You are here

Home

KJC3_005424-T1, KJC3_005424-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005424-T1
Unique NameKJC3_005424-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2683879..2684457+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005424-T1 ID=KJC3_005424-T1|Name=KJC3_005424-T1|organism=Aspergillus niger KJC3|type=mRNA|length=579bp|location=Sequence derived from alignment at ch4:2683879..2684457+ (Aspergillus niger KJC3)
ACCACCAAACCCCTCCATCTACTACTCTACCTAGCATACACAGTACCTCC
CAACCATGAGACTCGATACCCTCCTAACAACAACCCTCTGGGCCACTACA
GCCCTCGCCGCAGCCAAGCCCATCATAGAGAACCGAGACCTCGCCCCAGC
GACACCGGCAACAGCAACAATGCACACCCCCAACGCCGCAGCATCGGCTA
CACCCAGTTCTCGGGCGTCGGCTAGCGCCTCTGCCTCTGCGTCGGGTGCC
TCGGCGCAGTATGAGACGAGTAATGAGGGTGATGACGATGATGATTACGA
TGATGATGATGGTGGTCACGACGATGGTGACTACGAAGATTATGGTGATG
ATGGATATGGAAAGGAGGATCCCAAGGGGGGTGATGATGGTCAAGGGGAC
AAGGATAATAGTGATGTATGTATATACCCTTCCCCCCTACCCTCCAACTT
CTCTGTGTCAGACTATTCATTGTGTATGTGTATGTGGATGGGTGCTAATG
AGTGTGACTTGTGCAGCCGCTTGATTTCGTAAGTATCACCGGTGTCCTTC
CTGTTGAGGATTGCGTTGAAAAAGGGTAA
back to top

Coding sequence (CDS) from alignment at ch4:2683879..2684457+

>KJC3_005424-T1 ID=KJC3_005424-T1|Name=KJC3_005424-T1|organism=Aspergillus niger KJC3|type=CDS|length=846bp|location=Sequence derived from alignment at ch4:2683879..2684457+ (Aspergillus niger KJC3)
ATGAGACTCGATACCCTCCTAACAACAACCCTCTGGGCCACTACAGCCCT
CGCCGCAGCCAAGCCCATCATAGAGAACCGAGACCTCGCCCCAGCGACAC
CGGCAACAGCAACAATGCACACCCCCAACGCCGCAGCATCGGCTACACCC
AGTTCTCGGGCGTCGGCTAGCGCCTCTGCCTCTGCGTCGGGTGCCTCGGC
GCAGTATGAGACGAGTAATGAGGGTGATGACGATGATGATTACGATGATG
ATGATGGTGGTCACGACGATGGTGACTACGAAGATTATGGTGATGATGGA
TATGGAAAGGAGGATCCCAAGGGGGGTGATGATGGTCAAGGGGACAAGGA
TAATAGTGATCCGCTTGATTTCGTAAGTATCACCGGTGTCCTTCCTGTTG
AGGATTGCGTTGAAAAAGGGTAAATGAGACTCGATACCCTCCTAACAACA
ACCCTCTGGGCCACTACAGCCCTCGCCGCAGCCAAGCCCATCATAGAGAA
CCGAGACCTCGCCCCAGCGACACCGGCAACAGCAACAATGCACACCCCCA
ACGCCGCAGCATCGGCTACACCCAGTTCTCGGGCGTCGGCTAGCGCCTCT
GCCTCTGCGTCGGGTGCCTCGGCGCAGTATGAGACGAGTAATGAGGGTGA
TGACGATGATGATTACGATGATGATGATGGTGGTCACGACGATGGTGACT
ACGAAGATTATGGTGATGATGGATATGGAAAGGAGGATCCCAAGGGGGGT
GATGATGGTCAAGGGGACAAGGATAATAGTGATCCGCTTGATTTCGTAAG
TATCACCGGTGTCCTTCCTGTTGAGGATTGCGTTGAAAAAGGGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005424KJC3_005424Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005424-T1.utr5p1KJC3_005424-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005424-T1.exon1KJC3_005424-T1.exon1Aspergillus niger KJC3exon
KJC3_005424-T1.exon2KJC3_005424-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005424-T1.cdsKJC3_005424-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005424-T1KJC3_005424-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2683879..2684457 +
Powered by Drupal