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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2687314..2689078- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005426-T1 ID=KJC3_005426-T1|Name=KJC3_005426-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1765bp|location=Sequence derived from alignment at ch4:2687314..2689078- (Aspergillus niger KJC3)
CGCCCCATTCTCATCTTCCCATGAAACCCACTTAATTCCTAGCTTCTACC
CTGAGACCCTGGCTGGTTCCGGTTCCTTGCTGGTTAAGGAGGATCTGCCT
TCTTCGTCTATATTCACCGTCGCGCCCCTAATTCTGGTTGAAATCACTCC
CATCATCTACGAAGTCTGCCCCGGCCATATGCCCGTGACACGGACATCCC
TCGCAAGATAGGCACGCCGCCATCTTGCATCTCCGCAGGTCACTGGACTC
CCCTCAATTATCACCGCCACCAGCTGCTTGGCCTTGAAACTTCCTCGGAC
TCATTGCAATATCTTCTCGCAATAGCCTTTTTCTCCTTAATTTTGCTTCT
TATCGGTAATTTGGACGCAACATCGCCGCCATGGCCTTCACATCGCTTGC
CGGGCTAGTCATAACAACGGCTATCGCAGTCCTTAGTAGCGGTGTCGGTG
CGTCGGCGGTTGGTAGTCTGACTACTGCCTCCACCACCTCCATAAAGCCG
TCACCATCACCATCACCTACTATGCAAACTGTGCCTTTTCATCTAGCTGG
TCCAGATCCCACTGATGGAGACGACACCGGAGAATGCAGGCTCCTAGGGC
CCTTTTCGCTTCTCGTCCAAGCTGCGCTCGGAGCATTGGCGCTGCTATCA
CTTGTCTACAAGCGCTGGCGGGAGAGACCTCAGCGACCAGTGAAGGTGTG
GGCGTTTGATGTCTCGAAGCAAGTCTTTGGGTCCGCAATGCTGCACCTCG
CCAACCTGCTCATGTCTATGTTCTCTGCGGGCCAGCTCGAGATCCGGAGT
AAATACAAACCGAATCCATGCTCCTTCTACATATTGAACCTGGGAATCGA
TGTAAGCTTATCTCTACGCTCCATTATACGGGGTACGTGCTGACATGGTT
CGTTTTCAAGACCACGCTAGGCATCCCGATCCTCATTTTCATCCTTCACC
TCCTCAACCGCTTAGCTTCGTATACGCCCCTCGCCAATCCTCCGGAGTCT
ATCGAGTCTGGCAATTACGGAAGTCCACCGCGCGCCTCATGGTGGTTCAA
GCAATCGGTGATATATTTCATGGGACTGCTGGGGATGAAGATTTGCGTCT
TCTTCCTCATCCAGCTGCTGCCGTTCATCGTTAAAGTAGGAGATTGGGCT
CTCCGATGGACGGAAGGCAACACGGCAGTGCAGATCATCTTTGTCATGCT
GCTTTTCCCCGTCATTATGAATGCGATACAGTATTACATCATCGACACCT
TCATCAAGAAGCCGATAATGCTGGATACTCTCGAAGAGGCGGAGCATGAC
ACCCACGAACACCGCCATGCGCTCCTGGCGGGCATGGATGAGGACGCATC
GTTCGAGTCGGAGGATGACTCCGTTGGGAAAGATGATGGCCCGGAAACTG
TAAAAGAGGACCTAGTCCGGTTCGAGTCCGCCGAATACAATCCAGCTCAA
GTTGAGCACAGCTCTGCCGCGTCAGCCAGATCGGGTAGTAGTCACGGCGA
GTATGGCGATTTGTCATCGTCCACCAAGCTTACGTCCCAACATAAGGACT
GATATGATCTCCACTCACGTGTGTTATGTGGCGTTTGGTGATATTCTCAG
TGATTGTTCTATGGCAGTAGTGATCGGTGCATTTAGGGTTCTGGCAGGAT
GGCGTGTACATGATTTTACTTCAGCTGTTTGTATGTCTTTTTGTTTTGTC
TACTGCGCGTTATACACCAGCAACGCATACGTATAGCCTAAAATATGATT
AATTATAAGGTCGCC back to topCoding sequence (CDS) from alignment at ch4:2687314..2689078- >KJC3_005426-T1 ID=KJC3_005426-T1|Name=KJC3_005426-T1|organism=Aspergillus niger KJC3|type=CDS|length=2226bp|location=Sequence derived from alignment at ch4:2687314..2689078- (Aspergillus niger KJC3)
ACCACGCTAGGCATCCCGATCCTCATTTTCATCCTTCACCTCCTCAACCG
CTTAGCTTCGTATACGCCCCTCGCCAATCCTCCGGAGTCTATCGAGTCTG
GCAATTACGGAAGTCCACCGCGCGCCTCATGGTGGTTCAAGCAATCGGTG
ATATATTTCATGGGACTGCTGGGGATGAAGATTTGCGTCTTCTTCCTCAT
CCAGCTGCTGCCGTTCATCGTTAAAGTAGGAGATTGGGCTCTCCGATGGA
CGGAAGGCAACACGGCAGTGCAGATCATCTTTGTCATGCTGCTTTTCCCC
GTCATTATGAATGCGATACAGTATTACATCATCGACACCTTCATCAAGAA
GCCGATAATGCTGGATACTCTCGAAGAGGCGGAGCATGACACCCACGAAC
ACCGCCATGCGCTCCTGGCGGGCATGGATGAGGACGCATCGTTCGAGTCG
GAGGATGACTCCGTTGGGAAAGATGATGGCCCGGAAACTGTAAAAGAGGA
CCTAGTCCGGTTCGAGTCCGCCGAATACAATCCAGCTCAAGTTGAGCACA
GCTCTGCCGCGTCAGCCAGATCGGGTAGTAGTCACGGCGAGTATGGCGAT
TTGTCATCGTCCACCAAGCTTACGTCCCAACATAAGGACTGAATGGCCTT
CACATCGCTTGCCGGGCTAGTCATAACAACGGCTATCGCAGTCCTTAGTA
GCGGTGTCGGTGCGTCGGCGGTTGGTAGTCTGACTACTGCCTCCACCACC
TCCATAAAGCCGTCACCATCACCATCACCTACTATGCAAACTGTGCCTTT
TCATCTAGCTGGTCCAGATCCCACTGATGGAGACGACACCGGAGAATGCA
GGCTCCTAGGGCCCTTTTCGCTTCTCGTCCAAGCTGCGCTCGGAGCATTG
GCGCTGCTATCACTTGTCTACAAGCGCTGGCGGGAGAGACCTCAGCGACC
AGTGAAGGTGTGGGCGTTTGATGTCTCGAAGCAAGTCTTTGGGTCCGCAA
TGCTGCACCTCGCCAACCTGCTCATGTCTATGTTCTCTGCGGGCCAGCTC
GAGATCCGGAGTAAATACAAACCGAATCCATGCTCCTTCTACATATTGAA
CCTGGGAATCGATACCACGCTAGGCATCCCGATCCTCATTTTCATCCTTC
ACCTCCTCAACCGCTTAGCTTCGTATACGCCCCTCGCCAATCCTCCGGAG
TCTATCGAGTCTGGCAATTACGGAAGTCCACCGCGCGCCTCATGGTGGTT
CAAGCAATCGGTGATATATTTCATGGGACTGCTGGGGATGAAGATTTGCG
TCTTCTTCCTCATCCAGCTGCTGCCGTTCATCGTTAAAGTAGGAGATTGG
GCTCTCCGATGGACGGAAGGCAACACGGCAGTGCAGATCATCTTTGTCAT
GCTGCTTTTCCCCGTCATTATGAATGCGATACAGTATTACATCATCGACA
CCTTCATCAAGAAGCCGATAATGCTGGATACTCTCGAAGAGGCGGAGCAT
GACACCCACGAACACCGCCATGCGCTCCTGGCGGGCATGGATGAGGACGC
ATCGTTCGAGTCGGAGGATGACTCCGTTGGGAAAGATGATGGCCCGGAAA
CTGTAAAAGAGGACCTAGTCCGGTTCGAGTCCGCCGAATACAATCCAGCT
CAAGTTGAGCACAGCTCTGCCGCGTCAGCCAGATCGGGTAGTAGTCACGG
CGAGTATGGCGATTTGTCATCGTCCACCAAGCTTACGTCCCAACATAAGG
ACTGAATGGCCTTCACATCGCTTGCCGGGCTAGTCATAACAACGGCTATC
GCAGTCCTTAGTAGCGGTGTCGGTGCGTCGGCGGTTGGTAGTCTGACTAC
TGCCTCCACCACCTCCATAAAGCCGTCACCATCACCATCACCTACTATGC
AAACTGTGCCTTTTCATCTAGCTGGTCCAGATCCCACTGATGGAGACGAC
ACCGGAGAATGCAGGCTCCTAGGGCCCTTTTCGCTTCTCGTCCAAGCTGC
GCTCGGAGCATTGGCGCTGCTATCACTTGTCTACAAGCGCTGGCGGGAGA
GACCTCAGCGACCAGTGAAGGTGTGGGCGTTTGATGTCTCGAAGCAAGTC
TTTGGGTCCGCAATGCTGCACCTCGCCAACCTGCTCATGTCTATGTTCTC
TGCGGGCCAGCTCGAGATCCGGAGTAAATACAAACCGAATCCATGCTCCT
TCTACATATTGAACCTGGGAATCGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005426-T1.utr3p1 | KJC3_005426-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005426-T1.utr5p1 | KJC3_005426-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-24) |
| DBxref | InterPro:IPR022127 |
| DBxref | PFAM:PF12400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2687314..2689078 - |
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