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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2684969..2687203- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005425-T1 ID=KJC3_005425-T1|Name=KJC3_005425-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2235bp|location=Sequence derived from alignment at ch4:2684969..2687203- (Aspergillus niger KJC3)
AGAAAATTATTGTCGGCTTCGCTTTCTGCGATATACACCACCCCCTCTAT
CCACCCATTCAATTCTCTTCTAAACTCTGATCAATCAGAGAATACCTATC
TCACAATGCCGAAGGCGGCCGTTAAGCAAAAGTCTCGCCAGAAGGTCAAA
ACGGCCGCGCGCTCCCCTTTCGAACCAGGCCAACCCATTCGCGAAGCCAG
CGACATCGACATGTCCGACGATGAAACGAGCTCCGACGAGTCTTCGGTAC
CGGAGAAGGACGATGCCGAGAGGAAGCTTGAGGCGTTGCTCTTCGGCGAC
GATGAGGGATTTCTTGGCGCGTTGAAGAACCAGAAGGATCGCAGTTTAGT
ACTTGCGGGTCAGAGTAGCGATGAGGAGTCTGCGGAGGAGGGAGACGAGG
ATGAGGTGAAGGATCTGTCGCAGATGGATGATGCTGATGTTTGTTCTATC
TTTTTTTCAATCTTTTTTTTCCGTAACTCTGCTGGATGCTAACGAATGGG
CTGTGGTAGCTTTTCTTCCTTGATTCTGGCGCCGGACCGGTTTCTACGGA
CCTCAGCGAGGCGGCGCCCGCCGTGCCGTCGGATGAAGAGGGCAGTGAGG
AGGAGTCCGGTATGCCTGCGCTGTGGCATGATAGTGACGATGAGCGCATT
ACGATCTCCTTGGCGAGCCACCAGAGATTGAGGAAGCTGCGTGTTGCGGA
ATCGGAGGATGTCATTAGCGGAAAGGAGTATATTCGGCGCCTGCGCAGAC
AGTACTTGCAATTGAACCCGATGCCCGACTGGGCCAACCCGGAGAAGCAG
CAACAGAAGGACGATTCTGATGCGGACGAGATGGATACAGATGATGAGGA
GCCGACGTCCACGCAGCCGCTGGCTAAGTTGCTCCAGAACGCTACGGACC
TTGTCAACGTGGAGGAAAAGACGTCTGGCGGCCGCAGAAAGATGCGCCAG
GAGGTTGTGGATATCCAGCGTCTCAAGGACGTTGGCAAAGACCAGCCGGT
ATGTTTTCTGTTGCTAGGTTGCGCATCACTTCAATCTAACATAGTATACA
GTCCTCGGTCGATTCGCTCATGTTCCACCCCAACTACCCGCTGCTCCTCT
CCTCCGGACCTGCAGCCACGCTCTTCCTCCACCACATCTCCCCCTCCTCC
CCAGCCCCTAACCCGCTCCTCACCTCGTTCCACATCCGCAACACCCCCAT
CCACACCTCGGCCTTCCACACGCCGTCCGGCAACCGCATCTTCGCCTCCG
GCCGTCGCCGCTACTTCCACATCTGGGACCTGGAGACCGGCAAGGTGGAC
AAAGTCAACGGCACCGCCGACCGTAAAGAGGAGCAAAAGTCCATGGAGCG
ATTCAAACTCTCCCCCTGTGGCCGCTACGTCGGTCTGGTCGGCACCTCCC
GCAAGGGCGGCGGTCTTATCAACATCCTGGACTCCGGCACAGCGCAGTGG
ATCGCGCAGGTGCGCGTGGACGGCCGCGGCGGCGTGGCTGATTTCGCCTG
GTGGAGCGACGGCGAGGGTCTAACAGTGGCTAGCAAGAACGGTGAAGTGT
CCGAATGGGACGGCCGTCTCAACCGGGTCGTCGCGCGCTGGATGGACGCC
GGTGCCGTTGGCACGACGGTGCTCAGTCTGGGTGGTCGGTCCGGCCGCAC
TCAGCTGGGCGGGGACCGCTGGGTAGCGATTGGCAGTTCCAGTGGTGTGG
TCAACGTGTATGATCGTCGCGAATGGGCTGCGGCGTACGCGGCGCAGGGC
GAAGACGTCGAGGCTGGTCAGGCGGCGATTCCTCGTAACCCGGAGCCGGT
TCGGGCGCTCGATCAACTCACGACGCCGATCAGCCACTTGGTCTTTGCGC
CGGATGGACAGTTCTTCGTTATGGCGAGTCGGTGGAAGCGCGATGCGTTG
AGAATGGGTGAGCCTCATCCCCTAACTTCCCTGATCATAGACTGTGTAGA
AAGAATACTGACGATAGACAGTTCACCTCCCCACATGCACGGTATACCGC
AATTGGCCGACGTCGAATACGCCTCTGGGTCGCATCTCGTCGGTGGCTAT
CTCGCCCAACTCGGAGCAGTTGGCTGTGGGTAATGAGCAGGGACGGATCA
GGTTGTGGGAGATTAGGGGATGATTAATTATTCCTACTTGGTACTTTACA
GTAGCCATAAAAGTTATATACTGCATATTACGTGGAGTTAGTGTAGAGTA
GAATACCAGTGCAGATTCATTCAATCATATTGATG back to topCoding sequence (CDS) from alignment at ch4:2684969..2687203- >KJC3_005425-T1 ID=KJC3_005425-T1|Name=KJC3_005425-T1|organism=Aspergillus niger KJC3|type=CDS|length=7320bp|location=Sequence derived from alignment at ch4:2684969..2687203- (Aspergillus niger KJC3)
TTCACCTCCCCACATGCACGGTATACCGCAATTGGCCGACGTCGAATACG
CCTCTGGGTCGCATCTCGTCGGTGGCTATCTCGCCCAACTCGGAGCAGTT
GGCTGTGGGTAATGAGCAGGGACGGATCAGGTTGTGGGAGATTAGGGGAT
GATCCTCGGTCGATTCGCTCATGTTCCACCCCAACTACCCGCTGCTCCTC
TCCTCCGGACCTGCAGCCACGCTCTTCCTCCACCACATCTCCCCCTCCTC
CCCAGCCCCTAACCCGCTCCTCACCTCGTTCCACATCCGCAACACCCCCA
TCCACACCTCGGCCTTCCACACGCCGTCCGGCAACCGCATCTTCGCCTCC
GGCCGTCGCCGCTACTTCCACATCTGGGACCTGGAGACCGGCAAGGTGGA
CAAAGTCAACGGCACCGCCGACCGTAAAGAGGAGCAAAAGTCCATGGAGC
GATTCAAACTCTCCCCCTGTGGCCGCTACGTCGGTCTGGTCGGCACCTCC
CGCAAGGGCGGCGGTCTTATCAACATCCTGGACTCCGGCACAGCGCAGTG
GATCGCGCAGGTGCGCGTGGACGGCCGCGGCGGCGTGGCTGATTTCGCCT
GGTGGAGCGACGGCGAGGGTCTAACAGTGGCTAGCAAGAACGGTGAAGTG
TCCGAATGGGACGGCCGTCTCAACCGGGTCGTCGCGCGCTGGATGGACGC
CGGTGCCGTTGGCACGACGGTGCTCAGTCTGGGTGGTCGGTCCGGCCGCA
CTCAGCTGGGCGGGGACCGCTGGGTAGCGATTGGCAGTTCCAGTGGTGTG
GTCAACGTGTATGATCGTCGCGAATGGGCTGCGGCGTACGCGGCGCAGGG
CGAAGACGTCGAGGCTGGTCAGGCGGCGATTCCTCGTAACCCGGAGCCGG
TTCGGGCGCTCGATCAACTCACGACGCCGATCAGCCACTTGGTCTTTGCG
CCGGATGGACAGTTCTTCGTTATGGCGAGTCGGTGGAAGCGCGATGCGTT
GAGAATGGCTTTTCTTCCTTGATTCTGGCGCCGGACCGGTTTCTACGGAC
CTCAGCGAGGCGGCGCCCGCCGTGCCGTCGGATGAAGAGGGCAGTGAGGA
GGAGTCCGGTATGCCTGCGCTGTGGCATGATAGTGACGATGAGCGCATTA
CGATCTCCTTGGCGAGCCACCAGAGATTGAGGAAGCTGCGTGTTGCGGAA
TCGGAGGATGTCATTAGCGGAAAGGAGTATATTCGGCGCCTGCGCAGACA
GTACTTGCAATTGAACCCGATGCCCGACTGGGCCAACCCGGAGAAGCAGC
AACAGAAGGACGATTCTGATGCGGACGAGATGGATACAGATGATGAGGAG
CCGACGTCCACGCAGCCGCTGGCTAAGTTGCTCCAGAACGCTACGGACCT
TGTCAACGTGGAGGAAAAGACGTCTGGCGGCCGCAGAAAGATGCGCCAGG
AGGTTGTGGATATCCAGCGTCTCAAGGACGTTGGCAAAGACCAGCCGATG
CCGAAGGCGGCCGTTAAGCAAAAGTCTCGCCAGAAGGTCAAAACGGCCGC
GCGCTCCCCTTTCGAACCAGGCCAACCCATTCGCGAAGCCAGCGACATCG
ACATGTCCGACGATGAAACGAGCTCCGACGAGTCTTCGGTACCGGAGAAG
GACGATGCCGAGAGGAAGCTTGAGGCGTTGCTCTTCGGCGACGATGAGGG
ATTTCTTGGCGCGTTGAAGAACCAGAAGGATCGCAGTTTAGTACTTGCGG
GTCAGAGTAGCGATGAGGAGTCTGCGGAGGAGGGAGACGAGGATGAGGTG
AAGGATCTGTCGCAGATGGATGATGCTGATTTCACCTCCCCACATGCACG
GTATACCGCAATTGGCCGACGTCGAATACGCCTCTGGGTCGCATCTCGTC
GGTGGCTATCTCGCCCAACTCGGAGCAGTTGGCTGTGGGTAATGAGCAGG
GACGGATCAGGTTGTGGGAGATTAGGGGATGATCCTCGGTCGATTCGCTC
ATGTTCCACCCCAACTACCCGCTGCTCCTCTCCTCCGGACCTGCAGCCAC
GCTCTTCCTCCACCACATCTCCCCCTCCTCCCCAGCCCCTAACCCGCTCC
TCACCTCGTTCCACATCCGCAACACCCCCATCCACACCTCGGCCTTCCAC
ACGCCGTCCGGCAACCGCATCTTCGCCTCCGGCCGTCGCCGCTACTTCCA
CATCTGGGACCTGGAGACCGGCAAGGTGGACAAAGTCAACGGCACCGCCG
ACCGTAAAGAGGAGCAAAAGTCCATGGAGCGATTCAAACTCTCCCCCTGT
GGCCGCTACGTCGGTCTGGTCGGCACCTCCCGCAAGGGCGGCGGTCTTAT
CAACATCCTGGACTCCGGCACAGCGCAGTGGATCGCGCAGGTGCGCGTGG
ACGGCCGCGGCGGCGTGGCTGATTTCGCCTGGTGGAGCGACGGCGAGGGT
CTAACAGTGGCTAGCAAGAACGGTGAAGTGTCCGAATGGGACGGCCGTCT
CAACCGGGTCGTCGCGCGCTGGATGGACGCCGGTGCCGTTGGCACGACGG
TGCTCAGTCTGGGTGGTCGGTCCGGCCGCACTCAGCTGGGCGGGGACCGC
TGGGTAGCGATTGGCAGTTCCAGTGGTGTGGTCAACGTGTATGATCGTCG
CGAATGGGCTGCGGCGTACGCGGCGCAGGGCGAAGACGTCGAGGCTGGTC
AGGCGGCGATTCCTCGTAACCCGGAGCCGGTTCGGGCGCTCGATCAACTC
ACGACGCCGATCAGCCACTTGGTCTTTGCGCCGGATGGACAGTTCTTCGT
TATGGCGAGTCGGTGGAAGCGCGATGCGTTGAGAATGGCTTTTCTTCCTT
GATTCTGGCGCCGGACCGGTTTCTACGGACCTCAGCGAGGCGGCGCCCGC
CGTGCCGTCGGATGAAGAGGGCAGTGAGGAGGAGTCCGGTATGCCTGCGC
TGTGGCATGATAGTGACGATGAGCGCATTACGATCTCCTTGGCGAGCCAC
CAGAGATTGAGGAAGCTGCGTGTTGCGGAATCGGAGGATGTCATTAGCGG
AAAGGAGTATATTCGGCGCCTGCGCAGACAGTACTTGCAATTGAACCCGA
TGCCCGACTGGGCCAACCCGGAGAAGCAGCAACAGAAGGACGATTCTGAT
GCGGACGAGATGGATACAGATGATGAGGAGCCGACGTCCACGCAGCCGCT
GGCTAAGTTGCTCCAGAACGCTACGGACCTTGTCAACGTGGAGGAAAAGA
CGTCTGGCGGCCGCAGAAAGATGCGCCAGGAGGTTGTGGATATCCAGCGT
CTCAAGGACGTTGGCAAAGACCAGCCGATGCCGAAGGCGGCCGTTAAGCA
AAAGTCTCGCCAGAAGGTCAAAACGGCCGCGCGCTCCCCTTTCGAACCAG
GCCAACCCATTCGCGAAGCCAGCGACATCGACATGTCCGACGATGAAACG
AGCTCCGACGAGTCTTCGGTACCGGAGAAGGACGATGCCGAGAGGAAGCT
TGAGGCGTTGCTCTTCGGCGACGATGAGGGATTTCTTGGCGCGTTGAAGA
ACCAGAAGGATCGCAGTTTAGTACTTGCGGGTCAGAGTAGCGATGAGGAG
TCTGCGGAGGAGGGAGACGAGGATGAGGTGAAGGATCTGTCGCAGATGGA
TGATGCTGATTTCACCTCCCCACATGCACGGTATACCGCAATTGGCCGAC
GTCGAATACGCCTCTGGGTCGCATCTCGTCGGTGGCTATCTCGCCCAACT
CGGAGCAGTTGGCTGTGGGTAATGAGCAGGGACGGATCAGGTTGTGGGAG
ATTAGGGGATGATCCTCGGTCGATTCGCTCATGTTCCACCCCAACTACCC
GCTGCTCCTCTCCTCCGGACCTGCAGCCACGCTCTTCCTCCACCACATCT
CCCCCTCCTCCCCAGCCCCTAACCCGCTCCTCACCTCGTTCCACATCCGC
AACACCCCCATCCACACCTCGGCCTTCCACACGCCGTCCGGCAACCGCAT
CTTCGCCTCCGGCCGTCGCCGCTACTTCCACATCTGGGACCTGGAGACCG
GCAAGGTGGACAAAGTCAACGGCACCGCCGACCGTAAAGAGGAGCAAAAG
TCCATGGAGCGATTCAAACTCTCCCCCTGTGGCCGCTACGTCGGTCTGGT
CGGCACCTCCCGCAAGGGCGGCGGTCTTATCAACATCCTGGACTCCGGCA
CAGCGCAGTGGATCGCGCAGGTGCGCGTGGACGGCCGCGGCGGCGTGGCT
GATTTCGCCTGGTGGAGCGACGGCGAGGGTCTAACAGTGGCTAGCAAGAA
CGGTGAAGTGTCCGAATGGGACGGCCGTCTCAACCGGGTCGTCGCGCGCT
GGATGGACGCCGGTGCCGTTGGCACGACGGTGCTCAGTCTGGGTGGTCGG
TCCGGCCGCACTCAGCTGGGCGGGGACCGCTGGGTAGCGATTGGCAGTTC
CAGTGGTGTGGTCAACGTGTATGATCGTCGCGAATGGGCTGCGGCGTACG
CGGCGCAGGGCGAAGACGTCGAGGCTGGTCAGGCGGCGATTCCTCGTAAC
CCGGAGCCGGTTCGGGCGCTCGATCAACTCACGACGCCGATCAGCCACTT
GGTCTTTGCGCCGGATGGACAGTTCTTCGTTATGGCGAGTCGGTGGAAGC
GCGATGCGTTGAGAATGGCTTTTCTTCCTTGATTCTGGCGCCGGACCGGT
TTCTACGGACCTCAGCGAGGCGGCGCCCGCCGTGCCGTCGGATGAAGAGG
GCAGTGAGGAGGAGTCCGGTATGCCTGCGCTGTGGCATGATAGTGACGAT
GAGCGCATTACGATCTCCTTGGCGAGCCACCAGAGATTGAGGAAGCTGCG
TGTTGCGGAATCGGAGGATGTCATTAGCGGAAAGGAGTATATTCGGCGCC
TGCGCAGACAGTACTTGCAATTGAACCCGATGCCCGACTGGGCCAACCCG
GAGAAGCAGCAACAGAAGGACGATTCTGATGCGGACGAGATGGATACAGA
TGATGAGGAGCCGACGTCCACGCAGCCGCTGGCTAAGTTGCTCCAGAACG
CTACGGACCTTGTCAACGTGGAGGAAAAGACGTCTGGCGGCCGCAGAAAG
ATGCGCCAGGAGGTTGTGGATATCCAGCGTCTCAAGGACGTTGGCAAAGA
CCAGCCGATGCCGAAGGCGGCCGTTAAGCAAAAGTCTCGCCAGAAGGTCA
AAACGGCCGCGCGCTCCCCTTTCGAACCAGGCCAACCCATTCGCGAAGCC
AGCGACATCGACATGTCCGACGATGAAACGAGCTCCGACGAGTCTTCGGT
ACCGGAGAAGGACGATGCCGAGAGGAAGCTTGAGGCGTTGCTCTTCGGCG
ACGATGAGGGATTTCTTGGCGCGTTGAAGAACCAGAAGGATCGCAGTTTA
GTACTTGCGGGTCAGAGTAGCGATGAGGAGTCTGCGGAGGAGGGAGACGA
GGATGAGGTGAAGGATCTGTCGCAGATGGATGATGCTGATTTCACCTCCC
CACATGCACGGTATACCGCAATTGGCCGACGTCGAATACGCCTCTGGGTC
GCATCTCGTCGGTGGCTATCTCGCCCAACTCGGAGCAGTTGGCTGTGGGT
AATGAGCAGGGACGGATCAGGTTGTGGGAGATTAGGGGATGATCCTCGGT
CGATTCGCTCATGTTCCACCCCAACTACCCGCTGCTCCTCTCCTCCGGAC
CTGCAGCCACGCTCTTCCTCCACCACATCTCCCCCTCCTCCCCAGCCCCT
AACCCGCTCCTCACCTCGTTCCACATCCGCAACACCCCCATCCACACCTC
GGCCTTCCACACGCCGTCCGGCAACCGCATCTTCGCCTCCGGCCGTCGCC
GCTACTTCCACATCTGGGACCTGGAGACCGGCAAGGTGGACAAAGTCAAC
GGCACCGCCGACCGTAAAGAGGAGCAAAAGTCCATGGAGCGATTCAAACT
CTCCCCCTGTGGCCGCTACGTCGGTCTGGTCGGCACCTCCCGCAAGGGCG
GCGGTCTTATCAACATCCTGGACTCCGGCACAGCGCAGTGGATCGCGCAG
GTGCGCGTGGACGGCCGCGGCGGCGTGGCTGATTTCGCCTGGTGGAGCGA
CGGCGAGGGTCTAACAGTGGCTAGCAAGAACGGTGAAGTGTCCGAATGGG
ACGGCCGTCTCAACCGGGTCGTCGCGCGCTGGATGGACGCCGGTGCCGTT
GGCACGACGGTGCTCAGTCTGGGTGGTCGGTCCGGCCGCACTCAGCTGGG
CGGGGACCGCTGGGTAGCGATTGGCAGTTCCAGTGGTGTGGTCAACGTGT
ATGATCGTCGCGAATGGGCTGCGGCGTACGCGGCGCAGGGCGAAGACGTC
GAGGCTGGTCAGGCGGCGATTCCTCGTAACCCGGAGCCGGTTCGGGCGCT
CGATCAACTCACGACGCCGATCAGCCACTTGGTCTTTGCGCCGGATGGAC
AGTTCTTCGTTATGGCGAGTCGGTGGAAGCGCGATGCGTTGAGAATGGCT
TTTCTTCCTTGATTCTGGCGCCGGACCGGTTTCTACGGACCTCAGCGAGG
CGGCGCCCGCCGTGCCGTCGGATGAAGAGGGCAGTGAGGAGGAGTCCGGT
ATGCCTGCGCTGTGGCATGATAGTGACGATGAGCGCATTACGATCTCCTT
GGCGAGCCACCAGAGATTGAGGAAGCTGCGTGTTGCGGAATCGGAGGATG
TCATTAGCGGAAAGGAGTATATTCGGCGCCTGCGCAGACAGTACTTGCAA
TTGAACCCGATGCCCGACTGGGCCAACCCGGAGAAGCAGCAACAGAAGGA
CGATTCTGATGCGGACGAGATGGATACAGATGATGAGGAGCCGACGTCCA
CGCAGCCGCTGGCTAAGTTGCTCCAGAACGCTACGGACCTTGTCAACGTG
GAGGAAAAGACGTCTGGCGGCCGCAGAAAGATGCGCCAGGAGGTTGTGGA
TATCCAGCGTCTCAAGGACGTTGGCAAAGACCAGCCGATGCCGAAGGCGG
CCGTTAAGCAAAAGTCTCGCCAGAAGGTCAAAACGGCCGCGCGCTCCCCT
TTCGAACCAGGCCAACCCATTCGCGAAGCCAGCGACATCGACATGTCCGA
CGATGAAACGAGCTCCGACGAGTCTTCGGTACCGGAGAAGGACGATGCCG
AGAGGAAGCTTGAGGCGTTGCTCTTCGGCGACGATGAGGGATTTCTTGGC
GCGTTGAAGAACCAGAAGGATCGCAGTTTAGTACTTGCGGGTCAGAGTAG
CGATGAGGAGTCTGCGGAGGAGGGAGACGAGGATGAGGTGAAGGATCTGT
CGCAGATGGATGATGCTGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005425-T1.utr3p1 | KJC3_005425-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005425-T1.utr5p1 | KJC3_005425-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2684969..2687203 - |
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