCGACAACCGGGACCTTCCCGAGCAGGCGGACTTGTGCATTGTTATGGG
AACCAGTCTACAAGTGCAGCCGTTTGCCAGTCTGCCCGCATTCGTTAGTG
ATGGAGTACCCCGCGTGCTGATCAACATGGAGCGGGTGGGCGGGCTGGGA
TCCCGCCCGGACGATGTACTGGTGCTGGGTGATTGCGACACTGGGGTGAG
GCGATTGGCACGGGCGCTGGGCTGGGGGGAGGAGTTAGAGGAGCTGTGGG
AGAGGACGAACCCGGACCCGGCCGCACGGGCGGCGGAGAATGCATCCCCA
CAAACCCGGGAGGAGCGGCTGCAAGATGAAGTGGACCGGCTCACGGAGGA
GGTTGATCGCACGCTGGGAATCTCGCAGGCGTACCAGCAGCGAGTGCGGC
AGCATCTGGAGCGACAGTCGGGCACGCACGCGGATGCAGCGGGTAGGAAG
GAGAAGCAAGCCGAGGAGGAGAACGACCGGATTGGGGGATTGGCTCATGT
CTTCCCGCATCTGGCGCGAATGCAGGAAGGGAGGTGAATGGGCAACGAAT
CTTCGACCCTGATAGACGAGAAAACCCCCCCGTCGGTGCTGGAGGCCCGT
ACCATCGAGGCGATTGCCAAATATGTCAAGCAAAAACCGGTGAAACGCGT
GGTGGTGATGGTCGGAGCTGGTATTAGTACCTCGGCCGGAATTCCCGATT
TCCGGTCGCCAGATACCGGCATCTACTCGAATCTCGCCCATTTGGACCTG
CCCGATCCCGAAGCCGTCTTCGACATCAGTTTCTTCCGTCAGAATCCCCG
CCCATTCTACGCTCTGGCCCGGGAATTGGCCCCGGGTCAGTTCCGACCCA
CCATCGCACACTCGTTCATCAAGCTGCTCTACGACAAGGGAATGCTACTG
AAGCATTTCTCACAGAACATTGACTGTCTGGAGCGGCTGGCTGGGGTACC
GGGTGATAAGATCGTCGAGGCCCATGGAAGCTTCGCGACACAGCATTGCA
TCGACTGCAAGGCGGAATACCCCGAGGACTTGATGAAAAAGGCTATCACT
AAGGGAAAGGTCCCGTACTGTACTCAGTGCAAGGGGCTGGTGAAGCCCGA
CATTGTCTTCTTCGGAGAGTCGCTGCCGGCTGACTTTTTCGACAACCGGG
ACCTTCCCGAGCAGGCGGACTTGTGCATTGTTATGGGAACCAGTCTACAA
GTGCAGCCGTTTGCCAGTCTGCCCGCATTCGTTAGTGATGGAGTACCCCG
CGTGCTGATCAACATGGAGCGGGTGGGCGGGCTGGGATCCCGCCCGGACG
ATGTACTGGTGCTGGGTGATTGCGACACTGGGGTGAGGCGATTGGCACGG
GCGCTGGGCTGGGGGGAGGAGTTAGAGGAGCTGTGGGAGAGGACGAACCC
GGACCCGGCCGCACGGGCGGCGGAGAATGCATCCCCACAAACCCGGGAGG
AGCGGCTGCAAGATGAAGTGGACCGGCTCACGGAGGAGGTTGATCGCACG
CTGGGAATCTCGCAGGCGTACCAGCAGCGAGTGCGGCAGCATCTGGAGCG
ACAGTCGGGCACGCACGCGGATGCAGCGGGTAGGAAGGAGAAGCAAGCCG
AGGAGGAGAACGACCGGATTGGGGGATTGGCTCATGTCTTCCCGCATCTG
GCGCGAATGCAGGAAGGGAGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0017136NAD-dependent histone deacetylase activity
GO:0008270zinc ion binding
GO:0070403NAD+ binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005422KJC3_005422Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005422-T1.exon1KJC3_005422-T1.exon1Aspergillus niger KJC3exon
KJC3_005422-T1.exon2KJC3_005422-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005422-T1.cdsKJC3_005422-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005422-T1KJC3_005422-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029035
DBxrefInterPro:IPR026590
DBxrefInterPro:IPR017328
DBxrefInterPro:IPR026591
DBxrefInterPro:IPR003000
DBxrefPFAM:PF02146
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2679361..2680609 +
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